RNA–Protein interactions for RNA: YDR439W

LRS4, Transcript of Nucleolar protein that forms a complex with Csm1p, yeastyeast

Gene LRS4, Length 1,044 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LRS4YDR439W SAP30P38429 201 aa8.98□□□□□ -0.97
LRS4YDR439W YEL023CP39992 682 aa8.97□□□□□ -0.97
LRS4YDR439W MAK11P20484 414 aaKnown RBP8.93□□□□□ -0.98
LRS4YDR439W GRE2Q12068 342 aaKnown RBP8.93□□□□□ -0.98
LRS4YDR439W CHL1P22516 861 aaPredicted RBP8.91□□□□□ -0.98
LRS4YDR439W RAM2P29703 316 aa8.9□□□□□ -0.98
LRS4YDR439W MIF2P35201 549 aa8.89□□□□□ -0.99
LRS4YDR439W PRE3P38624 215 aa8.87□□□□□ -0.99
LRS4YDR439W BCK2P33306 851 aa8.86□□□□□ -0.99
LRS4YDR439W ATH1P48016 1211 aa8.86□□□□□ -0.99
LRS4YDR439W GUT1P32190 709 aa8.85□□□□□ -0.99
LRS4YDR439W PTC3P34221 468 aaKnown RBP8.85□□□□□ -0.99
LRS4YDR439W EDS1P38073 919 aa8.84□□□□□ -0.99
LRS4YDR439W PML39Q03760 334 aa8.8□□□□□ -1
LRS4YDR439W COQ8P27697 501 aa8.79□□□□□ -1
LRS4YDR439W NST1P53935 1240 aa8.75□□□□□ -1.01
LRS4YDR439W ELP4Q02884 456 aaKnown RBP8.72□□□□□ -1.01
LRS4YDR439W SOL3P38858 249 aa8.71□□□□□ -1.02
LRS4YDR439W NOP53Q12080 455 aaKnown RBP8.71□□□□□ -1.02
LRS4YDR439W YDR344CQ05510 147 aa8.7□□□□□ -1.02
LRS4YDR439W MPH3P0CE00 602 aa8.69□□□□□ -1.02
LRS4YDR439W AI4P03878 556 aa8.68□□□□□ -1.02
LRS4YDR439W ARH1P48360 493 aa8.68□□□□□ -1.02
LRS4YDR439W VRP1P37370 817 aa8.67□□□□□ -1.02
LRS4YDR439W MID1P41821 548 aa8.67□□□□□ -1.02
LRS4YDR439W XDJ1P39102 459 aa8.66□□□□□ -1.02
LRS4YDR439W PEX29Q03370 554 aa8.62□□□□□ -1.03
LRS4YDR439W SPT23P35210 1082 aa8.59□□□□□ -1.03
LRS4YDR439W ILV3P39522 585 aaKnown RBP8.59□□□□□ -1.03
LRS4YDR439W YGR273CP53329 174 aa8.59□□□□□ -1.03
LRS4YDR439W HAP5Q02516 242 aa8.56□□□□□ -1.04
LRS4YDR439W BNI4P53858 892 aa8.51□□□□□ -1.05
LRS4YDR439W MPC54Q08550 464 aa8.51□□□□□ -1.05
LRS4YDR439W SLI15P38283 698 aa8.47□□□□□ -1.05
LRS4YDR439W PTC2P39966 464 aaKnown RBP8.47□□□□□ -1.05
LRS4YDR439W YML082WQ04533 649 aaKnown RBP8.47□□□□□ -1.05
LRS4YDR439W DPS1P04802 557 aaKnown RBP8.46□□□□□ -1.06
LRS4YDR439W NMA111P53920 997 aa8.45□□□□□ -1.06
LRS4YDR439W DPL1Q05567 589 aa8.43□□□□□ -1.06
LRS4YDR439W KEX1P09620 729 aa8.41□□□□□ -1.06
LRS4YDR439W SET1P38827 1080 aaKnown RBP8.41□□□□□ -1.06
LRS4YDR439W ISU2Q12056 156 aa8.36□□□□□ -1.07
LRS4YDR439W UBP14P38237 781 aaKnown RBP8.32□□□□□ -1.08
LRS4YDR439W YLR326WQ06170 240 aaKnown RBP8.32□□□□□ -1.08
LRS4YDR439W CDC73Q06697 393 aa8.3□□□□□ -1.08
LRS4YDR439W VHR2P40041 505 aa8.29□□□□□ -1.08
LRS4YDR439W RAM1P22007 431 aa8.28□□□□□ -1.08
LRS4YDR439W YPR015CQ12531 247 aa8.28□□□□□ -1.08
LRS4YDR439W PCS60P38137 543 aaKnown RBP RIP-Chip data8.26□□□□□ -1.09not detected
LRS4YDR439W RAD54P32863 898 aa8.25□□□□□ -1.09
LRS4YDR439W RPP1BP10622 106 aaKnown RBP8.24□□□□□ -1.09
LRS4YDR439W SRC1Q03707 834 aa8.24□□□□□ -1.09
LRS4YDR439W IFH1P39520 1085 aa8.23□□□□□ -1.09
LRS4YDR439W GYP1Q08484 637 aa8.2□□□□□ -1.1
LRS4YDR439W PDR1P12383 1068 aa8.18□□□□□ -1.1
LRS4YDR439W RAS1P01119 309 aa8.17□□□□□ -1.1
LRS4YDR439W SAS4Q04003 481 aa8.17□□□□□ -1.1
LRS4YDR439W YDR090CQ03193 310 aa8.16□□□□□ -1.1
LRS4YDR439W KIC1P38692 1080 aa8.15□□□□□ -1.1
LRS4YDR439W AMS1P22855 1083 aa8.12□□□□□ -1.11
LRS4YDR439W YPR148CQ06523 435 aa8.12□□□□□ -1.11
LRS4YDR439W REF2P42073 533 aaPredicted RBP8.1□□□□□ -1.11
LRS4YDR439W PEX21P50091 288 aa8.1□□□□□ -1.11
LRS4YDR439W GAP1P19145 602 aaPredicted RBP8.08□□□□□ -1.12
LRS4YDR439W CSC1Q06538 782 aa8.08□□□□□ -1.12
LRS4YDR439W SDH2P21801 266 aa8.07□□□□□ -1.12
LRS4YDR439W TFB4Q12004 338 aa8.07□□□□□ -1.12
LRS4YDR439W YRR1Q12172 810 aa8.07□□□□□ -1.12
LRS4YDR439W MRF1P30775 413 aaPredicted RBP8.05□□□□□ -1.12
LRS4YDR439W BUD20Q08004 166 aaPredicted RBP8.05□□□□□ -1.12
LRS4YDR439W YEL077CQ3E7X8 1277 aa8.05□□□□□ -1.12
LRS4YDR439W TRK1P12685 1235 aa8.03□□□□□ -1.12
LRS4YDR439W PRT1P06103 763 aaKnown RBP8.02□□□□□ -1.13
LRS4YDR439W MAK21Q12176 1025 aaKnown RBP8.01□□□□□ -1.13
LRS4YDR439W STR2P47164 639 aa8□□□□□ -1.13
LRS4YDR439W TUM1Q08686 304 aaKnown RBP8□□□□□ -1.13
LRS4YDR439W ORC6P38826 435 aa7.99□□□□□ -1.13
LRS4YDR439W VPS70P47161 811 aa7.99□□□□□ -1.13
LRS4YDR439W ISM1P48526 1002 aa7.99□□□□□ -1.13
LRS4YDR439W COX6P00427 148 aa7.98□□□□□ -1.13
LRS4YDR439W NUD1P32336 851 aa7.98□□□□□ -1.13
LRS4YDR439W NPL4P33755 580 aa7.96□□□□□ -1.14
LRS4YDR439W ERG12P07277 443 aa7.93□□□□□ -1.14
LRS4YDR439W MVP1P40959 511 aaKnown RBP7.93□□□□□ -1.14
LRS4YDR439W RGA1P39083 1007 aa7.91□□□□□ -1.14
LRS4YDR439W GCD11P32481 527 aaKnown RBP7.9□□□□□ -1.14
LRS4YDR439W YPR109WQ06104 294 aa7.88□□□□□ -1.15
LRS4YDR439W TY1A-DR4O74302 440 aa7.87□□□□□ -1.15
LRS4YDR439W TY1A-HP0C2I4 478 aaKnown RBP7.87□□□□□ -1.15
LRS4YDR439W TY1A-AP0CX57 440 aa7.87□□□□□ -1.15
LRS4YDR439W TY1A-PR1P0CX58 440 aa7.87□□□□□ -1.15
LRS4YDR439W TY1A-ORP0CX59 440 aa7.87□□□□□ -1.15
LRS4YDR439W TY1A-PR2P0CX60 440 aa7.87□□□□□ -1.15
LRS4YDR439W TY1A-DR5P0CX65 440 aa7.87□□□□□ -1.15
LRS4YDR439W TY1A-ER2P0CX66 440 aa7.87□□□□□ -1.15
LRS4YDR439W TY1A-GR3P0CX67 440 aa7.87□□□□□ -1.15
LRS4YDR439W TY1A-LR1P0CX68 440 aa7.87□□□□□ -1.15
LRS4YDR439W TY1A-MR2P0CX69 440 aa7.87□□□□□ -1.15
LRS4YDR439W SEC2P17065 759 aa7.87□□□□□ -1.15
LRS4YDR439W RGR1P19263 1082 aa7.87□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms