RNA–Protein interactions for RNA: YER146W

LSM5, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM5, Length 282 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM5	YER146W	MET5	P47169	1442 aa		13.52	□□□□□ -0.25
LSM5	YER146W	ULS1	Q08562	1619 aa		13.49	□□□□□ -0.25
LSM5	YER146W	PDR15	Q04182	1529 aa	Known RBP	13.48	□□□□□ -0.25
LSM5	YER146W	MLP2	P40457	1679 aa		13.47	□□□□□ -0.25
LSM5	YER146W	NTE1	Q04958	1679 aa		13.44	□□□□□ -0.26
LSM5	YER146W	RPO21	P04050	1733 aa	Known RBP	13.42	□□□□□ -0.26
LSM5	YER146W	NUP159	P40477	1460 aa		13.42	□□□□□ -0.26
LSM5	YER146W	GEA1	P47102	1408 aa	Predicted RBP	13.39	□□□□□ -0.27
LSM5	YER146W	GEA2	P39993	1459 aa	Known RBP	13.37	□□□□□ -0.27
LSM5	YER146W	IRC20	Q06554	1556 aa		13.34	□□□□□ -0.27
LSM5	YER146W	YRF1-1	P0CX20	1796 aa		13.31	□□□□□ -0.28
LSM5	YER146W	YRF1-5	P0CX21	1796 aa		13.31	□□□□□ -0.28
LSM5	YER146W	YRF1-8	P0CX22	1796 aa		13.31	□□□□□ -0.28
LSM5	YER146W	PDR12	Q02785	1511 aa		13.3	□□□□□ -0.28
LSM5	YER146W	TY3B-G	Q99315	1547 aa		13.29	□□□□□ -0.28
LSM5	YER146W	RTT106	P40161	455 aa		13.28	□□□□□ -0.28
LSM5	YER146W	NUP170	P38181	1502 aa		13.27	□□□□□ -0.29
LSM5	YER146W	IFH1	P39520	1085 aa		13.26	□□□□□ -0.29
LSM5	YER146W	IKI3	Q06706	1349 aa	Known RBP	13.26	□□□□□ -0.29
LSM5	YER146W	MET10	P39692	1035 aa		13.25	□□□□□ -0.29
LSM5	YER146W	VPS15	P22219	1454 aa		13.24	□□□□□ -0.29
LSM5	YER146W	CAT8	P39113	1433 aa		13.24	□□□□□ -0.29
LSM5	YER146W	LTE1	P07866	1435 aa		13.19	□□□□□ -0.3
LSM5	YER146W	GDB1	Q06625	1536 aa		13.18	□□□□□ -0.3
LSM5	YER146W	SPO14	P36126	1683 aa		13.18	□□□□□ -0.3
LSM5	YER146W	YBT1	P32386	1661 aa		13.16	□□□□□ -0.3
LSM5	YER146W	PDR10	P51533	1564 aa		13.15	□□□□□ -0.3
LSM5	YER146W	NUP157	P40064	1391 aa	Known RBP	13.1	□□□□□ -0.31
LSM5	YER146W	ARO1	P08566	1588 aa	Known RBP	13.05	□□□□□ -0.32
LSM5	YER146W	SSM4	P40318	1319 aa		13.05	□□□□□ -0.32
LSM5	YER146W	IQG1	Q12280	1495 aa		13.03	□□□□□ -0.32
LSM5	YER146W	BUD3	P25558	1636 aa		13	□□□□□ -0.33
LSM5	YER146W	SRB8	P25648	1427 aa		13	□□□□□ -0.33
LSM5	YER146W	YSP2	Q06681	1438 aa		12.99	□□□□□ -0.33
LSM5	YER146W	BNI1	P41832	1953 aa		12.94	□□□□□ -0.34
LSM5	YER146W	DRS2	P39524	1355 aa		12.94	□□□□□ -0.34
LSM5	YER146W	MMS1	Q06211	1407 aa		12.9	□□□□□ -0.34
LSM5	YER146W	TRM3	Q07527	1436 aa		12.9	□□□□□ -0.34
LSM5	YER146W	CKB1	P43639	278 aa		12.9	□□□□□ -0.34
LSM5	YER146W	ITT1	Q04638	464 aa		12.88	□□□□□ -0.35
LSM5	YER146W	SEC7	P11075	2009 aa	Known RBP	12.88	□□□□□ -0.35
LSM5	YER146W	DOP1	Q03921	1698 aa		12.84	□□□□□ -0.35
LSM5	YER146W	BNR1	P40450	1375 aa		12.81	□□□□□ -0.36
LSM5	YER146W	BUD21	Q08492	214 aa	Predicted RBP	12.77	□□□□□ -0.37
LSM5	YER146W	CHC1	P22137	1653 aa	Known RBP	12.75	□□□□□ -0.37
LSM5	YER146W	GCN2	P15442	1659 aa		12.72	□□□□□ -0.37
LSM5	YER146W	PDR5	P33302	1511 aa	Known RBP	12.61	□□□□□ -0.39
LSM5	YER146W	DNF2	Q12675	1612 aa		12.59	□□□□□ -0.39
LSM5	YER146W	YOR093C	Q12275	1648 aa		12.59	□□□□□ -0.39
