RNA–Protein interactions for RNA: YDR379C-A

SDH6, Transcript of Mitochondrial protein involved in assembly of succinate dehydrogenase, yeastyeast

Gene SDH6, Length 240 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH6YDR379C-A RGA1P39083 1007 aa6.97□□□□□ -1.29
SDH6YDR379C-A DCW1P36091 449 aa6.95□□□□□ -1.3
SDH6YDR379C-A RTG3P38165 486 aa6.95□□□□□ -1.3
SDH6YDR379C-A YEL023CP39992 682 aa6.95□□□□□ -1.3
SDH6YDR379C-A ELP4Q02884 456 aaKnown RBP6.93□□□□□ -1.3
SDH6YDR379C-A YDR344CQ05510 147 aa6.93□□□□□ -1.3
SDH6YDR379C-A SRC1Q03707 834 aa6.86□□□□□ -1.31
SDH6YDR379C-A PML39Q03760 334 aa6.85□□□□□ -1.31
SDH6YDR379C-A ARP8Q12386 881 aaKnown RBP RIP-Chip data6.8□□□□□ -1.32not detected
SDH6YDR379C-A CST9Q06032 482 aa6.79□□□□□ -1.32
SDH6YDR379C-A ARH1P48360 493 aa6.77□□□□□ -1.33
SDH6YDR379C-A RCR1P38212 213 aa6.75□□□□□ -1.33
SDH6YDR379C-A SPT23P35210 1082 aa6.72□□□□□ -1.33
SDH6YDR379C-A SSP1P38871 571 aa6.69□□□□□ -1.34
SDH6YDR379C-A GRE2Q12068 342 aaKnown RBP6.69□□□□□ -1.34
SDH6YDR379C-A MID1P41821 548 aa6.68□□□□□ -1.34
SDH6YDR379C-A MGA2P40578 1113 aa6.67□□□□□ -1.34
SDH6YDR379C-A PEX29Q03370 554 aa6.66□□□□□ -1.34
SDH6YDR379C-A HAP5Q02516 242 aa6.61□□□□□ -1.35
SDH6YDR379C-A PTC2P39966 464 aaKnown RBP6.59□□□□□ -1.35
SDH6YDR379C-A RAS1P01119 309 aa6.58□□□□□ -1.36
SDH6YDR379C-A ATH1P48016 1211 aa6.58□□□□□ -1.36
SDH6YDR379C-A YML082WQ04533 649 aaKnown RBP6.58□□□□□ -1.36
SDH6YDR379C-A BNI4P53858 892 aa6.57□□□□□ -1.36
SDH6YDR379C-A GUT1P32190 709 aa6.55□□□□□ -1.36
SDH6YDR379C-A NST1P53935 1240 aa6.52□□□□□ -1.37
SDH6YDR379C-A MIF2P35201 549 aa6.51□□□□□ -1.37
SDH6YDR379C-A TFA1P36100 482 aa6.51□□□□□ -1.37
SDH6YDR379C-A TRK1P12685 1235 aa6.49□□□□□ -1.37
SDH6YDR379C-A MPH3P0CE00 602 aa6.48□□□□□ -1.37
SDH6YDR379C-A PTC3P34221 468 aaKnown RBP6.48□□□□□ -1.37
SDH6YDR379C-A AI4P03878 556 aa6.47□□□□□ -1.37
SDH6YDR379C-A YPL062WQ02781 134 aa6.46□□□□□ -1.38
SDH6YDR379C-A SOL3P38858 249 aa6.45□□□□□ -1.38
SDH6YDR379C-A EDS1P38073 919 aa6.43□□□□□ -1.38
SDH6YDR379C-A MPC54Q08550 464 aa6.43□□□□□ -1.38
SDH6YDR379C-A AMS1P22855 1083 aa6.41□□□□□ -1.38
SDH6YDR379C-A ILV3P39522 585 aaKnown RBP6.41□□□□□ -1.38
SDH6YDR379C-A NMA111P53920 997 aa6.41□□□□□ -1.38
SDH6YDR379C-A YPR015CQ12531 247 aa6.37□□□□□ -1.39
SDH6YDR379C-A MAK11P20484 414 aaKnown RBP6.36□□□□□ -1.39
SDH6YDR379C-A GYP1Q08484 637 aa6.35□□□□□ -1.39
SDH6YDR379C-A DPL1Q05567 589 aa6.31□□□□□ -1.4
SDH6YDR379C-A RAM1P22007 431 aa6.3□□□□□ -1.4
SDH6YDR379C-A COQ8P27697 501 aa6.28□□□□□ -1.4
SDH6YDR379C-A SLI15P38283 698 aa6.28□□□□□ -1.4
SDH6YDR379C-A GBP2P25555 427 aaKnown RBP RIP-Chip data6.26□□□□□ -1.41not detected
SDH6YDR379C-A YGR273CP53329 174 aa6.26□□□□□ -1.41
SDH6YDR379C-A SDH2P21801 266 aa6.25□□□□□ -1.41
SDH6YDR379C-A GAR1P28007 205 aaKnown RBP6.25□□□□□ -1.41
SDH6YDR379C-A YEL077CQ3E7X8 1277 aa6.24□□□□□ -1.41
SDH6YDR379C-A RAM2P29703 316 aa6.23□□□□□ -1.41
SDH6YDR379C-A SAS4Q04003 481 aa6.23□□□□□ -1.41
SDH6YDR379C-A ISU2Q12056 156 aa6.23□□□□□ -1.41
SDH6YDR379C-A BRE2P43132 505 aa6.19□□□□□ -1.42
SDH6YDR379C-A GCR2Q01722 534 aa6.16□□□□□ -1.42
SDH6YDR379C-A PDR1P12383 1068 aa6.15□□□□□ -1.42
SDH6YDR379C-A MRF1P30775 413 aaPredicted RBP6.14□□□□□ -1.43
SDH6YDR379C-A CDC73Q06697 393 aa6.11□□□□□ -1.43
SDH6YDR379C-A AIR1P40507 360 aaKnown RBP6.08□□□□□ -1.44
SDH6YDR379C-A NOP53Q12080 455 aaKnown RBP6.08□□□□□ -1.44
SDH6YDR379C-A KEX1P09620 729 aa6.05□□□□□ -1.44
SDH6YDR379C-A ERG12P07277 443 aa6.03□□□□□ -1.44
SDH6YDR379C-A CLA4P48562 842 aa6.03□□□□□ -1.44
SDH6YDR379C-A PRT1P06103 763 aaKnown RBP6□□□□□ -1.45
SDH6YDR379C-A MET22P32179 357 aa6□□□□□ -1.45
SDH6YDR379C-A BUD20Q08004 166 aaPredicted RBP6□□□□□ -1.45
SDH6YDR379C-A CST6P40535 587 aa5.97□□□□□ -1.45
SDH6YDR379C-A ENV9Q08651 330 aa5.96□□□□□ -1.46
SDH6YDR379C-A RPP1BP10622 106 aaKnown RBP5.93□□□□□ -1.46
SDH6YDR379C-A CDC4P07834 779 aa5.91□□□□□ -1.46
SDH6YDR379C-A YDR444WQ04093 687 aa5.91□□□□□ -1.46
SDH6YDR379C-A LAM6Q08001 693 aa5.91□□□□□ -1.46
SDH6YDR379C-A STR2P47164 639 aa5.89□□□□□ -1.47
SDH6YDR379C-A FRK1Q03002 865 aaPredicted RBP5.89□□□□□ -1.47
SDH6YDR379C-A YLR326WQ06170 240 aaKnown RBP5.89□□□□□ -1.47
SDH6YDR379C-A YRR1Q12172 810 aa5.89□□□□□ -1.47
SDH6YDR379C-A ISM1P48526 1002 aa5.88□□□□□ -1.47
SDH6YDR379C-A PCS60P38137 543 aaKnown RBP RIP-Chip data5.87□□□□□ -1.47 RIP-Chip
SDH6YDR379C-A VHR2P40041 505 aa5.87□□□□□ -1.47
SDH6YDR379C-A UBP14P38237 781 aaKnown RBP5.86□□□□□ -1.47
SDH6YDR379C-A MTC5Q03897 1148 aa5.86□□□□□ -1.47
SDH6YDR379C-A SPT16P32558 1035 aaKnown RBP5.85□□□□□ -1.47
SDH6YDR379C-A RAD54P32863 898 aa5.85□□□□□ -1.47
SDH6YDR379C-A PEX21P50091 288 aa5.85□□□□□ -1.47
SDH6YDR379C-A YDL176WQ12027 708 aa5.85□□□□□ -1.47
SDH6YDR379C-A NUD1P32336 851 aa5.82□□□□□ -1.48
SDH6YDR379C-A LCB5Q06147 687 aaKnown RBP5.82□□□□□ -1.48
SDH6YDR379C-A NPL4P33755 580 aa5.81□□□□□ -1.48
SDH6YDR379C-A BDP1P46678 594 aa5.81□□□□□ -1.48
SDH6YDR379C-A GCD11P32481 527 aaKnown RBP5.8□□□□□ -1.48
SDH6YDR379C-A HED1Q03937 162 aa5.79□□□□□ -1.48
SDH6YDR379C-A TUM1Q08686 304 aaKnown RBP5.76□□□□□ -1.49
SDH6YDR379C-A TY1A-DR4O74302 440 aa5.75□□□□□ -1.49
SDH6YDR379C-A TY1A-HP0C2I4 478 aaKnown RBP5.75□□□□□ -1.49
SDH6YDR379C-A TY1A-AP0CX57 440 aa5.75□□□□□ -1.49
SDH6YDR379C-A TY1A-PR1P0CX58 440 aa5.75□□□□□ -1.49
SDH6YDR379C-A TY1A-ORP0CX59 440 aa5.75□□□□□ -1.49
SDH6YDR379C-A TY1A-PR2P0CX60 440 aa5.75□□□□□ -1.49
SDH6YDR379C-A TY1A-DR5P0CX65 440 aa5.75□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms