RNA–Protein interactions for RNA: YKR004C

ECM9, Transcript of Non-essential protein of unknown function, yeastyeast

Gene ECM9, Length 1,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM9YKR004C MIF2P35201 549 aa11.28□□□□□ -0.6
ECM9YKR004C YEL023CP39992 682 aa11.28□□□□□ -0.6
ECM9YKR004C GRE2Q12068 342 aaKnown RBP11.27□□□□□ -0.61
ECM9YKR004C PTC4P38089 393 aa11.26□□□□□ -0.61
ECM9YKR004C SAP30P38429 201 aa11.24□□□□□ -0.61
ECM9YKR004C EDS1P38073 919 aa11.23□□□□□ -0.61
ECM9YKR004C YDL129WQ07555 291 aa11.23□□□□□ -0.61
ECM9YKR004C PTC3P34221 468 aaKnown RBP11.2□□□□□ -0.62
ECM9YKR004C ATH1P48016 1211 aa11.18□□□□□ -0.62
ECM9YKR004C COQ8P27697 501 aa11.17□□□□□ -0.62
ECM9YKR004C GUT1P32190 709 aa11.16□□□□□ -0.62
ECM9YKR004C CHL1P22516 861 aaPredicted RBP11.08□□□□□ -0.64
ECM9YKR004C PRE3P38624 215 aa11.06□□□□□ -0.64
ECM9YKR004C NST1P53935 1240 aa11.05□□□□□ -0.64
ECM9YKR004C PML39Q03760 334 aa11.05□□□□□ -0.64
ECM9YKR004C SOL3P38858 249 aa11.01□□□□□ -0.65
ECM9YKR004C BCK2P33306 851 aa10.99□□□□□ -0.65
ECM9YKR004C NOP53Q12080 455 aaKnown RBP10.99□□□□□ -0.65
ECM9YKR004C YDR344CQ05510 147 aa10.96□□□□□ -0.65
ECM9YKR004C AI4P03878 556 aa10.94□□□□□ -0.66
ECM9YKR004C MPH3P0CE00 602 aa10.94□□□□□ -0.66
ECM9YKR004C MID1P41821 548 aa10.92□□□□□ -0.66
ECM9YKR004C ELP4Q02884 456 aaKnown RBP10.91□□□□□ -0.66
ECM9YKR004C ILV3P39522 585 aaKnown RBP10.89□□□□□ -0.67
ECM9YKR004C YGR273CP53329 174 aa10.88□□□□□ -0.67
ECM9YKR004C ARH1P48360 493 aa10.86□□□□□ -0.67
ECM9YKR004C PEX29Q03370 554 aa10.83□□□□□ -0.68
ECM9YKR004C VRP1P37370 817 aa10.8□□□□□ -0.68
ECM9YKR004C SET1P38827 1080 aaKnown RBP10.76□□□□□ -0.69
ECM9YKR004C XDJ1P39102 459 aa10.74□□□□□ -0.69
ECM9YKR004C SPT23P35210 1082 aa10.73□□□□□ -0.69
ECM9YKR004C HAP5Q02516 242 aa10.73□□□□□ -0.69
ECM9YKR004C MPC54Q08550 464 aa10.72□□□□□ -0.69
ECM9YKR004C SLI15P38283 698 aa10.7□□□□□ -0.7
ECM9YKR004C BNI4P53858 892 aa10.67□□□□□ -0.7
ECM9YKR004C KEX1P09620 729 aa10.66□□□□□ -0.7
ECM9YKR004C NMA111P53920 997 aa10.63□□□□□ -0.71
ECM9YKR004C DPL1Q05567 589 aa10.62□□□□□ -0.71
ECM9YKR004C PTC2P39966 464 aaKnown RBP10.6□□□□□ -0.71
ECM9YKR004C YML082WQ04533 649 aaKnown RBP10.59□□□□□ -0.71
ECM9YKR004C YLR326WQ06170 240 aaKnown RBP10.58□□□□□ -0.72
ECM9YKR004C UBP14P38237 781 aaKnown RBP10.57□□□□□ -0.72
ECM9YKR004C VHR2P40041 505 aa10.56□□□□□ -0.72
ECM9YKR004C DPS1P04802 557 aaKnown RBP10.52□□□□□ -0.73
ECM9YKR004C CDC73Q06697 393 aa10.51□□□□□ -0.73
ECM9YKR004C IFH1P39520 1085 aa10.5□□□□□ -0.73
ECM9YKR004C ISU2Q12056 156 aa10.5□□□□□ -0.73
ECM9YKR004C PCS60P38137 543 aaKnown RBP RIP-Chip data10.49□□□□□ -0.73not detected