LSM5	YER146W	NUP188	P52593	1655 aa	Known RBP	12.55	□□□□□ -0.4
LSM5	YER146W	VMR1	P38735	1592 aa		12.55	□□□□□ -0.4
LSM5	YER146W	URN1	Q06525	465 aa	Known RBP	12.5	□□□□□ -0.41
LSM5	YER146W	PDR11	P40550	1411 aa		12.5	□□□□□ -0.41
LSM5	YER146W	HAP1	P0CE41	1502 aa		12.48	□□□□□ -0.41
LSM5	YER146W	IML1	P47170	1584 aa		12.47	□□□□□ -0.41
LSM5	YER146W	RAV1	P47104	1357 aa		12.47	□□□□□ -0.41
LSM5	YER146W	YAP3	P38749	330 aa		12.47	□□□□□ -0.41
LSM5	YER146W	IPL1	P38991	367 aa		12.46	□□□□□ -0.41
LSM5	YER146W	PAF1	P38351	445 aa		12.43	□□□□□ -0.42
LSM5	YER146W	BFR2	Q06631	534 aa	Known RBP	12.42	□□□□□ -0.42
LSM5	YER146W	RTC1	Q08281	1341 aa		12.41	□□□□□ -0.42
LSM5	YER146W	NOP7	P53261	605 aa	Known RBP	12.41	□□□□□ -0.42
LSM5	YER146W	TYS1	P36421	394 aa	Known RBP	12.37	□□□□□ -0.43
LSM5	YER146W	DNF3	Q12674	1656 aa		12.34	□□□□□ -0.43
LSM5	YER146W	ABP1	P15891	592 aa	Known RBP	12.33	□□□□□ -0.44
LSM5	YER146W	NUP192	P47054	1683 aa		12.27	□□□□□ -0.45
LSM5	YER146W	TY3B-I	Q7LHG5	1498 aa	Known RBP	12.27	□□□□□ -0.45
LSM5	YER146W	POL5	P39985	1022 aa	Known RBP	12.22	□□□□□ -0.45
LSM5	YER146W	ESL2	P36168	1195 aa		12.21	□□□□□ -0.45
LSM5	YER146W	MAK10	Q02197	733 aa		12.21	□□□□□ -0.45
LSM5	YER146W	BCK1	Q01389	1478 aa		12.19	□□□□□ -0.46
LSM5	YER146W	ALD4	P46367	519 aa	Known RBP	12.17	□□□□□ -0.46
LSM5	YER146W	TAF5	P38129	798 aa		12.13	□□□□□ -0.47
LSM5	YER146W	RAD9	P14737	1309 aa		12.12	□□□□□ -0.47
LSM5	YER146W	CFT1	Q06632	1357 aa	Known RBP	12.11	□□□□□ -0.47
LSM5	YER146W	YLR419W	Q06698	1435 aa	Known RBP	12.09	□□□□□ -0.47
LSM5	YER146W	MIF2	P35201	549 aa		12.07	□□□□□ -0.48
LSM5	YER146W	KIP3	P53086	805 aa	Known RBP	12.06	□□□□□ -0.48
LSM5	YER146W	CAB1	Q04430	367 aa		12.06	□□□□□ -0.48
LSM5	YER146W	TY1B-NL2	Q99337	1749 aa	Known RBP	12.06	□□□□□ -0.48
LSM5	YER146W	MHP1	P43638	1398 aa		12.05	□□□□□ -0.48
LSM5	YER146W	SCT1	P32784	759 aa		12.04	□□□□□ -0.48
LSM5	YER146W	KRE5	P22023	1365 aa		12.04	□□□□□ -0.48
LSM5	YER146W	SPE2	P21182	396 aa		12.03	□□□□□ -0.48
LSM5	YER146W	TAF8	Q03750	510 aa		12.03	□□□□□ -0.48
LSM5	YER146W	MRX12	P47084	519 aa		12.01	□□□□□ -0.49
LSM5	YER146W	NAP1	P25293	417 aa	Known RBP	11.99	□□□□□ -0.49
LSM5	YER146W	SEC3	P33332	1336 aa	Known RBP	11.98	□□□□□ -0.49
LSM5	YER146W	RIA1	P53893	1110 aa		11.97	□□□□□ -0.49
LSM5	YER146W	YMR196W	Q04336	1088 aa		11.97	□□□□□ -0.49
LSM5	YER146W	ORC1	P54784	914 aa	Predicted RBP	11.96	□□□□□ -0.49
LSM5	YER146W	YNR029C	P53729	429 aa	Known RBP	11.94	□□□□□ -0.5
LSM5	YER146W	USO1	P25386	1790 aa		11.94	□□□□□ -0.5
LSM5	YER146W	CHZ1	P40019	153 aa	Predicted RBP	11.89	□□□□□ -0.51
LSM5	YER146W	PDS5	Q04264	1277 aa		11.89	□□□□□ -0.51
LSM5	YER146W	PSK1	P31374	1356 aa		11.89	□□□□□ -0.51
LSM5	YER146W	FKH1	P40466	484 aa		11.87	□□□□□ -0.51
LSM5	YER146W	CPS1	P27614	576 aa		11.85	□□□□□ -0.51
LSM5	YER146W	YML133C	Q03099	1374 aa		11.84	□□□□□ -0.51
LSM5	YER146W	YLL067C	Q07888	1374 aa		11.84	□□□□□ -0.51

Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms