RNA–Protein interactions for RNA: YFR037C

RSC8, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene RSC8, Length 1,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RSC8YFR037C TY1B-GR1Q12141 1755 aa13.52□□□□□ -0.25
RSC8YFR037C TY1B-BLQ12490 1755 aa13.52□□□□□ -0.25
RSC8YFR037C RPA190P10964 1664 aaKnown RBP13.49□□□□□ -0.25
RSC8YFR037C GEA1P47102 1408 aaPredicted RBP13.42□□□□□ -0.26
RSC8YFR037C IKI3Q06706 1349 aaKnown RBP13.42□□□□□ -0.26
RSC8YFR037C SNT2P53127 1403 aa13.42□□□□□ -0.26
RSC8YFR037C NUP170P38181 1502 aa13.42□□□□□ -0.26
RSC8YFR037C NTE1Q04958 1679 aa13.4□□□□□ -0.26
RSC8YFR037C RPO21P04050 1733 aaKnown RBP13.36□□□□□ -0.27
RSC8YFR037C IFH1P39520 1085 aa13.34□□□□□ -0.27
RSC8YFR037C TY3B-GQ99315 1547 aa13.33□□□□□ -0.28
RSC8YFR037C LTE1P07866 1435 aa13.3□□□□□ -0.28
RSC8YFR037C NUP159P40477 1460 aa13.3□□□□□ -0.28
RSC8YFR037C GEA2P39993 1459 aaKnown RBP13.29□□□□□ -0.28
RSC8YFR037C YBT1P32386 1661 aa13.28□□□□□ -0.28
RSC8YFR037C IRC20Q06554 1556 aa13.28□□□□□ -0.28
RSC8YFR037C YRF1-1P0CX20 1796 aa13.23□□□□□ -0.29
RSC8YFR037C YRF1-5P0CX21 1796 aa13.23□□□□□ -0.29
RSC8YFR037C YRF1-8P0CX22 1796 aa13.23□□□□□ -0.29
RSC8YFR037C SSM4P40318 1319 aa13.22□□□□□ -0.29
RSC8YFR037C CAT8P39113 1433 aa13.18□□□□□ -0.3
RSC8YFR037C RTT106P40161 455 aa13.18□□□□□ -0.3
RSC8YFR037C VPS15P22219 1454 aa13.17□□□□□ -0.3
RSC8YFR037C ITT1Q04638 464 aa13.13□□□□□ -0.31
RSC8YFR037C PDR12Q02785 1511 aa13.12□□□□□ -0.31
RSC8YFR037C BNI1P41832 1953 aa13.11□□□□□ -0.31
RSC8YFR037C MET10P39692 1035 aa13.1□□□□□ -0.31
RSC8YFR037C SPO14P36126 1683 aa13.09□□□□□ -0.31
RSC8YFR037C GDB1Q06625 1536 aa13.08□□□□□ -0.32
RSC8YFR037C ARO1P08566 1588 aaKnown RBP13.07□□□□□ -0.32
RSC8YFR037C PDR10P51533 1564 aa13.07□□□□□ -0.32
RSC8YFR037C DRS2P39524 1355 aa13.04□□□□□ -0.32
RSC8YFR037C SRB8P25648 1427 aa13□□□□□ -0.33
RSC8YFR037C NUP157P40064 1391 aaKnown RBP12.98□□□□□ -0.33
RSC8YFR037C MMS1Q06211 1407 aa12.94□□□□□ -0.34
RSC8YFR037C BUD3P25558 1636 aa12.9□□□□□ -0.34
RSC8YFR037C GCN2P15442 1659 aa12.89□□□□□ -0.35
RSC8YFR037C CKB1P43639 278 aa12.88□□□□□ -0.35
RSC8YFR037C YSP2Q06681 1438 aa12.87□□□□□ -0.35
RSC8YFR037C IQG1Q12280 1495 aa12.86□□□□□ -0.35
RSC8YFR037C ABP1P15891 592 aaKnown RBP12.84□□□□□ -0.35
RSC8YFR037C SEC7P11075 2009 aaKnown RBP12.8□□□□□ -0.36
RSC8YFR037C MIF2P35201 549 aa12.8□□□□□ -0.36
RSC8YFR037C BUD21Q08492 214 aaPredicted RBP12.75□□□□□ -0.37
RSC8YFR037C TRM3Q07527 1436 aa12.73□□□□□ -0.37
RSC8YFR037C DOP1Q03921 1698 aa12.72□□□□□ -0.37
RSC8YFR037C DNF2Q12675 1612 aa12.72□□□□□ -0.37
RSC8YFR037C YOR093CQ12275 1648 aa12.71□□□□□ -0.37
RSC8YFR037C CHC1P22137 1653 aaKnown RBP12.7□□□□□ -0.38
RSC8YFR037C BNR1P40450 1375 aa12.7□□□□□ -0.38
RSC8YFR037C PDR5P33302 1511 aaKnown RBP12.68□□□□□ -0.38
RSC8YFR037C POL5P39985 1022 aaKnown RBP12.61□□□□□ -0.39
RSC8YFR037C NOP7P53261 605 aaKnown RBP12.58□□□□□ -0.4
RSC8YFR037C VMR1P38735 1592 aa12.57□□□□□ -0.4
RSC8YFR037C NUP188P52593 1655 aaKnown RBP12.55□□□□□ -0.4
RSC8YFR037C NSR1P27476 414 aaKnown RBP RIP-Chip data12.54□□□□□ -0.4not detected
RSC8YFR037C NOP2P40991 618 aaKnown RBP12.54□□□□□ -0.4
RSC8YFR037C PAF1P38351 445 aa12.52□□□□□ -0.4
RSC8YFR037C IML1P47170 1584 aa12.48□□□□□ -0.41
RSC8YFR037C BFR2Q06631 534 aaKnown RBP12.48□□□□□ -0.41
RSC8YFR037C RAV1P47104 1357 aa12.48□□□□□ -0.41
RSC8YFR037C PDR11P40550 1411 aa12.46□□□□□ -0.41
RSC8YFR037C YAP3P38749 330 aa12.43□□□□□ -0.42
RSC8YFR037C RTC1Q08281 1341 aa12.42□□□□□ -0.42
RSC8YFR037C YFR006WP43590 535 aa12.41□□□□□ -0.42
RSC8YFR037C TY3B-IQ7LHG5 1498 aaKnown RBP12.4□□□□□ -0.42
RSC8YFR037C SEC3P33332 1336 aaKnown RBP12.38□□□□□ -0.43
RSC8YFR037C URN1Q06525 465 aaKnown RBP12.37□□□□□ -0.43
RSC8YFR037C NUP192P47054 1683 aa12.36□□□□□ -0.43
RSC8YFR037C DNF3Q12674 1656 aa12.33□□□□□ -0.44
RSC8YFR037C MHP1P43638 1398 aa12.32□□□□□ -0.44
RSC8YFR037C SPT7P35177 1332 aa12.3□□□□□ -0.44
RSC8YFR037C ENP1P38333 483 aaKnown RBP12.28□□□□□ -0.44
RSC8YFR037C IPL1P38991 367 aa12.27□□□□□ -0.45
RSC8YFR037C TAF5P38129 798 aa12.26□□□□□ -0.45
RSC8YFR037C YLR419WQ06698 1435 aaKnown RBP12.25□□□□□ -0.45
RSC8YFR037C ESL2P36168 1195 aa12.25□□□□□ -0.45
RSC8YFR037C MAK10Q02197 733 aa12.25□□□□□ -0.45
RSC8YFR037C TYS1P36421 394 aaKnown RBP12.24□□□□□ -0.45
RSC8YFR037C ORC1P54784 914 aaPredicted RBP12.24□□□□□ -0.45
RSC8YFR037C HAP1P0CE41 1502 aa12.23□□□□□ -0.45
RSC8YFR037C KIP3P53086 805 aaKnown RBP12.18□□□□□ -0.46
RSC8YFR037C BCK1Q01389 1478 aa12.16□□□□□ -0.46
RSC8YFR037C PSD2P53037 1138 aaKnown RBP12.13□□□□□ -0.47
RSC8YFR037C SCT1P32784 759 aa12.11□□□□□ -0.47
RSC8YFR037C PDS5Q04264 1277 aa12.11□□□□□ -0.47
RSC8YFR037C RAD9P14737 1309 aa12.11□□□□□ -0.47
RSC8YFR037C MLP1Q02455 1875 aaKnown RBP12.1□□□□□ -0.47
RSC8YFR037C SPE2P21182 396 aa12.1□□□□□ -0.47
RSC8YFR037C ALD4P46367 519 aaKnown RBP12.1□□□□□ -0.47
RSC8YFR037C LEU3P08638 886 aa12.07□□□□□ -0.48
RSC8YFR037C TAF8Q03750 510 aa12.06□□□□□ -0.48
RSC8YFR037C USO1P25386 1790 aa12.03□□□□□ -0.48
RSC8YFR037C CAB1Q04430 367 aa12.02□□□□□ -0.49
RSC8YFR037C NAP1P25293 417 aaKnown RBP11.99□□□□□ -0.49
RSC8YFR037C NST1P53935 1240 aa11.98□□□□□ -0.49
RSC8YFR037C YMR196WQ04336 1088 aa11.98□□□□□ -0.49
RSC8YFR037C PRS1P32895 427 aaKnown RBP11.97□□□□□ -0.49
RSC8YFR037C KRE5P22023 1365 aa11.96□□□□□ -0.49
RSC8YFR037C CHZ1P40019 153 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 5,963 RNA–protein pairs in 26.1 ms