RNA–Protein interactions for RNA: YGR253C

PUP2, Transcript of Alpha 5 subunit of the 20S proteasome, yeastyeast

Gene PUP2, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP2YGR253C TY1B-LR1Q12088 1755 aaKnown RBP12.24□□□□□ -0.45
PUP2YGR253C TY1B-NL1Q12112 1755 aa12.24□□□□□ -0.45
PUP2YGR253C TY1B-GR1Q12141 1755 aa12.24□□□□□ -0.45
PUP2YGR253C TY1B-BLQ12490 1755 aa12.24□□□□□ -0.45
PUP2YGR253C NTE1Q04958 1679 aa12.22□□□□□ -0.45
PUP2YGR253C TSC11P40061 1430 aa12.2□□□□□ -0.46
PUP2YGR253C YFR006WP43590 535 aa12.19□□□□□ -0.46
PUP2YGR253C VTH1P40438 1549 aa12.19□□□□□ -0.46
PUP2YGR253C VTH2P40890 1549 aa12.19□□□□□ -0.46
PUP2YGR253C RPO21P04050 1733 aaKnown RBP12.16□□□□□ -0.46
PUP2YGR253C IRC20Q06554 1556 aa12.1□□□□□ -0.47
PUP2YGR253C MYO4P32492 1471 aa12.09□□□□□ -0.47
PUP2YGR253C SNT2P53127 1403 aa12.04□□□□□ -0.48
PUP2YGR253C DNF2Q12675 1612 aa12.04□□□□□ -0.48
PUP2YGR253C NUP170P38181 1502 aa12.03□□□□□ -0.48
PUP2YGR253C SNQ2P32568 1501 aaKnown RBP12.01□□□□□ -0.49
PUP2YGR253C MET10P39692 1035 aa11.98□□□□□ -0.49
PUP2YGR253C YTA7P40340 1379 aa11.95□□□□□ -0.5
PUP2YGR253C SPO14P36126 1683 aa11.94□□□□□ -0.5
PUP2YGR253C ULS1Q08562 1619 aa11.94□□□□□ -0.5
PUP2YGR253C STH1P32597 1359 aa11.93□□□□□ -0.5
PUP2YGR253C RTT106P40161 455 aa11.91□□□□□ -0.5
PUP2YGR253C DOP1Q03921 1698 aa11.87□□□□□ -0.51
PUP2YGR253C PDR12Q02785 1511 aa11.86□□□□□ -0.51
PUP2YGR253C IQG1Q12280 1495 aa11.81□□□□□ -0.52
PUP2YGR253C TRM3Q07527 1436 aa11.79□□□□□ -0.52
PUP2YGR253C MLP2P40457 1679 aa11.79□□□□□ -0.52
PUP2YGR253C GDB1Q06625 1536 aa11.79□□□□□ -0.52
PUP2YGR253C PDR10P51533 1564 aa11.79□□□□□ -0.52
PUP2YGR253C NUP157P40064 1391 aaKnown RBP11.79□□□□□ -0.52
PUP2YGR253C YOR093CQ12275 1648 aa11.78□□□□□ -0.52
PUP2YGR253C BUD3P25558 1636 aa11.71□□□□□ -0.54
PUP2YGR253C PDR15Q04182 1529 aaKnown RBP11.67□□□□□ -0.54
PUP2YGR253C SAS10Q12136 610 aaPredicted RBP11.64□□□□□ -0.55
PUP2YGR253C ARO1P08566 1588 aaKnown RBP11.62□□□□□ -0.55
PUP2YGR253C CHC1P22137 1653 aaKnown RBP11.61□□□□□ -0.55
PUP2YGR253C FAP1P53971 965 aa11.57□□□□□ -0.56
PUP2YGR253C IFH1P39520 1085 aa11.56□□□□□ -0.56
PUP2YGR253C TAF7Q05021 590 aa11.55□□□□□ -0.56
PUP2YGR253C DNF3Q12674 1656 aa11.54□□□□□ -0.56
PUP2YGR253C SEC7P11075 2009 aaKnown RBP11.5□□□□□ -0.57
PUP2YGR253C YAP3P38749 330 aa11.48□□□□□ -0.57
PUP2YGR253C CAT8P39113 1433 aa11.46□□□□□ -0.57
PUP2YGR253C CKB1P43639 278 aa11.43□□□□□ -0.58
PUP2YGR253C GEA1P47102 1408 aaPredicted RBP11.42□□□□□ -0.58
PUP2YGR253C BNR1P40450 1375 aa11.41□□□□□ -0.58
PUP2YGR253C YSP2Q06681 1438 aa11.41□□□□□ -0.58
PUP2YGR253C YBT1P32386 1661 aa11.4□□□□□ -0.58
PUP2YGR253C MAK10Q02197 733 aa11.4□□□□□ -0.58
PUP2YGR253C TY3B-GQ99315 1547 aa11.4□□□□□ -0.59
PUP2YGR253C URN1Q06525 465 aaKnown RBP11.33□□□□□ -0.6
PUP2YGR253C USO1P25386 1790 aa11.29□□□□□ -0.6
PUP2YGR253C IPL1P38991 367 aa11.17□□□□□ -0.62
PUP2YGR253C SRB8P25648 1427 aa11.17□□□□□ -0.62
PUP2YGR253C THI12P42883 340 aa11.15□□□□□ -0.62
PUP2YGR253C THI5P43534 340 aa11.15□□□□□ -0.62
PUP2YGR253C THI11P47183 340 aa11.15□□□□□ -0.62
PUP2YGR253C THI13Q07748 340 aa11.15□□□□□ -0.62
PUP2YGR253C YMR196WQ04336 1088 aa11.14□□□□□ -0.63
PUP2YGR253C IML1P47170 1584 aa11.14□□□□□ -0.63
PUP2YGR253C TYS1P36421 394 aaKnown RBP11.11□□□□□ -0.63
PUP2YGR253C BUD21Q08492 214 aaPredicted RBP11.11□□□□□ -0.63
PUP2YGR253C TY1B-NL2Q99337 1749 aaKnown RBP11.1□□□□□ -0.63
PUP2YGR253C NUP188P52593 1655 aaKnown RBP11.1□□□□□ -0.63
PUP2YGR253C HAP1P0CE41 1502 aa11.09□□□□□ -0.63
PUP2YGR253C VMR1P38735 1592 aa11.06□□□□□ -0.64
PUP2YGR253C PDR5P33302 1511 aaKnown RBP10.97□□□□□ -0.65
PUP2YGR253C YAH1Q12184 172 aaKnown RBP10.92□□□□□ -0.66
PUP2YGR253C PRY3P47033 881 aa10.9□□□□□ -0.66
PUP2YGR253C GLN1P32288 370 aaKnown RBP10.88□□□□□ -0.67
PUP2YGR253C APP1P53933 587 aa10.84□□□□□ -0.67
PUP2YGR253C KRE5P22023 1365 aa10.82□□□□□ -0.68
PUP2YGR253C RIA1P53893 1110 aa10.82□□□□□ -0.68
PUP2YGR253C YIL055CP40523 627 aaKnown RBP10.81□□□□□ -0.68
PUP2YGR253C MRX12P47084 519 aa10.81□□□□□ -0.68
PUP2YGR253C PTP3P40048 928 aa10.8□□□□□ -0.68
PUP2YGR253C PDR11P40550 1411 aa10.8□□□□□ -0.68
PUP2YGR253C CFT1Q06632 1357 aaKnown RBP10.78□□□□□ -0.68
PUP2YGR253C YNR029CP53729 429 aaKnown RBP10.76□□□□□ -0.69
PUP2YGR253C IKI3Q06706 1349 aaKnown RBP10.76□□□□□ -0.69
PUP2YGR253C SSM4P40318 1319 aa10.71□□□□□ -0.69
PUP2YGR253C BCK1Q01389 1478 aa10.71□□□□□ -0.69
PUP2YGR253C GCN2P15442 1659 aa10.7□□□□□ -0.7
PUP2YGR253C REB1P21538 810 aa10.69□□□□□ -0.7
PUP2YGR253C ENT1Q12518 454 aa10.67□□□□□ -0.7
PUP2YGR253C PRI1P10363 409 aa10.66□□□□□ -0.7
PUP2YGR253C YMR074CQ04773 145 aa10.66□□□□□ -0.7
PUP2YGR253C CAB1Q04430 367 aa10.63□□□□□ -0.71
PUP2YGR253C ENV9Q08651 330 aa10.62□□□□□ -0.71
PUP2YGR253C NUP192P47054 1683 aa10.62□□□□□ -0.71
PUP2YGR253C PAF1P38351 445 aa10.6□□□□□ -0.71
PUP2YGR253C TY3B-IQ7LHG5 1498 aaKnown RBP10.6□□□□□ -0.71
PUP2YGR253C RAD9P14737 1309 aa10.59□□□□□ -0.71
PUP2YGR253C ALD4P46367 519 aaKnown RBP10.59□□□□□ -0.71
PUP2YGR253C RAV1P47104 1357 aa10.59□□□□□ -0.71
PUP2YGR253C IMH1Q06704 911 aaKnown RBP10.58□□□□□ -0.72
PUP2YGR253C AAD16Q02895 342 aa10.54□□□□□ -0.72
PUP2YGR253C BFR2Q06631 534 aaKnown RBP10.52□□□□□ -0.73
PUP2YGR253C BUD31P25337 157 aaPredicted RBP10.51□□□□□ -0.73
PUP2YGR253C RTC1Q08281 1341 aa10.51□□□□□ -0.73
Retrieved 100 of 5,963 RNA–protein pairs in 33.8 ms