RNA–Protein interactions for RNA: YER021W

RPN3, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome lid, yeastyeast

Gene RPN3, Length 1,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN3YER021W HTA2P04912 132 aa7.14□□□□□ -1.27
RPN3YER021W ABP1P15891 592 aaKnown RBP7.14□□□□□ -1.27
RPN3YER021W MGA2P40578 1113 aa7.13□□□□□ -1.27
RPN3YER021W YDR344CQ05510 147 aa7.13□□□□□ -1.27
RPN3YER021W PTC4P38089 393 aa7.12□□□□□ -1.27
RPN3YER021W YEL023CP39992 682 aa7.12□□□□□ -1.27
RPN3YER021W VRP1P37370 817 aa7.08□□□□□ -1.28
RPN3YER021W XDJ1P39102 459 aa7.08□□□□□ -1.28
RPN3YER021W PML39Q03760 334 aa7.01□□□□□ -1.29
RPN3YER021W ELP4Q02884 456 aaKnown RBP6.99□□□□□ -1.29
RPN3YER021W DPS1P04802 557 aaKnown RBP6.96□□□□□ -1.29
RPN3YER021W GRE2Q12068 342 aaKnown RBP6.95□□□□□ -1.3
RPN3YER021W RQC2Q12532 1038 aaKnown RBP6.92□□□□□ -1.3
RPN3YER021W ARH1P48360 493 aa6.91□□□□□ -1.3
RPN3YER021W MID1P41821 548 aa6.91□□□□□ -1.3
RPN3YER021W RGA2Q06407 1009 aa6.89□□□□□ -1.31
RPN3YER021W NST1P53935 1240 aa6.88□□□□□ -1.31
RPN3YER021W DMA1P38823 416 aa6.87□□□□□ -1.31
RPN3YER021W SRC1Q03707 834 aa6.87□□□□□ -1.31
RPN3YER021W EDS1P38073 919 aa6.86□□□□□ -1.31
RPN3YER021W GUT1P32190 709 aa6.85□□□□□ -1.31
RPN3YER021W ATH1P48016 1211 aa6.85□□□□□ -1.31
RPN3YER021W PTC3P34221 468 aaKnown RBP6.84□□□□□ -1.31
RPN3YER021W MIF2P35201 549 aa6.84□□□□□ -1.31
RPN3YER021W SPT23P35210 1082 aa6.83□□□□□ -1.32
RPN3YER021W SOL3P38858 249 aa6.83□□□□□ -1.32
RPN3YER021W RAM2P29703 316 aa6.79□□□□□ -1.32
RPN3YER021W ILV3P39522 585 aaKnown RBP6.78□□□□□ -1.32
RPN3YER021W PEX29Q03370 554 aa6.78□□□□□ -1.32
RPN3YER021W MAK11P20484 414 aaKnown RBP6.77□□□□□ -1.33
RPN3YER021W MPH3P0CE00 602 aa6.76□□□□□ -1.33
RPN3YER021W RGA1P39083 1007 aa6.76□□□□□ -1.33
RPN3YER021W HAP5Q02516 242 aa6.75□□□□□ -1.33
RPN3YER021W AI4P03878 556 aa6.74□□□□□ -1.33
RPN3YER021W BNI4P53858 892 aa6.73□□□□□ -1.33
RPN3YER021W YML082WQ04533 649 aaKnown RBP6.72□□□□□ -1.33
RPN3YER021W COQ8P27697 501 aa6.7□□□□□ -1.34
RPN3YER021W PTC2P39966 464 aaKnown RBP6.69□□□□□ -1.34
RPN3YER021W MPC54Q08550 464 aa6.69□□□□□ -1.34
RPN3YER021W RAS1P01119 309 aa6.67□□□□□ -1.34
RPN3YER021W NMA111P53920 997 aa6.63□□□□□ -1.35
RPN3YER021W YGR273CP53329 174 aa6.62□□□□□ -1.35
RPN3YER021W YPR015CQ12531 247 aa6.62□□□□□ -1.35
RPN3YER021W SET1P38827 1080 aaKnown RBP6.6□□□□□ -1.35
RPN3YER021W SLI15P38283 698 aa6.59□□□□□ -1.35
RPN3YER021W RAM1P22007 431 aa6.57□□□□□ -1.36
RPN3YER021W DPL1Q05567 589 aa6.56□□□□□ -1.36
RPN3YER021W SAS10Q12136 610 aaPredicted RBP6.56□□□□□ -1.36
RPN3YER021W NOP53Q12080 455 aaKnown RBP6.51□□□□□ -1.37
RPN3YER021W TRK1P12685 1235 aa6.5□□□□□ -1.37
RPN3YER021W AMS1P22855 1083 aa6.5□□□□□ -1.37
RPN3YER021W YPR148CQ06523 435 aa6.49□□□□□ -1.37
RPN3YER021W SDH2P21801 266 aa6.48□□□□□ -1.37
RPN3YER021W ISU2Q12056 156 aa6.48□□□□□ -1.37
RPN3YER021W IFH1P39520 1085 aa6.47□□□□□ -1.37
RPN3YER021W GYP1Q08484 637 aa6.46□□□□□ -1.38
RPN3YER021W CDC73Q06697 393 aa6.45□□□□□ -1.38
RPN3YER021W KEX1P09620 729 aa6.44□□□□□ -1.38
RPN3YER021W VPS70P47161 811 aa6.44□□□□□ -1.38
RPN3YER021W PDR1P12383 1068 aa6.44□□□□□ -1.38
RPN3YER021W CKB1P43639 278 aa6.37□□□□□ -1.39
RPN3YER021W YPL062WQ02781 134 aa6.36□□□□□ -1.39
RPN3YER021W SAS4Q04003 481 aa6.36□□□□□ -1.39
RPN3YER021W YLR326WQ06170 240 aaKnown RBP6.34□□□□□ -1.39
RPN3YER021W UBP14P38237 781 aaKnown RBP6.33□□□□□ -1.4
RPN3YER021W YEL077CQ3E7X8 1277 aa6.32□□□□□ -1.4
RPN3YER021W REF2P42073 533 aaPredicted RBP6.31□□□□□ -1.4
RPN3YER021W PCS60P38137 543 aaKnown RBP RIP-Chip data6.3□□□□□ -1.4not detected
RPN3YER021W PBS2P08018 668 aa6.29□□□□□ -1.4
RPN3YER021W VHR2P40041 505 aa6.29□□□□□ -1.4
RPN3YER021W BUD20Q08004 166 aaPredicted RBP6.29□□□□□ -1.4
RPN3YER021W SPB4P25808 606 aaPredicted RBP6.28□□□□□ -1.4
RPN3YER021W LEU3P08638 886 aa6.27□□□□□ -1.41
RPN3YER021W DSF2P38213 736 aa6.27□□□□□ -1.41
RPN3YER021W YDR090CQ03193 310 aa6.26□□□□□ -1.41
RPN3YER021W MRF1P30775 413 aaPredicted RBP6.25□□□□□ -1.41
RPN3YER021W AIR1P40507 360 aaKnown RBP6.25□□□□□ -1.41
RPN3YER021W CLA4P48562 842 aa6.24□□□□□ -1.41
RPN3YER021W COX6P00427 148 aa6.23□□□□□ -1.41
RPN3YER021W PRT1P06103 763 aaKnown RBP6.23□□□□□ -1.41
RPN3YER021W RAD54P32863 898 aa6.23□□□□□ -1.41
RPN3YER021W MAK21Q12176 1025 aaKnown RBP6.23□□□□□ -1.41
RPN3YER021W BRE2P43132 505 aa6.23□□□□□ -1.41
RPN3YER021W STR2P47164 639 aa6.23□□□□□ -1.41
RPN3YER021W GAR1P28007 205 aaKnown RBP6.21□□□□□ -1.42
RPN3YER021W CST6P40535 587 aa6.21□□□□□ -1.42
RPN3YER021W YRR1Q12172 810 aa6.21□□□□□ -1.42
RPN3YER021W MAM3Q12296 706 aa6.21□□□□□ -1.42
RPN3YER021W ISM1P48526 1002 aa6.2□□□□□ -1.42
RPN3YER021W RPP1BP10622 106 aaKnown RBP6.18□□□□□ -1.42
RPN3YER021W IES2P40154 320 aa6.18□□□□□ -1.42
RPN3YER021W ERG12P07277 443 aa6.17□□□□□ -1.42
RPN3YER021W KIC1P38692 1080 aa6.17□□□□□ -1.42
RPN3YER021W GAP1P19145 602 aaPredicted RBP6.15□□□□□ -1.42
RPN3YER021W NUP42P49686 430 aaKnown RBP6.15□□□□□ -1.42
RPN3YER021W GCR2Q01722 534 aa6.15□□□□□ -1.42
RPN3YER021W LAM6Q08001 693 aa6.14□□□□□ -1.43
RPN3YER021W GBP2P25555 427 aaKnown RBP RIP-Chip data6.14□□□□□ -1.43not detected
RPN3YER021W DIT2P21595 489 aa6.13□□□□□ -1.43
RPN3YER021W NUD1P32336 851 aa6.13□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms