RNA–Protein interactions for RNA: YJL053W

PEP8, Transcript of Vacuolar protein component of the retromer, yeastyeast

Gene PEP8, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP8YJL053W DCW1P36091 449 aa8.96□□□□□ -0.98
PEP8YJL053W PRE3P38624 215 aa8.95□□□□□ -0.98
PEP8YJL053W PTC4P38089 393 aa8.94□□□□□ -0.98
PEP8YJL053W RCR1P38212 213 aa8.93□□□□□ -0.98
PEP8YJL053W YEL023CP39992 682 aa8.93□□□□□ -0.98
PEP8YJL053W VRP1P37370 817 aa8.81□□□□□ -1
PEP8YJL053W XDJ1P39102 459 aa8.79□□□□□ -1
PEP8YJL053W ELP4Q02884 456 aaKnown RBP8.79□□□□□ -1
PEP8YJL053W PML39Q03760 334 aa8.78□□□□□ -1
PEP8YJL053W GRE2Q12068 342 aaKnown RBP8.76□□□□□ -1.01
PEP8YJL053W MIF2P35201 549 aa8.7□□□□□ -1.02
PEP8YJL053W ATH1P48016 1211 aa8.7□□□□□ -1.02
PEP8YJL053W DPS1P04802 557 aaKnown RBP8.67□□□□□ -1.02
PEP8YJL053W YDR344CQ05510 147 aa8.67□□□□□ -1.02
PEP8YJL053W GUT1P32190 709 aa8.64□□□□□ -1.03
PEP8YJL053W ARH1P48360 493 aa8.62□□□□□ -1.03
PEP8YJL053W PEX29Q03370 554 aa8.62□□□□□ -1.03
PEP8YJL053W PTC3P34221 468 aaKnown RBP8.59□□□□□ -1.03
PEP8YJL053W MID1P41821 548 aa8.59□□□□□ -1.03
PEP8YJL053W MAK11P20484 414 aaKnown RBP8.57□□□□□ -1.04
PEP8YJL053W SPT23P35210 1082 aa8.56□□□□□ -1.04
PEP8YJL053W EDS1P38073 919 aa8.52□□□□□ -1.05
PEP8YJL053W HAP5Q02516 242 aa8.49□□□□□ -1.05
PEP8YJL053W RAM2P29703 316 aa8.47□□□□□ -1.05
PEP8YJL053W AI4P03878 556 aa8.46□□□□□ -1.06
PEP8YJL053W COQ8P27697 501 aa8.46□□□□□ -1.06
PEP8YJL053W MPH3P0CE00 602 aa8.45□□□□□ -1.06
PEP8YJL053W PTC2P39966 464 aaKnown RBP8.45□□□□□ -1.06
PEP8YJL053W NST1P53935 1240 aa8.44□□□□□ -1.06
PEP8YJL053W SOL3P38858 249 aa8.43□□□□□ -1.06
PEP8YJL053W BNI4P53858 892 aa8.42□□□□□ -1.06
PEP8YJL053W YML082WQ04533 649 aaKnown RBP8.39□□□□□ -1.07
PEP8YJL053W MPC54Q08550 464 aa8.36□□□□□ -1.07
PEP8YJL053W ILV3P39522 585 aaKnown RBP8.33□□□□□ -1.08
PEP8YJL053W SRC1Q03707 834 aa8.33□□□□□ -1.08
PEP8YJL053W NMA111P53920 997 aa8.32□□□□□ -1.08
PEP8YJL053W YGR273CP53329 174 aa8.31□□□□□ -1.08
PEP8YJL053W NOP53Q12080 455 aaKnown RBP8.27□□□□□ -1.09
PEP8YJL053W DPL1Q05567 589 aa8.26□□□□□ -1.09
PEP8YJL053W RGA2Q06407 1009 aa8.26□□□□□ -1.09
PEP8YJL053W SLI15P38283 698 aa8.25□□□□□ -1.09
PEP8YJL053W RGA1P39083 1007 aa8.22□□□□□ -1.09
PEP8YJL053W RAS1P01119 309 aa8.21□□□□□ -1.1
PEP8YJL053W GYP1Q08484 637 aa8.2□□□□□ -1.1
PEP8YJL053W ISU2Q12056 156 aa8.17□□□□□ -1.1
PEP8YJL053W YPR015CQ12531 247 aa8.14□□□□□ -1.11
PEP8YJL053W TRK1P12685 1235 aa8.11□□□□□ -1.11
PEP8YJL053W KEX1P09620 729 aa8.1□□□□□ -1.11
PEP8YJL053W AMS1P22855 1083 aa8.1□□□□□ -1.11
PEP8YJL053W RAM1P22007 431 aa8.09□□□□□ -1.11
PEP8YJL053W SAS4Q04003 481 aa8.06□□□□□ -1.12
PEP8YJL053W CDC73Q06697 393 aa8.06□□□□□ -1.12
PEP8YJL053W YEL077CQ3E7X8 1277 aa8.03□□□□□ -1.12
PEP8YJL053W RPP1BP10622 106 aaKnown RBP8.02□□□□□ -1.13
PEP8YJL053W PDR1P12383 1068 aa8.01□□□□□ -1.13
PEP8YJL053W MRF1P30775 413 aaPredicted RBP7.99□□□□□ -1.13
PEP8YJL053W VHR2P40041 505 aa7.97□□□□□ -1.13
PEP8YJL053W YLR326WQ06170 240 aaKnown RBP7.96□□□□□ -1.14
PEP8YJL053W RAD54P32863 898 aa7.94□□□□□ -1.14
PEP8YJL053W UBP14P38237 781 aaKnown RBP7.94□□□□□ -1.14
PEP8YJL053W SDH2P21801 266 aa7.92□□□□□ -1.14
PEP8YJL053W SET1P38827 1080 aaKnown RBP7.92□□□□□ -1.14
PEP8YJL053W PCS60P38137 543 aaKnown RBP RIP-Chip data7.91□□□□□ -1.14 RIP-Chip
PEP8YJL053W PEX21P50091 288 aa7.9□□□□□ -1.14
PEP8YJL053W PRT1P06103 763 aaKnown RBP7.87□□□□□ -1.15
PEP8YJL053W ERG12P07277 443 aa7.87□□□□□ -1.15
PEP8YJL053W KIC1P38692 1080 aa7.86□□□□□ -1.15
PEP8YJL053W GBP2P25555 427 aaKnown RBP RIP-Chip data7.85□□□□□ -1.15not detected
PEP8YJL053W GCR2Q01722 534 aa7.85□□□□□ -1.15
PEP8YJL053W YPL062WQ02781 134 aa7.85□□□□□ -1.15
PEP8YJL053W BUD20Q08004 166 aaPredicted RBP7.84□□□□□ -1.15
PEP8YJL053W YRR1Q12172 810 aa7.84□□□□□ -1.15
PEP8YJL053W GAR1P28007 205 aaKnown RBP7.81□□□□□ -1.16
PEP8YJL053W BRE2P43132 505 aa7.81□□□□□ -1.16
PEP8YJL053W NPL4P33755 580 aa7.79□□□□□ -1.16
PEP8YJL053W IFH1P39520 1085 aa7.78□□□□□ -1.16
PEP8YJL053W STR2P47164 639 aa7.76□□□□□ -1.17
PEP8YJL053W TUM1Q08686 304 aaKnown RBP7.76□□□□□ -1.17
PEP8YJL053W NUD1P32336 851 aa7.75□□□□□ -1.17
PEP8YJL053W AIR1P40507 360 aaKnown RBP7.75□□□□□ -1.17
PEP8YJL053W ISM1P48526 1002 aa7.75□□□□□ -1.17
PEP8YJL053W TFB4Q12004 338 aa7.75□□□□□ -1.17
PEP8YJL053W SPT16P32558 1035 aaKnown RBP7.74□□□□□ -1.17
PEP8YJL053W CSC1Q06538 782 aa7.74□□□□□ -1.17
PEP8YJL053W GCD11P32481 527 aaKnown RBP7.72□□□□□ -1.17
PEP8YJL053W CST6P40535 587 aa7.71□□□□□ -1.18
PEP8YJL053W YDR090CQ03193 310 aa7.71□□□□□ -1.18
PEP8YJL053W CLA4P48562 842 aa7.69□□□□□ -1.18
PEP8YJL053W FRK1Q03002 865 aaPredicted RBP7.68□□□□□ -1.18
PEP8YJL053W GAP1P19145 602 aaPredicted RBP7.66□□□□□ -1.18
PEP8YJL053W PAT1P25644 796 aaKnown RBP7.65□□□□□ -1.18
PEP8YJL053W LAM6Q08001 693 aa7.65□□□□□ -1.18
PEP8YJL053W CDC4P07834 779 aa7.62□□□□□ -1.19
PEP8YJL053W REF2P42073 533 aaPredicted RBP7.62□□□□□ -1.19
PEP8YJL053W SEC2P17065 759 aa7.61□□□□□ -1.19
PEP8YJL053W RRN7P40992 514 aa7.61□□□□□ -1.19
PEP8YJL053W BDP1P46678 594 aa7.6□□□□□ -1.19
PEP8YJL053W TY1A-DR4O74302 440 aa7.59□□□□□ -1.19
PEP8YJL053W TY1A-HP0C2I4 478 aaKnown RBP7.59□□□□□ -1.19
PEP8YJL053W TY1A-AP0CX57 440 aa7.59□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 30.4 ms