RNA–Protein interactions for RNA: YIL038C

NOT3, Transcript of Subunit of CCR4-NOT global transcriptional regulator, yeastyeast

Gene NOT3, Length 2,511 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NOT3YIL038C TY1B-GR2Q12269 1755 aa7.87□□□□□ -1.15
NOT3YIL038C TY1B-OLQ12273 1755 aa7.87□□□□□ -1.15
NOT3YIL038C TY1B-PLQ12414 1755 aaKnown RBP7.87□□□□□ -1.15
NOT3YIL038C REB1P21538 810 aa7.86□□□□□ -1.15
NOT3YIL038C YAH1Q12184 172 aaKnown RBP7.86□□□□□ -1.15
NOT3YIL038C PAN1P32521 1480 aa7.85□□□□□ -1.15
NOT3YIL038C SPP41P38904 1435 aa7.84□□□□□ -1.15
NOT3YIL038C STH1P32597 1359 aa7.84□□□□□ -1.15
NOT3YIL038C MGA2P40578 1113 aa7.83□□□□□ -1.16
NOT3YIL038C SNT2P53127 1403 aa7.83□□□□□ -1.16
NOT3YIL038C SNQ2P32568 1501 aaKnown RBP7.82□□□□□ -1.16
NOT3YIL038C PSD2P53037 1138 aaKnown RBP7.81□□□□□ -1.16
NOT3YIL038C TSC11P40061 1430 aa7.8□□□□□ -1.16
NOT3YIL038C RPN1P38764 993 aaKnown RBP7.79□□□□□ -1.16
NOT3YIL038C NUP170P38181 1502 aa7.78□□□□□ -1.16
NOT3YIL038C VTH1P40438 1549 aa7.78□□□□□ -1.16
NOT3YIL038C VTH2P40890 1549 aa7.78□□□□□ -1.16
NOT3YIL038C MLP2P40457 1679 aa7.78□□□□□ -1.16
NOT3YIL038C MET5P47169 1442 aa7.77□□□□□ -1.17
NOT3YIL038C RAM2P29703 316 aa7.76□□□□□ -1.17
NOT3YIL038C YPR148CQ06523 435 aa7.76□□□□□ -1.17
NOT3YIL038C RPA190P10964 1664 aaKnown RBP7.73□□□□□ -1.17
NOT3YIL038C TY1B-JR2P47100 1755 aaKnown RBP7.72□□□□□ -1.17
NOT3YIL038C TY1B-ER2Q03619 1755 aa7.72□□□□□ -1.17
NOT3YIL038C TY1B-MR1Q04214 1755 aa7.72□□□□□ -1.17
NOT3YIL038C TY1B-MR2Q04670 1755 aaKnown RBP7.72□□□□□ -1.17
NOT3YIL038C TY1B-LR1Q12088 1755 aaKnown RBP7.72□□□□□ -1.17
NOT3YIL038C TY1B-NL1Q12112 1755 aa7.72□□□□□ -1.17
NOT3YIL038C TY1B-GR1Q12141 1755 aa7.72□□□□□ -1.17
NOT3YIL038C TY1B-BLQ12490 1755 aa7.72□□□□□ -1.17
NOT3YIL038C CAT8P39113 1433 aa7.72□□□□□ -1.17
NOT3YIL038C GEA2P39993 1459 aaKnown RBP7.71□□□□□ -1.17
NOT3YIL038C IRC20Q06554 1556 aa7.71□□□□□ -1.18
NOT3YIL038C TRM732Q03496 1420 aa7.71□□□□□ -1.18
NOT3YIL038C ULS1Q08562 1619 aa7.71□□□□□ -1.18
NOT3YIL038C RPO21P04050 1733 aaKnown RBP7.7□□□□□ -1.18
NOT3YIL038C RLF2Q12495 606 aa7.7□□□□□ -1.18
NOT3YIL038C PDR12Q02785 1511 aa7.7□□□□□ -1.18
NOT3YIL038C ORC1P54784 914 aaPredicted RBP7.7□□□□□ -1.18
NOT3YIL038C NTE1Q04958 1679 aa7.69□□□□□ -1.18
NOT3YIL038C RCR1P38212 213 aa7.69□□□□□ -1.18
NOT3YIL038C CKB1P43639 278 aa7.68□□□□□ -1.18
NOT3YIL038C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.68□□□□□ -1.18not detected
NOT3YIL038C ESC1Q03661 1658 aaKnown RBP7.68□□□□□ -1.18
NOT3YIL038C RSM7P47150 247 aa7.68□□□□□ -1.18
NOT3YIL038C PDR10P51533 1564 aa7.66□□□□□ -1.18
NOT3YIL038C PDR15Q04182 1529 aaKnown RBP7.66□□□□□ -1.18
NOT3YIL038C IKI3Q06706 1349 aaKnown RBP7.65□□□□□ -1.18
NOT3YIL038C DNF1P32660 1571 aa7.64□□□□□ -1.19
NOT3YIL038C TSR3Q12094 313 aaKnown RBP7.63□□□□□ -1.19
NOT3YIL038C GEA1P47102 1408 aaPredicted RBP7.63□□□□□ -1.19
NOT3YIL038C TFC8Q12308 588 aa7.62□□□□□ -1.19
NOT3YIL038C DCD1P06773 312 aa7.61□□□□□ -1.19
NOT3YIL038C DSF2P38213 736 aa7.61□□□□□ -1.19
NOT3YIL038C NUP159P40477 1460 aa7.61□□□□□ -1.19
NOT3YIL038C BUD3P25558 1636 aa7.6□□□□□ -1.19
NOT3YIL038C SET1P38827 1080 aaKnown RBP7.59□□□□□ -1.19
NOT3YIL038C AAD16Q02895 342 aa7.59□□□□□ -1.19
NOT3YIL038C IQG1Q12280 1495 aa7.59□□□□□ -1.2
NOT3YIL038C GDB1Q06625 1536 aa7.57□□□□□ -1.2
NOT3YIL038C HOP09932 586 aa7.56□□□□□ -1.2
NOT3YIL038C YIL055CP40523 627 aaKnown RBP7.55□□□□□ -1.2
NOT3YIL038C TY3B-GQ99315 1547 aa7.55□□□□□ -1.2
NOT3YIL038C LTE1P07866 1435 aa7.55□□□□□ -1.2
NOT3YIL038C NOP8Q08287 484 aaPredicted RBP7.55□□□□□ -1.2
NOT3YIL038C VPS15P22219 1454 aa7.54□□□□□ -1.2
NOT3YIL038C YBT1P32386 1661 aa7.54□□□□□ -1.2
NOT3YIL038C AI2P03876 854 aa7.53□□□□□ -1.2
NOT3YIL038C MMS1Q06211 1407 aa7.53□□□□□ -1.2
NOT3YIL038C TRM3Q07527 1436 aa7.52□□□□□ -1.21
NOT3YIL038C VPS70P47161 811 aa7.52□□□□□ -1.21
NOT3YIL038C MET10P39692 1035 aa7.51□□□□□ -1.21
NOT3YIL038C NUP42P49686 430 aaKnown RBP7.5□□□□□ -1.21
NOT3YIL038C YRF1-1P0CX20 1796 aa7.5□□□□□ -1.21
NOT3YIL038C YRF1-5P0CX21 1796 aa7.5□□□□□ -1.21
NOT3YIL038C YRF1-8P0CX22 1796 aa7.5□□□□□ -1.21
NOT3YIL038C KIN1P13185 1064 aa7.5□□□□□ -1.21
NOT3YIL038C GUA1P38625 525 aaKnown RBP7.49□□□□□ -1.21
NOT3YIL038C SRB8P25648 1427 aa7.49□□□□□ -1.21
NOT3YIL038C CDC27P38042 758 aa7.48□□□□□ -1.21
NOT3YIL038C BCH2P36122 765 aa7.48□□□□□ -1.21
NOT3YIL038C PDR5P33302 1511 aaKnown RBP7.47□□□□□ -1.21
NOT3YIL038C IOC4Q04213 475 aa7.47□□□□□ -1.21
NOT3YIL038C SPO14P36126 1683 aa7.46□□□□□ -1.22
NOT3YIL038C HAP1P0CE41 1502 aa7.46□□□□□ -1.22
NOT3YIL038C DIT2P21595 489 aa7.45□□□□□ -1.22
NOT3YIL038C ARO1P08566 1588 aaKnown RBP7.45□□□□□ -1.22
NOT3YIL038C RTT106P40161 455 aa7.45□□□□□ -1.22
NOT3YIL038C SPB4P25808 606 aaPredicted RBP7.44□□□□□ -1.22
NOT3YIL038C MAM3Q12296 706 aa7.43□□□□□ -1.22
NOT3YIL038C GCN2P15442 1659 aa7.43□□□□□ -1.22
NOT3YIL038C YNR021WP53723 404 aaKnown RBP7.42□□□□□ -1.22
NOT3YIL038C YML020WQ03722 664 aa7.42□□□□□ -1.22
NOT3YIL038C GLC3P32775 704 aa7.42□□□□□ -1.22
NOT3YIL038C PBS2P08018 668 aa7.41□□□□□ -1.22
NOT3YIL038C NUP157P40064 1391 aaKnown RBP7.4□□□□□ -1.23
NOT3YIL038C DOP1Q03921 1698 aa7.39□□□□□ -1.23
NOT3YIL038C YSP2Q06681 1438 aa7.38□□□□□ -1.23
NOT3YIL038C AIM7Q12156 149 aa7.38□□□□□ -1.23
NOT3YIL038C MAK11P20484 414 aaKnown RBP7.37□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms