RNA–Protein interactions for RNA: YHR031C

RRM3, Transcript of DNA helicase involved in rDNA replication and Ty1 transposition, yeastyeast

Gene RRM3, Length 2,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRM3YHR031C HTA1P04911 132 aaKnown RBP4.53□□□□□ -1.68
RRM3YHR031C HTA2P04912 132 aa4.53□□□□□ -1.68
RRM3YHR031C PTC4P38089 393 aa4.53□□□□□ -1.68
RRM3YHR031C YEL023CP39992 682 aa4.51□□□□□ -1.69
RRM3YHR031C GYP5Q12344 894 aa4.51□□□□□ -1.69
RRM3YHR031C RTG3P38165 486 aa4.51□□□□□ -1.69
RRM3YHR031C DMA1P38823 416 aa4.5□□□□□ -1.69
RRM3YHR031C DCW1P36091 449 aa4.47□□□□□ -1.69
RRM3YHR031C YDR344CQ05510 147 aa4.47□□□□□ -1.69
RRM3YHR031C ELP4Q02884 456 aaKnown RBP4.46□□□□□ -1.7
RRM3YHR031C SRC1Q03707 834 aa4.46□□□□□ -1.7
RRM3YHR031C URN1Q06525 465 aaKnown RBP4.44□□□□□ -1.7
RRM3YHR031C PML39Q03760 334 aa4.43□□□□□ -1.7
RRM3YHR031C ARP8Q12386 881 aaKnown RBP RIP-Chip data4.43□□□□□ -1.7not detected
RRM3YHR031C LEO1P38439 464 aa4.41□□□□□ -1.7
RRM3YHR031C ARH1P48360 493 aa4.41□□□□□ -1.7
RRM3YHR031C CST9Q06032 482 aa4.41□□□□□ -1.7
RRM3YHR031C RCR1P38212 213 aa4.38□□□□□ -1.71
RRM3YHR031C MGA2P40578 1113 aa4.37□□□□□ -1.71
RRM3YHR031C SPT23P35210 1082 aa4.36□□□□□ -1.71
RRM3YHR031C SSP1P38871 571 aa4.36□□□□□ -1.71
RRM3YHR031C NOP2P40991 618 aaKnown RBP4.35□□□□□ -1.71
RRM3YHR031C EBP2P36049 427 aaKnown RBP4.34□□□□□ -1.71
RRM3YHR031C CAB3P36076 571 aa4.34□□□□□ -1.72
RRM3YHR031C GRE2Q12068 342 aaKnown RBP4.34□□□□□ -1.72
RRM3YHR031C MID1P41821 548 aa4.31□□□□□ -1.72
RRM3YHR031C SIS2P36024 562 aa4.31□□□□□ -1.72
RRM3YHR031C BNI4P53858 892 aa4.3□□□□□ -1.72
RRM3YHR031C YML082WQ04533 649 aaKnown RBP4.3□□□□□ -1.72
RRM3YHR031C HAP5Q02516 242 aa4.29□□□□□ -1.72
RRM3YHR031C PEX29Q03370 554 aa4.29□□□□□ -1.72
RRM3YHR031C NST1P53935 1240 aa4.28□□□□□ -1.72
RRM3YHR031C GUT1P32190 709 aa4.27□□□□□ -1.73
RRM3YHR031C ATH1P48016 1211 aa4.27□□□□□ -1.73
RRM3YHR031C PTC2P39966 464 aaKnown RBP4.26□□□□□ -1.73
RRM3YHR031C RAS1P01119 309 aa4.24□□□□□ -1.73
RRM3YHR031C AI4P03878 556 aa4.23□□□□□ -1.73
RRM3YHR031C MPH3P0CE00 602 aa4.22□□□□□ -1.73
RRM3YHR031C TRK1P12685 1235 aa4.22□□□□□ -1.73
RRM3YHR031C PTC3P34221 468 aaKnown RBP4.21□□□□□ -1.73
RRM3YHR031C YPL062WQ02781 134 aa4.21□□□□□ -1.74
RRM3YHR031C MIF2P35201 549 aa4.2□□□□□ -1.74
RRM3YHR031C SOL3P38858 249 aa4.2□□□□□ -1.74
RRM3YHR031C EDS1P38073 919 aa4.19□□□□□ -1.74
RRM3YHR031C MPC54Q08550 464 aa4.19□□□□□ -1.74
RRM3YHR031C MAK11P20484 414 aaKnown RBP4.17□□□□□ -1.74
RRM3YHR031C AMS1P22855 1083 aa4.17□□□□□ -1.74
RRM3YHR031C ILV3P39522 585 aaKnown RBP4.17□□□□□ -1.74
RRM3YHR031C LEU3P08638 886 aa4.16□□□□□ -1.74
RRM3YHR031C YFR016CP43597 1233 aaKnown RBP4.16□□□□□ -1.74
RRM3YHR031C NMA111P53920 997 aa4.15□□□□□ -1.75
RRM3YHR031C YPR015CQ12531 247 aa4.14□□□□□ -1.75
RRM3YHR031C SAS10Q12136 610 aaPredicted RBP4.13□□□□□ -1.75
RRM3YHR031C RPS0BP46654 252 aaKnown RBP4.12□□□□□ -1.75
RRM3YHR031C RAM1P22007 431 aa4.11□□□□□ -1.75
RRM3YHR031C YRB30P53107 440 aaPredicted RBP4.11□□□□□ -1.75
RRM3YHR031C DPL1Q05567 589 aa4.11□□□□□ -1.75
RRM3YHR031C GYP1Q08484 637 aa4.1□□□□□ -1.75
RRM3YHR031C COQ8P27697 501 aa4.09□□□□□ -1.75
RRM3YHR031C YGR273CP53329 174 aa4.09□□□□□ -1.75
RRM3YHR031C DMA2P53924 522 aa4.09□□□□□ -1.76
RRM3YHR031C SLI15P38283 698 aa4.08□□□□□ -1.76
RRM3YHR031C IFH1P39520 1085 aa4.08□□□□□ -1.76
RRM3YHR031C RAM2P29703 316 aa4.07□□□□□ -1.76
RRM3YHR031C SAS4Q04003 481 aa4.07□□□□□ -1.76
RRM3YHR031C SDH2P21801 266 aa4.07□□□□□ -1.76
RRM3YHR031C ISU2Q12056 156 aa4.06□□□□□ -1.76
RRM3YHR031C YEL077CQ3E7X8 1277 aa4.06□□□□□ -1.76
RRM3YHR031C YPR148CQ06523 435 aa4.05□□□□□ -1.76
RRM3YHR031C KRI1P42846 591 aaKnown RBP4.03□□□□□ -1.76
RRM3YHR031C NOP53Q12080 455 aaKnown RBP4.03□□□□□ -1.76
RRM3YHR031C BRE2P43132 505 aa4.02□□□□□ -1.77
RRM3YHR031C GBP2P25555 427 aaKnown RBP RIP-Chip data4□□□□□ -1.77not detected
RRM3YHR031C GAR1P28007 205 aaKnown RBP4□□□□□ -1.77
RRM3YHR031C IOC4Q04213 475 aa4□□□□□ -1.77
RRM3YHR031C MRF1P30775 413 aaPredicted RBP4□□□□□ -1.77
RRM3YHR031C GCR2Q01722 534 aa4□□□□□ -1.77
RRM3YHR031C NAP1P25293 417 aaKnown RBP3.99□□□□□ -1.77
RRM3YHR031C ORC1P54784 914 aaPredicted RBP3.98□□□□□ -1.77
RRM3YHR031C PDR1P12383 1068 aa3.97□□□□□ -1.77
RRM3YHR031C MNN4P36044 1178 aa3.97□□□□□ -1.77
RRM3YHR031C SET1P38827 1080 aaKnown RBP3.97□□□□□ -1.77
RRM3YHR031C RLF2Q12495 606 aa3.97□□□□□ -1.77
RRM3YHR031C CWC22P53333 577 aaKnown RBP3.96□□□□□ -1.78
RRM3YHR031C TCB2P48231 1178 aa3.96□□□□□ -1.78
RRM3YHR031C CDC73Q06697 393 aa3.96□□□□□ -1.78
RRM3YHR031C KEX1P09620 729 aa3.95□□□□□ -1.78
RRM3YHR031C RPN1P38764 993 aaKnown RBP3.95□□□□□ -1.78
RRM3YHR031C DEF1P35732 738 aaKnown RBP3.94□□□□□ -1.78
RRM3YHR031C AIR1P40507 360 aaKnown RBP3.94□□□□□ -1.78
RRM3YHR031C VPS70P47161 811 aa3.92□□□□□ -1.78
RRM3YHR031C ERG12P07277 443 aa3.91□□□□□ -1.78
RRM3YHR031C CKB1P43639 278 aa3.91□□□□□ -1.78
RRM3YHR031C AIM44Q99299 758 aa3.91□□□□□ -1.78
RRM3YHR031C PRT1P06103 763 aaKnown RBP3.9□□□□□ -1.78
RRM3YHR031C MET22P32179 357 aa3.9□□□□□ -1.79
RRM3YHR031C BUD20Q08004 166 aaPredicted RBP3.9□□□□□ -1.79
RRM3YHR031C ENV9Q08651 330 aa3.9□□□□□ -1.79
RRM3YHR031C SPB4P25808 606 aaPredicted RBP3.89□□□□□ -1.79
RRM3YHR031C NUG1P40010 520 aaKnown RBP3.89□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms