RNA–Protein interactions for RNA: YGR244C

LSC2, Transcript of Beta subunit of succinyl-CoA ligase, yeastyeast

Gene LSC2, Length 1,284 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSC2YGR244C TY1B-GR1Q12141 1755 aa14.78□□□□□ -0.04
LSC2YGR244C TY1B-BLQ12490 1755 aa14.78□□□□□ -0.04
LSC2YGR244C PDR15Q04182 1529 aaKnown RBP14.76□□□□□ -0.05
LSC2YGR244C MET5P47169 1442 aa14.75□□□□□ -0.05
LSC2YGR244C NUP159P40477 1460 aa14.73□□□□□ -0.05
LSC2YGR244C NTE1Q04958 1679 aa14.72□□□□□ -0.05
LSC2YGR244C SNT2P53127 1403 aa14.72□□□□□ -0.05
LSC2YGR244C ULS1Q08562 1619 aa14.68□□□□□ -0.06
LSC2YGR244C RPO21P04050 1733 aaKnown RBP14.68□□□□□ -0.06
LSC2YGR244C GEA1P47102 1408 aaPredicted RBP14.66□□□□□ -0.06
LSC2YGR244C GEA2P39993 1459 aaKnown RBP14.63□□□□□ -0.07
LSC2YGR244C MET10P39692 1035 aa14.61□□□□□ -0.07
LSC2YGR244C VPS15P22219 1454 aa14.53□□□□□ -0.08
LSC2YGR244C YRF1-1P0CX20 1796 aa14.52□□□□□ -0.09
LSC2YGR244C YRF1-5P0CX21 1796 aa14.52□□□□□ -0.09
LSC2YGR244C YRF1-8P0CX22 1796 aa14.52□□□□□ -0.09
LSC2YGR244C IKI3Q06706 1349 aaKnown RBP14.5□□□□□ -0.09
LSC2YGR244C LTE1P07866 1435 aa14.47□□□□□ -0.09
LSC2YGR244C CAT8P39113 1433 aa14.47□□□□□ -0.09
LSC2YGR244C IRC20Q06554 1556 aa14.47□□□□□ -0.09
LSC2YGR244C NUP157P40064 1391 aaKnown RBP14.45□□□□□ -0.1
LSC2YGR244C PDR12Q02785 1511 aa14.42□□□□□ -0.1
LSC2YGR244C SPO14P36126 1683 aa14.42□□□□□ -0.1
LSC2YGR244C CKB1P43639 278 aa14.41□□□□□ -0.1
LSC2YGR244C TY3B-GQ99315 1547 aa14.41□□□□□ -0.1
LSC2YGR244C GDB1Q06625 1536 aa14.37□□□□□ -0.11
LSC2YGR244C YBT1P32386 1661 aa14.36□□□□□ -0.11
LSC2YGR244C PDR10P51533 1564 aa14.35□□□□□ -0.11
LSC2YGR244C DRS2P39524 1355 aa14.32□□□□□ -0.12
LSC2YGR244C IQG1Q12280 1495 aa14.3□□□□□ -0.12
LSC2YGR244C NUP170P38181 1502 aa14.3□□□□□ -0.12
LSC2YGR244C SSM4P40318 1319 aa14.28□□□□□ -0.12
LSC2YGR244C SRB8P25648 1427 aa14.26□□□□□ -0.13
LSC2YGR244C BUD3P25558 1636 aa14.26□□□□□ -0.13
LSC2YGR244C ARO1P08566 1588 aaKnown RBP14.26□□□□□ -0.13
LSC2YGR244C ITT1Q04638 464 aa14.22□□□□□ -0.13
LSC2YGR244C BUD21Q08492 214 aaPredicted RBP14.2□□□□□ -0.14
LSC2YGR244C MMS1Q06211 1407 aa14.14□□□□□ -0.15
LSC2YGR244C YSP2Q06681 1438 aa14.14□□□□□ -0.15
LSC2YGR244C BNR1P40450 1375 aa14.13□□□□□ -0.15
LSC2YGR244C TRM3Q07527 1436 aa14.13□□□□□ -0.15
LSC2YGR244C DOP1Q03921 1698 aa14.08□□□□□ -0.16
LSC2YGR244C BNI1P41832 1953 aa14.08□□□□□ -0.16
LSC2YGR244C SEC7P11075 2009 aaKnown RBP14.05□□□□□ -0.16
LSC2YGR244C CHC1P22137 1653 aaKnown RBP13.97□□□□□ -0.17
LSC2YGR244C PAF1P38351 445 aa13.92□□□□□ -0.18
LSC2YGR244C GCN2P15442 1659 aa13.91□□□□□ -0.18
LSC2YGR244C URN1Q06525 465 aaKnown RBP13.91□□□□□ -0.18
LSC2YGR244C NOP7P53261 605 aaKnown RBP13.89□□□□□ -0.19
LSC2YGR244C ABP1P15891 592 aaKnown RBP13.87□□□□□ -0.19
LSC2YGR244C DNF2Q12675 1612 aa13.82□□□□□ -0.2
LSC2YGR244C YAP3P38749 330 aa13.77□□□□□ -0.21
LSC2YGR244C YOR093CQ12275 1648 aa13.76□□□□□ -0.21
LSC2YGR244C BFR2Q06631 534 aaKnown RBP13.76□□□□□ -0.21
LSC2YGR244C NUP188P52593 1655 aaKnown RBP13.74□□□□□ -0.21
LSC2YGR244C IPL1P38991 367 aa13.73□□□□□ -0.21
LSC2YGR244C PDR5P33302 1511 aaKnown RBP13.71□□□□□ -0.21
LSC2YGR244C IML1P47170 1584 aa13.7□□□□□ -0.22
LSC2YGR244C VMR1P38735 1592 aa13.68□□□□□ -0.22
LSC2YGR244C TYS1P36421 394 aaKnown RBP13.66□□□□□ -0.22
LSC2YGR244C RAV1P47104 1357 aa13.64□□□□□ -0.23
LSC2YGR244C POL5P39985 1022 aaKnown RBP13.61□□□□□ -0.23
LSC2YGR244C PDR11P40550 1411 aa13.61□□□□□ -0.23
LSC2YGR244C RTC1Q08281 1341 aa13.6□□□□□ -0.23
LSC2YGR244C DNF3Q12674 1656 aa13.55□□□□□ -0.24
LSC2YGR244C ESL2P36168 1195 aa13.53□□□□□ -0.24
LSC2YGR244C TAF5P38129 798 aa13.53□□□□□ -0.24
LSC2YGR244C MAK10Q02197 733 aa13.52□□□□□ -0.25
LSC2YGR244C ORC1P54784 914 aaPredicted RBP13.51□□□□□ -0.25
LSC2YGR244C MIF2P35201 549 aa13.49□□□□□ -0.25
LSC2YGR244C MRX12P47084 519 aa13.47□□□□□ -0.25
LSC2YGR244C NAP1P25293 417 aaKnown RBP13.45□□□□□ -0.26
LSC2YGR244C HAP1P0CE41 1502 aa13.44□□□□□ -0.26
LSC2YGR244C SCT1P32784 759 aa13.42□□□□□ -0.26
LSC2YGR244C ALD4P46367 519 aaKnown RBP13.42□□□□□ -0.26
LSC2YGR244C KIP3P53086 805 aaKnown RBP13.41□□□□□ -0.26
LSC2YGR244C CAB1Q04430 367 aa13.4□□□□□ -0.26
LSC2YGR244C RAD9P14737 1309 aa13.39□□□□□ -0.27
LSC2YGR244C RIA1P53893 1110 aa13.36□□□□□ -0.27
LSC2YGR244C TAF8Q03750 510 aa13.36□□□□□ -0.27
LSC2YGR244C NUP192P47054 1683 aa13.36□□□□□ -0.27
LSC2YGR244C BCK1Q01389 1478 aa13.35□□□□□ -0.27
LSC2YGR244C KRE5P22023 1365 aa13.34□□□□□ -0.27
LSC2YGR244C TY3B-IQ7LHG5 1498 aaKnown RBP13.32□□□□□ -0.28
LSC2YGR244C SPE2P21182 396 aa13.32□□□□□ -0.28
LSC2YGR244C MHP1P43638 1398 aa13.26□□□□□ -0.29
LSC2YGR244C YMR196WQ04336 1088 aa13.26□□□□□ -0.29
LSC2YGR244C YLR419WQ06698 1435 aaKnown RBP13.26□□□□□ -0.29
LSC2YGR244C USO1P25386 1790 aa13.23□□□□□ -0.29
LSC2YGR244C TY1B-NL2Q99337 1749 aaKnown RBP13.23□□□□□ -0.29
LSC2YGR244C CHZ1P40019 153 aaPredicted RBP13.23□□□□□ -0.29
LSC2YGR244C CFT1Q06632 1357 aaKnown RBP13.22□□□□□ -0.29
LSC2YGR244C SEC3P33332 1336 aaKnown RBP13.22□□□□□ -0.29
LSC2YGR244C YNR029CP53729 429 aaKnown RBP13.2□□□□□ -0.3
LSC2YGR244C PDS5Q04264 1277 aa13.19□□□□□ -0.3
LSC2YGR244C RCM1P53972 490 aa13.16□□□□□ -0.3
LSC2YGR244C THI12P42883 340 aa13.14□□□□□ -0.31
LSC2YGR244C THI5P43534 340 aa13.14□□□□□ -0.31
LSC2YGR244C THI11P47183 340 aa13.14□□□□□ -0.31
LSC2YGR244C THI13Q07748 340 aa13.14□□□□□ -0.31
Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms