RNA–Protein interactions for RNA: YGL240W

DOC1, Transcript of Processivity factor, yeastyeast

Gene DOC1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DOC1YGL240W TY1B-MR1Q04214 1755 aa12.04□□□□□ -0.48
DOC1YGL240W TY1B-MR2Q04670 1755 aaKnown RBP12.04□□□□□ -0.48
DOC1YGL240W TY1B-LR1Q12088 1755 aaKnown RBP12.04□□□□□ -0.48
DOC1YGL240W TY1B-NL1Q12112 1755 aa12.04□□□□□ -0.48
DOC1YGL240W TY1B-GR1Q12141 1755 aa12.04□□□□□ -0.48
DOC1YGL240W TY1B-BLQ12490 1755 aa12.04□□□□□ -0.48
DOC1YGL240W VTH1P40438 1549 aa11.99□□□□□ -0.49
DOC1YGL240W VTH2P40890 1549 aa11.99□□□□□ -0.49
DOC1YGL240W IRC20Q06554 1556 aa11.99□□□□□ -0.49
DOC1YGL240W NTE1Q04958 1679 aa11.97□□□□□ -0.49
DOC1YGL240W RPO21P04050 1733 aaKnown RBP11.92□□□□□ -0.5
DOC1YGL240W DNF2Q12675 1612 aa11.9□□□□□ -0.5
DOC1YGL240W MET10P39692 1035 aa11.89□□□□□ -0.51
DOC1YGL240W SNT2P53127 1403 aa11.88□□□□□ -0.51
DOC1YGL240W MYO4P32492 1471 aa11.87□□□□□ -0.51
DOC1YGL240W NUP170P38181 1502 aa11.86□□□□□ -0.51
DOC1YGL240W SNQ2P32568 1501 aaKnown RBP11.82□□□□□ -0.52
DOC1YGL240W YTA7P40340 1379 aa11.81□□□□□ -0.52
DOC1YGL240W RTT106P40161 455 aa11.79□□□□□ -0.52
DOC1YGL240W SPO14P36126 1683 aa11.76□□□□□ -0.53
DOC1YGL240W ULS1Q08562 1619 aa11.75□□□□□ -0.53
DOC1YGL240W DOP1Q03921 1698 aa11.73□□□□□ -0.53
DOC1YGL240W STH1P32597 1359 aa11.72□□□□□ -0.53
DOC1YGL240W NUP157P40064 1391 aaKnown RBP11.67□□□□□ -0.54
DOC1YGL240W YOR093CQ12275 1648 aa11.64□□□□□ -0.55
DOC1YGL240W IQG1Q12280 1495 aa11.64□□□□□ -0.55
DOC1YGL240W PDR12Q02785 1511 aa11.64□□□□□ -0.55
DOC1YGL240W PDR10P51533 1564 aa11.62□□□□□ -0.55
DOC1YGL240W GDB1Q06625 1536 aa11.59□□□□□ -0.55
DOC1YGL240W SAS10Q12136 610 aaPredicted RBP11.56□□□□□ -0.56
DOC1YGL240W TRM3Q07527 1436 aa11.55□□□□□ -0.56
DOC1YGL240W MLP2P40457 1679 aa11.54□□□□□ -0.56
DOC1YGL240W PDR15Q04182 1529 aaKnown RBP11.51□□□□□ -0.57
DOC1YGL240W ARO1P08566 1588 aaKnown RBP11.5□□□□□ -0.57
DOC1YGL240W IFH1P39520 1085 aa11.49□□□□□ -0.57
DOC1YGL240W BUD3P25558 1636 aa11.43□□□□□ -0.58
DOC1YGL240W YAP3P38749 330 aa11.41□□□□□ -0.58
DOC1YGL240W TAF7Q05021 590 aa11.41□□□□□ -0.58
DOC1YGL240W DNF3Q12674 1656 aa11.37□□□□□ -0.59
DOC1YGL240W CKB1P43639 278 aa11.36□□□□□ -0.59
DOC1YGL240W MAK10Q02197 733 aa11.36□□□□□ -0.59
DOC1YGL240W CHC1P22137 1653 aaKnown RBP11.35□□□□□ -0.59
DOC1YGL240W GEA1P47102 1408 aaPredicted RBP11.31□□□□□ -0.6
DOC1YGL240W TY3B-GQ99315 1547 aa11.29□□□□□ -0.6
DOC1YGL240W YSP2Q06681 1438 aa11.28□□□□□ -0.6
DOC1YGL240W BNR1P40450 1375 aa11.28□□□□□ -0.6
DOC1YGL240W SEC7P11075 2009 aaKnown RBP11.26□□□□□ -0.61
DOC1YGL240W YBT1P32386 1661 aa11.25□□□□□ -0.61
DOC1YGL240W CAT8P39113 1433 aa11.24□□□□□ -0.61
DOC1YGL240W THI12P42883 340 aa11.16□□□□□ -0.62
DOC1YGL240W THI5P43534 340 aa11.16□□□□□ -0.62
DOC1YGL240W THI11P47183 340 aa11.16□□□□□ -0.62
DOC1YGL240W THI13Q07748 340 aa11.16□□□□□ -0.62
DOC1YGL240W URN1Q06525 465 aaKnown RBP11.15□□□□□ -0.62
DOC1YGL240W USO1P25386 1790 aa11.15□□□□□ -0.62
DOC1YGL240W TYS1P36421 394 aaKnown RBP11.11□□□□□ -0.63
DOC1YGL240W IPL1P38991 367 aa11.09□□□□□ -0.63
DOC1YGL240W YMR196WQ04336 1088 aa11.03□□□□□ -0.64
DOC1YGL240W SRB8P25648 1427 aa11.01□□□□□ -0.65
DOC1YGL240W BUD21Q08492 214 aaPredicted RBP10.97□□□□□ -0.65
DOC1YGL240W IML1P47170 1584 aa10.96□□□□□ -0.65
DOC1YGL240W GLN1P32288 370 aaKnown RBP10.94□□□□□ -0.66
DOC1YGL240W APP1P53933 587 aa10.92□□□□□ -0.66
DOC1YGL240W VMR1P38735 1592 aa10.91□□□□□ -0.66
DOC1YGL240W IKI3Q06706 1349 aaKnown RBP10.9□□□□□ -0.66
DOC1YGL240W NUP188P52593 1655 aaKnown RBP10.88□□□□□ -0.67
DOC1YGL240W PDR5P33302 1511 aaKnown RBP10.88□□□□□ -0.67
DOC1YGL240W YAH1Q12184 172 aaKnown RBP10.87□□□□□ -0.67
DOC1YGL240W SSM4P40318 1319 aa10.84□□□□□ -0.67
DOC1YGL240W HAP1P0CE41 1502 aa10.84□□□□□ -0.67
DOC1YGL240W TY1B-NL2Q99337 1749 aaKnown RBP10.84□□□□□ -0.67
DOC1YGL240W YIL055CP40523 627 aaKnown RBP10.81□□□□□ -0.68
DOC1YGL240W KRE5P22023 1365 aa10.77□□□□□ -0.69
DOC1YGL240W PTP3P40048 928 aa10.76□□□□□ -0.69
DOC1YGL240W RIA1P53893 1110 aa10.76□□□□□ -0.69
DOC1YGL240W PDR11P40550 1411 aa10.72□□□□□ -0.69
DOC1YGL240W MRX12P47084 519 aa10.7□□□□□ -0.7
DOC1YGL240W REB1P21538 810 aa10.68□□□□□ -0.7
DOC1YGL240W YNR029CP53729 429 aaKnown RBP10.68□□□□□ -0.7
DOC1YGL240W GCN2P15442 1659 aa10.67□□□□□ -0.7
DOC1YGL240W ENT1Q12518 454 aa10.66□□□□□ -0.7
DOC1YGL240W CFT1Q06632 1357 aaKnown RBP10.64□□□□□ -0.71
DOC1YGL240W PRI1P10363 409 aa10.63□□□□□ -0.71
DOC1YGL240W YMR074CQ04773 145 aa10.62□□□□□ -0.71
DOC1YGL240W ENV9Q08651 330 aa10.61□□□□□ -0.71
DOC1YGL240W CAB1Q04430 367 aa10.58□□□□□ -0.72
DOC1YGL240W BCK1Q01389 1478 aa10.57□□□□□ -0.72
DOC1YGL240W TY3B-IQ7LHG5 1498 aaKnown RBP10.53□□□□□ -0.72
DOC1YGL240W RAD9P14737 1309 aa10.53□□□□□ -0.72
DOC1YGL240W IMH1Q06704 911 aaKnown RBP10.52□□□□□ -0.73
DOC1YGL240W BUD31P25337 157 aaPredicted RBP10.5□□□□□ -0.73
DOC1YGL240W RAV1P47104 1357 aa10.49□□□□□ -0.73
DOC1YGL240W PAF1P38351 445 aa10.48□□□□□ -0.73
DOC1YGL240W ALD4P46367 519 aaKnown RBP10.47□□□□□ -0.73
DOC1YGL240W BFR2Q06631 534 aaKnown RBP10.46□□□□□ -0.73
DOC1YGL240W NUP192P47054 1683 aa10.44□□□□□ -0.74
DOC1YGL240W RTC1Q08281 1341 aa10.43□□□□□ -0.74
DOC1YGL240W PRP45P28004 379 aaPredicted RBP10.42□□□□□ -0.74
DOC1YGL240W NOP7P53261 605 aaKnown RBP10.39□□□□□ -0.75
DOC1YGL240W TAF5P38129 798 aa10.38□□□□□ -0.75
Retrieved 100 of 5,963 RNA–protein pairs in 43.7 ms