ECM9YKR004C RAD54P32863 898 aa10.48□□□□□ -0.73
ECM9YKR004C YPR015CQ12531 247 aa10.44□□□□□ -0.74
ECM9YKR004C RAM1P22007 431 aa10.42□□□□□ -0.74
ECM9YKR004C YPR148CQ06523 435 aa10.41□□□□□ -0.74
ECM9YKR004C YDR090CQ03193 310 aa10.4□□□□□ -0.74
ECM9YKR004C RPP1BP10622 106 aaKnown RBP10.38□□□□□ -0.75
ECM9YKR004C PDR1P12383 1068 aa10.35□□□□□ -0.75
ECM9YKR004C KIC1P38692 1080 aa10.35□□□□□ -0.75
ECM9YKR004C REF2P42073 533 aaPredicted RBP10.33□□□□□ -0.76
ECM9YKR004C GYP1Q08484 637 aa10.29□□□□□ -0.76
ECM9YKR004C VPS70P47161 811 aa10.28□□□□□ -0.76
ECM9YKR004C SRC1Q03707 834 aa10.27□□□□□ -0.77
ECM9YKR004C GAP1P19145 602 aaPredicted RBP10.25□□□□□ -0.77
ECM9YKR004C PEX21P50091 288 aa10.24□□□□□ -0.77
ECM9YKR004C RAS1P01119 309 aa10.23□□□□□ -0.77
ECM9YKR004C CSC1Q06538 782 aa10.22□□□□□ -0.77
ECM9YKR004C YRR1Q12172 810 aa10.22□□□□□ -0.77
ECM9YKR004C SAS4Q04003 481 aa10.21□□□□□ -0.77
ECM9YKR004C TFB4Q12004 338 aa10.21□□□□□ -0.77
ECM9YKR004C ORC6P38826 435 aa10.19□□□□□ -0.78
ECM9YKR004C MAK21Q12176 1025 aaKnown RBP10.19□□□□□ -0.78
ECM9YKR004C COX6P00427 148 aa10.17□□□□□ -0.78
ECM9YKR004C SDH2P21801 266 aa10.16□□□□□ -0.78
ECM9YKR004C AMS1P22855 1083 aa10.16□□□□□ -0.78
ECM9YKR004C TUM1Q08686 304 aaKnown RBP10.16□□□□□ -0.78
ECM9YKR004C BUD20Q08004 166 aaPredicted RBP10.15□□□□□ -0.78
ECM9YKR004C STR2P47164 639 aa10.14□□□□□ -0.79
ECM9YKR004C PRT1P06103 763 aaKnown RBP10.11□□□□□ -0.79
ECM9YKR004C NUD1P32336 851 aa10.11□□□□□ -0.79
ECM9YKR004C ISM1P48526 1002 aa10.1□□□□□ -0.79
ECM9YKR004C YEL077CQ3E7X8 1277 aa10.08□□□□□ -0.8
ECM9YKR004C MVP1P40959 511 aaKnown RBP10.07□□□□□ -0.8
ECM9YKR004C MRF1P30775 413 aaPredicted RBP10.06□□□□□ -0.8
ECM9YKR004C NPL4P33755 580 aa10.04□□□□□ -0.8
ECM9YKR004C CKB1P43639 278 aa10.03□□□□□ -0.8
ECM9YKR004C RGR1P19263 1082 aa10.02□□□□□ -0.81
ECM9YKR004C TRK1P12685 1235 aa10.01□□□□□ -0.81
ECM9YKR004C YPR109WQ06104 294 aa10□□□□□ -0.81
ECM9YKR004C PBS2P08018 668 aa9.99□□□□□ -0.81
ECM9YKR004C TY1A-DR4O74302 440 aa9.98□□□□□ -0.81
ECM9YKR004C TY1A-HP0C2I4 478 aaKnown RBP9.98□□□□□ -0.81
ECM9YKR004C TY1A-AP0CX57 440 aa9.98□□□□□ -0.81
ECM9YKR004C TY1A-PR1P0CX58 440 aa9.98□□□□□ -0.81
ECM9YKR004C TY1A-ORP0CX59 440 aa9.98□□□□□ -0.81
ECM9YKR004C TY1A-PR2P0CX60 440 aa9.98□□□□□ -0.81
ECM9YKR004C TY1A-DR5P0CX65 440 aa9.98□□□□□ -0.81
ECM9YKR004C TY1A-ER2P0CX66 440 aa9.98□□□□□ -0.81
ECM9YKR004C TY1A-GR3P0CX67 440 aa9.98□□□□□ -0.81
ECM9YKR004C TY1A-LR1P0CX68 440 aa9.98□□□□□ -0.81
ECM9YKR004C TY1A-MR2P0CX69 440 aa9.98□□□□□ -0.81
ECM9YKR004C TY1A-JR2P47099 440 aa9.98□□□□□ -0.81
ECM9YKR004C TY1A-DR1Q03856 440 aa9.98□□□□□ -0.81
Retrieved 100 of 5,963 RNA–protein pairs in 42.8 ms