RNA–Protein interactions for RNA: YDR280W

RRP45, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP45, Length 918 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP45YDR280W TOP2P06786 1428 aaKnown RBP9.29□□□□□ -0.92
RRP45YDR280W NUP159P40477 1460 aa9.27□□□□□ -0.93
RRP45YDR280W YOR093CQ12275 1648 aa9.23□□□□□ -0.93
RRP45YDR280W NTE1Q04958 1679 aa9.2□□□□□ -0.94
RRP45YDR280W TY1B-JR2P47100 1755 aaKnown RBP9.19□□□□□ -0.94
RRP45YDR280W TY1B-ER2Q03619 1755 aa9.19□□□□□ -0.94
RRP45YDR280W TY1B-MR1Q04214 1755 aa9.19□□□□□ -0.94
RRP45YDR280W TY1B-MR2Q04670 1755 aaKnown RBP9.19□□□□□ -0.94
RRP45YDR280W TY1B-LR1Q12088 1755 aaKnown RBP9.19□□□□□ -0.94
RRP45YDR280W TY1B-NL1Q12112 1755 aa9.19□□□□□ -0.94
RRP45YDR280W TY1B-GR1Q12141 1755 aa9.19□□□□□ -0.94
RRP45YDR280W TY1B-BLQ12490 1755 aa9.19□□□□□ -0.94
RRP45YDR280W RPO21P04050 1733 aaKnown RBP9.14□□□□□ -0.95
RRP45YDR280W TSR3Q12094 313 aaKnown RBP9.13□□□□□ -0.95
RRP45YDR280W NUP170P38181 1502 aa9.12□□□□□ -0.95
RRP45YDR280W SPP41P38904 1435 aa9.1□□□□□ -0.95
RRP45YDR280W SPO14P36126 1683 aa9.07□□□□□ -0.96
RRP45YDR280W TSC11P40061 1430 aa9.05□□□□□ -0.96
RRP45YDR280W SMC4Q12267 1418 aa9.05□□□□□ -0.96
RRP45YDR280W VTH1P40438 1549 aa9.05□□□□□ -0.96
RRP45YDR280W VTH2P40890 1549 aa9.05□□□□□ -0.96
RRP45YDR280W DOP1Q03921 1698 aa9.03□□□□□ -0.96
RRP45YDR280W POL1P13382 1468 aa9.02□□□□□ -0.97
RRP45YDR280W SNT2P53127 1403 aa9□□□□□ -0.97
RRP45YDR280W YOR1P53049 1477 aa9□□□□□ -0.97
RRP45YDR280W ULS1Q08562 1619 aa8.98□□□□□ -0.97
RRP45YDR280W DIP2Q12220 943 aaPredicted RBP8.96□□□□□ -0.98
RRP45YDR280W MYO4P32492 1471 aa8.95□□□□□ -0.98
RRP45YDR280W TRM3Q07527 1436 aa8.94□□□□□ -0.98
RRP45YDR280W MRPL32P25348 183 aa8.91□□□□□ -0.98
RRP45YDR280W MET10P39692 1035 aa8.89□□□□□ -0.99
RRP45YDR280W STU1P38198 1513 aa8.89□□□□□ -0.99
RRP45YDR280W SNQ2P32568 1501 aaKnown RBP8.88□□□□□ -0.99
RRP45YDR280W PDR12Q02785 1511 aa8.87□□□□□ -0.99
RRP45YDR280W PDR10P51533 1564 aa8.86□□□□□ -0.99
RRP45YDR280W DNF3Q12674 1656 aa8.85□□□□□ -0.99
RRP45YDR280W IQG1Q12280 1495 aa8.83□□□□□ -1
RRP45YDR280W GDB1Q06625 1536 aa8.83□□□□□ -1
RRP45YDR280W PDR15Q04182 1529 aaKnown RBP8.81□□□□□ -1
RRP45YDR280W ARO1P08566 1588 aaKnown RBP8.8□□□□□ -1
RRP45YDR280W BUD3P25558 1636 aa8.77□□□□□ -1.01
RRP45YDR280W CHC1P22137 1653 aaKnown RBP8.76□□□□□ -1.01
RRP45YDR280W YGL015CP33199 130 aa8.74□□□□□ -1.01
RRP45YDR280W TFA1P36100 482 aa8.73□□□□□ -1.01
RRP45YDR280W STH1P32597 1359 aa8.71□□□□□ -1.02
RRP45YDR280W YTA7P40340 1379 aa8.71□□□□□ -1.02
RRP45YDR280W MLP2P40457 1679 aa8.69□□□□□ -1.02
RRP45YDR280W NUP157P40064 1391 aaKnown RBP8.69□□□□□ -1.02
RRP45YDR280W RTT106P40161 455 aa8.66□□□□□ -1.02
RRP45YDR280W USO1P25386 1790 aa8.65□□□□□ -1.02
RRP45YDR280W YAP3P38749 330 aa8.62□□□□□ -1.03
RRP45YDR280W TY3B-GQ99315 1547 aa8.61□□□□□ -1.03
RRP45YDR280W SEC7P11075 2009 aaKnown RBP8.61□□□□□ -1.03
RRP45YDR280W MAK10Q02197 733 aa8.6□□□□□ -1.03
RRP45YDR280W REB1P21538 810 aa8.58□□□□□ -1.04
RRP45YDR280W BNR1P40450 1375 aa8.58□□□□□ -1.04
RRP45YDR280W RPL17AP05740 184 aaKnown RBP8.53□□□□□ -1.04
RRP45YDR280W RPL17BP46990 184 aaKnown RBP8.53□□□□□ -1.04
RRP45YDR280W BFR2Q06631 534 aaKnown RBP8.53□□□□□ -1.04
RRP45YDR280W YSP2Q06681 1438 aa8.51□□□□□ -1.05
RRP45YDR280W GLN1P32288 370 aaKnown RBP8.5□□□□□ -1.05
RRP45YDR280W AVT3P36062 692 aa8.5□□□□□ -1.05
RRP45YDR280W TY1B-NL2Q99337 1749 aaKnown RBP8.46□□□□□ -1.06
RRP45YDR280W YMR196WQ04336 1088 aa8.44□□□□□ -1.06
RRP45YDR280W THI12P42883 340 aa8.43□□□□□ -1.06
RRP45YDR280W THI5P43534 340 aa8.43□□□□□ -1.06
RRP45YDR280W THI11P47183 340 aa8.43□□□□□ -1.06
RRP45YDR280W THI13Q07748 340 aa8.43□□□□□ -1.06
RRP45YDR280W URN1Q06525 465 aaKnown RBP8.39□□□□□ -1.07
RRP45YDR280W YAH1Q12184 172 aaKnown RBP8.39□□□□□ -1.07
RRP45YDR280W HAP1P0CE41 1502 aa8.39□□□□□ -1.07
RRP45YDR280W NUP188P52593 1655 aaKnown RBP8.37□□□□□ -1.07
RRP45YDR280W YBT1P32386 1661 aa8.34□□□□□ -1.07
RRP45YDR280W IML1P47170 1584 aa8.34□□□□□ -1.07
RRP45YDR280W CAT8P39113 1433 aa8.33□□□□□ -1.08
RRP45YDR280W YIL055CP40523 627 aaKnown RBP8.33□□□□□ -1.08
RRP45YDR280W UBP10P53874 792 aaPredicted RBP8.26□□□□□ -1.09
RRP45YDR280W VMR1P38735 1592 aa8.24□□□□□ -1.09
RRP45YDR280W CDC27P38042 758 aa8.24□□□□□ -1.09
RRP45YDR280W APP1P53933 587 aa8.24□□□□□ -1.09
RRP45YDR280W IPL1P38991 367 aa8.22□□□□□ -1.09
RRP45YDR280W CKB1P43639 278 aa8.21□□□□□ -1.1
RRP45YDR280W YMR074CQ04773 145 aa8.21□□□□□ -1.1
RRP45YDR280W BUD31P25337 157 aaPredicted RBP8.17□□□□□ -1.1
RRP45YDR280W TAF7Q05021 590 aa8.17□□□□□ -1.1
RRP45YDR280W PTP3P40048 928 aa8.16□□□□□ -1.1
RRP45YDR280W BCK1Q01389 1478 aa8.16□□□□□ -1.1
RRP45YDR280W GEA1P47102 1408 aaPredicted RBP8.15□□□□□ -1.1
RRP45YDR280W IFH1P39520 1085 aa8.15□□□□□ -1.1
RRP45YDR280W SPT21P35209 758 aa8.13□□□□□ -1.11
RRP45YDR280W YKR023WP36119 530 aaKnown RBP8.13□□□□□ -1.11
RRP45YDR280W TYS1P36421 394 aaKnown RBP8.12□□□□□ -1.11
RRP45YDR280W SAS10Q12136 610 aaPredicted RBP8.11□□□□□ -1.11
RRP45YDR280W PDR11P40550 1411 aa8.08□□□□□ -1.12
RRP45YDR280W MAP2P38174 421 aaKnown RBP8.07□□□□□ -1.12
RRP45YDR280W SSA1P10591 642 aaKnown RBP8.04□□□□□ -1.12
RRP45YDR280W PDR5P33302 1511 aaKnown RBP8.02□□□□□ -1.13
RRP45YDR280W SRB8P25648 1427 aa8.02□□□□□ -1.13
RRP45YDR280W RRD1P40454 393 aaKnown RBP8□□□□□ -1.13
RRP45YDR280W TFC8Q12308 588 aa8□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms