RNA–Protein interactions for RNA: YDR504C

SPG3, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG3, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG3YDR504C HTA1P04911 132 aaKnown RBP8.57□□□□□ -1.04
SPG3YDR504C HTA2P04912 132 aa8.57□□□□□ -1.04
SPG3YDR504C DCW1P36091 449 aa8.56□□□□□ -1.04
SPG3YDR504C YEL023CP39992 682 aa8.56□□□□□ -1.04
SPG3YDR504C RTG3P38165 486 aa8.54□□□□□ -1.04
SPG3YDR504C ELP4Q02884 456 aaKnown RBP8.53□□□□□ -1.04
SPG3YDR504C SRC1Q03707 834 aa8.49□□□□□ -1.05
SPG3YDR504C PML39Q03760 334 aa8.45□□□□□ -1.06
SPG3YDR504C ARH1P48360 493 aa8.36□□□□□ -1.07
SPG3YDR504C CST9Q06032 482 aa8.35□□□□□ -1.07
SPG3YDR504C RCR1P38212 213 aa8.32□□□□□ -1.08
SPG3YDR504C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.3□□□□□ -1.08not detected
SPG3YDR504C SPT23P35210 1082 aa8.27□□□□□ -1.09
SPG3YDR504C MID1P41821 548 aa8.26□□□□□ -1.09
SPG3YDR504C GRE2Q12068 342 aaKnown RBP8.2□□□□□ -1.1
SPG3YDR504C SSP1P38871 571 aa8.19□□□□□ -1.1
SPG3YDR504C MGA2P40578 1113 aa8.18□□□□□ -1.1
SPG3YDR504C RAS1P01119 309 aa8.15□□□□□ -1.1
SPG3YDR504C PEX29Q03370 554 aa8.14□□□□□ -1.11
SPG3YDR504C HAP5Q02516 242 aa8.13□□□□□ -1.11
SPG3YDR504C YML082WQ04533 649 aaKnown RBP8.12□□□□□ -1.11
SPG3YDR504C PTC2P39966 464 aaKnown RBP8.09□□□□□ -1.11
SPG3YDR504C BNI4P53858 892 aa8.09□□□□□ -1.11
SPG3YDR504C ATH1P48016 1211 aa8.07□□□□□ -1.12
SPG3YDR504C NST1P53935 1240 aa8.06□□□□□ -1.12
SPG3YDR504C GUT1P32190 709 aa8.05□□□□□ -1.12
SPG3YDR504C TFA1P36100 482 aa8.03□□□□□ -1.12
SPG3YDR504C TRK1P12685 1235 aa8.01□□□□□ -1.13
SPG3YDR504C YPL062WQ02781 134 aa8□□□□□ -1.13
SPG3YDR504C MIF2P35201 549 aa7.98□□□□□ -1.13
SPG3YDR504C MPH3P0CE00 602 aa7.97□□□□□ -1.13
SPG3YDR504C PTC3P34221 468 aaKnown RBP7.97□□□□□ -1.13
SPG3YDR504C SOL3P38858 249 aa7.97□□□□□ -1.13
SPG3YDR504C AI4P03878 556 aa7.95□□□□□ -1.14
SPG3YDR504C EDS1P38073 919 aa7.92□□□□□ -1.14
SPG3YDR504C MPC54Q08550 464 aa7.92□□□□□ -1.14
SPG3YDR504C ILV3P39522 585 aaKnown RBP7.9□□□□□ -1.14
SPG3YDR504C NMA111P53920 997 aa7.9□□□□□ -1.14
SPG3YDR504C AMS1P22855 1083 aa7.89□□□□□ -1.15
SPG3YDR504C YPR015CQ12531 247 aa7.86□□□□□ -1.15
SPG3YDR504C GYP1Q08484 637 aa7.81□□□□□ -1.16
SPG3YDR504C MAK11P20484 414 aaKnown RBP7.79□□□□□ -1.16
SPG3YDR504C RAM1P22007 431 aa7.76□□□□□ -1.17
SPG3YDR504C DPL1Q05567 589 aa7.76□□□□□ -1.17
SPG3YDR504C SDH2P21801 266 aa7.72□□□□□ -1.17
SPG3YDR504C SLI15P38283 698 aa7.72□□□□□ -1.17
SPG3YDR504C GAR1P28007 205 aaKnown RBP7.71□□□□□ -1.18
SPG3YDR504C YGR273CP53329 174 aa7.71□□□□□ -1.18
SPG3YDR504C COQ8P27697 501 aa7.7□□□□□ -1.18
SPG3YDR504C GBP2P25555 427 aaKnown RBP RIP-Chip data7.69□□□□□ -1.18not detected
SPG3YDR504C RAM2P29703 316 aa7.67□□□□□ -1.18
SPG3YDR504C SAS4Q04003 481 aa7.66□□□□□ -1.18
SPG3YDR504C ISU2Q12056 156 aa7.66□□□□□ -1.18
SPG3YDR504C YEL077CQ3E7X8 1277 aa7.64□□□□□ -1.19
SPG3YDR504C BRE2P43132 505 aa7.61□□□□□ -1.19
SPG3YDR504C PDR1P12383 1068 aa7.58□□□□□ -1.2
SPG3YDR504C GCR2Q01722 534 aa7.57□□□□□ -1.2
SPG3YDR504C MRF1P30775 413 aaPredicted RBP7.53□□□□□ -1.2
SPG3YDR504C CDC73Q06697 393 aa7.52□□□□□ -1.21
SPG3YDR504C AIR1P40507 360 aaKnown RBP7.51□□□□□ -1.21
SPG3YDR504C NOP53Q12080 455 aaKnown RBP7.47□□□□□ -1.21
SPG3YDR504C KEX1P09620 729 aa7.44□□□□□ -1.22
SPG3YDR504C CLA4P48562 842 aa7.43□□□□□ -1.22
SPG3YDR504C MET22P32179 357 aa7.41□□□□□ -1.22
SPG3YDR504C ERG12P07277 443 aa7.4□□□□□ -1.22
SPG3YDR504C BUD20Q08004 166 aaPredicted RBP7.4□□□□□ -1.22
SPG3YDR504C PRT1P06103 763 aaKnown RBP7.38□□□□□ -1.23
SPG3YDR504C CST6P40535 587 aa7.36□□□□□ -1.23
SPG3YDR504C ENV9Q08651 330 aa7.35□□□□□ -1.23
SPG3YDR504C CDC4P07834 779 aa7.28□□□□□ -1.24
SPG3YDR504C YDR444WQ04093 687 aa7.28□□□□□ -1.24
SPG3YDR504C LAM6Q08001 693 aa7.27□□□□□ -1.25
SPG3YDR504C STR2P47164 639 aa7.25□□□□□ -1.25
SPG3YDR504C ISM1P48526 1002 aa7.24□□□□□ -1.25
SPG3YDR504C MTC5Q03897 1148 aa7.24□□□□□ -1.25
SPG3YDR504C YLR326WQ06170 240 aaKnown RBP7.24□□□□□ -1.25
SPG3YDR504C RPP1BP10622 106 aaKnown RBP7.23□□□□□ -1.25
SPG3YDR504C UBP14P38237 781 aaKnown RBP7.23□□□□□ -1.25
SPG3YDR504C YDL176WQ12027 708 aa7.23□□□□□ -1.25
SPG3YDR504C YRR1Q12172 810 aa7.23□□□□□ -1.25
SPG3YDR504C PCS60P38137 543 aaKnown RBP RIP-Chip data7.22□□□□□ -1.25not detected
SPG3YDR504C FRK1Q03002 865 aaPredicted RBP7.22□□□□□ -1.25
SPG3YDR504C VHR2P40041 505 aa7.18□□□□□ -1.26
SPG3YDR504C SPT16P32558 1035 aaKnown RBP7.17□□□□□ -1.26
SPG3YDR504C LCB5Q06147 687 aaKnown RBP7.17□□□□□ -1.26
SPG3YDR504C RAD54P32863 898 aa7.16□□□□□ -1.26
SPG3YDR504C PEX21P50091 288 aa7.15□□□□□ -1.26
SPG3YDR504C NUD1P32336 851 aa7.14□□□□□ -1.27
SPG3YDR504C BDP1P46678 594 aa7.13□□□□□ -1.27
SPG3YDR504C GCD11P32481 527 aaKnown RBP7.12□□□□□ -1.27
SPG3YDR504C HED1Q03937 162 aa7.12□□□□□ -1.27
SPG3YDR504C NPL4P33755 580 aa7.1□□□□□ -1.27
SPG3YDR504C SEC2P17065 759 aa7.09□□□□□ -1.27
SPG3YDR504C TY1A-DR4O74302 440 aa7.08□□□□□ -1.28
SPG3YDR504C TY1A-HP0C2I4 478 aaKnown RBP7.08□□□□□ -1.28
SPG3YDR504C TY1A-AP0CX57 440 aa7.08□□□□□ -1.28
SPG3YDR504C TY1A-PR1P0CX58 440 aa7.08□□□□□ -1.28
SPG3YDR504C TY1A-ORP0CX59 440 aa7.08□□□□□ -1.28
SPG3YDR504C TY1A-PR2P0CX60 440 aa7.08□□□□□ -1.28
SPG3YDR504C TY1A-DR5P0CX65 440 aa7.08□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 24.9 ms