RNA–Protein interactions for RNA: YER171W

RAD3, Transcript of 5' to 3' DNA helicase, yeastyeast

Gene RAD3, Length 2,337 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RAD3YER171W RTT106P40161 455 aa8.34□□□□□ -1.08
RAD3YER171W ESC1Q03661 1658 aaKnown RBP8.32□□□□□ -1.08
RAD3YER171W TY3B-GQ99315 1547 aa8.31□□□□□ -1.08
RAD3YER171W TY1B-JR2P47100 1755 aaKnown RBP8.3□□□□□ -1.08
RAD3YER171W TY1B-ER2Q03619 1755 aa8.3□□□□□ -1.08
RAD3YER171W TY1B-MR1Q04214 1755 aa8.3□□□□□ -1.08
RAD3YER171W TY1B-MR2Q04670 1755 aaKnown RBP8.3□□□□□ -1.08
RAD3YER171W TY1B-LR1Q12088 1755 aaKnown RBP8.3□□□□□ -1.08
RAD3YER171W TY1B-NL1Q12112 1755 aa8.3□□□□□ -1.08
RAD3YER171W TY1B-GR1Q12141 1755 aa8.3□□□□□ -1.08
RAD3YER171W TY1B-BLQ12490 1755 aa8.3□□□□□ -1.08
RAD3YER171W DMA1P38823 416 aa8.3□□□□□ -1.08
RAD3YER171W DNF1P32660 1571 aa8.29□□□□□ -1.08
RAD3YER171W VPS15P22219 1454 aa8.27□□□□□ -1.09
RAD3YER171W GEA2P39993 1459 aaKnown RBP8.26□□□□□ -1.09
RAD3YER171W RPA190P10964 1664 aaKnown RBP8.24□□□□□ -1.09
RAD3YER171W CAT8P39113 1433 aa8.23□□□□□ -1.09
RAD3YER171W IRC20Q06554 1556 aa8.22□□□□□ -1.09
RAD3YER171W NUP159P40477 1460 aa8.21□□□□□ -1.1
RAD3YER171W NTE1Q04958 1679 aa8.21□□□□□ -1.1
RAD3YER171W RPO21P04050 1733 aaKnown RBP8.2□□□□□ -1.1
RAD3YER171W YBT1P32386 1661 aa8.19□□□□□ -1.1
RAD3YER171W MET10P39692 1035 aa8.19□□□□□ -1.1
RAD3YER171W CKB1P43639 278 aa8.19□□□□□ -1.1
RAD3YER171W GDB1Q06625 1536 aa8.17□□□□□ -1.1
RAD3YER171W SRB8P25648 1427 aa8.16□□□□□ -1.1
RAD3YER171W LEO1P38439 464 aa8.15□□□□□ -1.1
RAD3YER171W PDR10P51533 1564 aa8.14□□□□□ -1.11
RAD3YER171W NUP157P40064 1391 aaKnown RBP8.14□□□□□ -1.11
RAD3YER171W DIP2Q12220 943 aaPredicted RBP8.13□□□□□ -1.11
RAD3YER171W PDR12Q02785 1511 aa8.12□□□□□ -1.11
RAD3YER171W ARO1P08566 1588 aaKnown RBP8.12□□□□□ -1.11
RAD3YER171W POL5P39985 1022 aaKnown RBP8.11□□□□□ -1.11
RAD3YER171W BUD21Q08492 214 aaPredicted RBP8.09□□□□□ -1.11
RAD3YER171W MET5P47169 1442 aa8.09□□□□□ -1.11
RAD3YER171W SPO14P36126 1683 aa8.09□□□□□ -1.12
RAD3YER171W YRF1-1P0CX20 1796 aa8.07□□□□□ -1.12
RAD3YER171W YRF1-5P0CX21 1796 aa8.07□□□□□ -1.12
RAD3YER171W YRF1-8P0CX22 1796 aa8.07□□□□□ -1.12
RAD3YER171W YSP2Q06681 1438 aa8.07□□□□□ -1.12
RAD3YER171W NSR1P27476 414 aaKnown RBP RIP-Chip data8.06□□□□□ -1.12not detected
RAD3YER171W BUD3P25558 1636 aa8.05□□□□□ -1.12
RAD3YER171W MMS1Q06211 1407 aa8.03□□□□□ -1.12
RAD3YER171W NOP7P53261 605 aaKnown RBP8.02□□□□□ -1.13
RAD3YER171W GCN2P15442 1659 aa8□□□□□ -1.13
RAD3YER171W IQG1Q12280 1495 aa7.99□□□□□ -1.13
RAD3YER171W BNR1P40450 1375 aa7.97□□□□□ -1.13
RAD3YER171W PAF1P38351 445 aa7.96□□□□□ -1.13
RAD3YER171W SPT7P35177 1332 aa7.93□□□□□ -1.14
RAD3YER171W ENP1P38333 483 aaKnown RBP7.92□□□□□ -1.14
RAD3YER171W SEC7P11075 2009 aaKnown RBP7.92□□□□□ -1.14
RAD3YER171W ORC1P54784 914 aaPredicted RBP7.91□□□□□ -1.14
RAD3YER171W SEC3P33332 1336 aaKnown RBP7.91□□□□□ -1.14
RAD3YER171W LTE1P07866 1435 aa7.9□□□□□ -1.14
RAD3YER171W PDR5P33302 1511 aaKnown RBP7.87□□□□□ -1.15
RAD3YER171W YOR093CQ12275 1648 aa7.87□□□□□ -1.15
RAD3YER171W PDR11P40550 1411 aa7.86□□□□□ -1.15
RAD3YER171W RAV1P47104 1357 aa7.85□□□□□ -1.15
RAD3YER171W RTC1Q08281 1341 aa7.84□□□□□ -1.15
RAD3YER171W NOP2P40991 618 aaKnown RBP7.84□□□□□ -1.15
RAD3YER171W DRS2P39524 1355 aa7.84□□□□□ -1.16
RAD3YER171W TAF5P38129 798 aa7.83□□□□□ -1.16
RAD3YER171W MHP1P43638 1398 aa7.83□□□□□ -1.16
RAD3YER171W CHC1P22137 1653 aaKnown RBP7.83□□□□□ -1.16
RAD3YER171W TRM3Q07527 1436 aa7.83□□□□□ -1.16
RAD3YER171W LEU3P08638 886 aa7.83□□□□□ -1.16
RAD3YER171W PSD2P53037 1138 aaKnown RBP7.81□□□□□ -1.16
RAD3YER171W VMR1P38735 1592 aa7.79□□□□□ -1.16
RAD3YER171W ITT1Q04638 464 aa7.79□□□□□ -1.16
RAD3YER171W TY3B-IQ7LHG5 1498 aaKnown RBP7.78□□□□□ -1.16
RAD3YER171W KIP3P53086 805 aaKnown RBP7.78□□□□□ -1.16
RAD3YER171W DOP1Q03921 1698 aa7.78□□□□□ -1.16
RAD3YER171W ESL2P36168 1195 aa7.78□□□□□ -1.16
RAD3YER171W IML1P47170 1584 aa7.77□□□□□ -1.17
RAD3YER171W PDS5Q04264 1277 aa7.76□□□□□ -1.17
RAD3YER171W NUP188P52593 1655 aaKnown RBP7.76□□□□□ -1.17
RAD3YER171W TYS1P36421 394 aaKnown RBP7.75□□□□□ -1.17
RAD3YER171W IPL1P38991 367 aa7.74□□□□□ -1.17
RAD3YER171W YLR419WQ06698 1435 aaKnown RBP7.74□□□□□ -1.17
RAD3YER171W PRS1P32895 427 aaKnown RBP7.73□□□□□ -1.17
RAD3YER171W URN1Q06525 465 aaKnown RBP7.72□□□□□ -1.17
RAD3YER171W DNF2Q12675 1612 aa7.71□□□□□ -1.17
RAD3YER171W SPE2P21182 396 aa7.7□□□□□ -1.18
RAD3YER171W NST1P53935 1240 aa7.7□□□□□ -1.18
RAD3YER171W BNI1P41832 1953 aa7.69□□□□□ -1.18
RAD3YER171W NUP192P47054 1683 aa7.69□□□□□ -1.18
RAD3YER171W YAP3P38749 330 aa7.68□□□□□ -1.18
RAD3YER171W TAF8Q03750 510 aa7.67□□□□□ -1.18
RAD3YER171W ALD4P46367 519 aaKnown RBP7.67□□□□□ -1.18
RAD3YER171W RAD9P14737 1309 aa7.66□□□□□ -1.18
RAD3YER171W ABP1P15891 592 aaKnown RBP7.66□□□□□ -1.18
RAD3YER171W SCT1P32784 759 aa7.66□□□□□ -1.18
RAD3YER171W CAB1Q04430 367 aa7.64□□□□□ -1.19
RAD3YER171W RTG3P38165 486 aa7.63□□□□□ -1.19
RAD3YER171W CHZ1P40019 153 aaPredicted RBP7.63□□□□□ -1.19
RAD3YER171W BCK1Q01389 1478 aa7.61□□□□□ -1.19
RAD3YER171W FKH1P40466 484 aa7.6□□□□□ -1.19
RAD3YER171W NAP1P25293 417 aaKnown RBP7.59□□□□□ -1.19
RAD3YER171W DMA2P53924 522 aa7.57□□□□□ -1.2
RAD3YER171W MRX12P47084 519 aa7.55□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms