RNA–Protein interactions for RNA: YDR261C-D

YDR261C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YDR261C-D, Length 4,815 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR261C-DYDR261C-D SYH1Q02875 849 aaKnown RBP5.37□□□□□ -1.55
YDR261C-DYDR261C-D MIC60P36112 540 aa5.37□□□□□ -1.55
YDR261C-DYDR261C-D FUN30P31380 1131 aa5.37□□□□□ -1.55
YDR261C-DYDR261C-D NUG1P40010 520 aaKnown RBP5.37□□□□□ -1.55
YDR261C-DYDR261C-D PRP3Q03338 469 aaPredicted RBP5.37□□□□□ -1.55
YDR261C-DYDR261C-D SVF1Q05515 481 aa5.36□□□□□ -1.55
YDR261C-DYDR261C-D SEC27P41811 889 aaKnown RBP5.36□□□□□ -1.55
YDR261C-DYDR261C-D SMC3P47037 1230 aa5.35□□□□□ -1.55
YDR261C-DYDR261C-D RRN3P36070 627 aa5.35□□□□□ -1.55
YDR261C-DYDR261C-D DSN1P40568 576 aa5.35□□□□□ -1.55
YDR261C-DYDR261C-D PET111P08468 800 aa5.35□□□□□ -1.55
YDR261C-DYDR261C-D ZUO1P32527 433 aaKnown RBP5.35□□□□□ -1.55
YDR261C-DYDR261C-D YLR257WQ06146 321 aaKnown RBP5.35□□□□□ -1.55
YDR261C-DYDR261C-D GIN4Q12263 1142 aa5.34□□□□□ -1.55
YDR261C-DYDR261C-D CTR9P89105 1077 aa5.34□□□□□ -1.55
YDR261C-DYDR261C-D SKI3P17883 1432 aaKnown RBP5.34□□□□□ -1.55
YDR261C-DYDR261C-D RED1P14291 827 aa5.34□□□□□ -1.55
YDR261C-DYDR261C-D SEC3P33332 1336 aaKnown RBP5.34□□□□□ -1.56
YDR261C-DYDR261C-D RNT1Q02555 471 aa5.33□□□□□ -1.56
YDR261C-DYDR261C-D CEF1Q03654 590 aaPredicted RBP5.33□□□□□ -1.56
YDR261C-DYDR261C-D LSG1P53145 640 aaKnown RBP5.33□□□□□ -1.56
YDR261C-DYDR261C-D RTP1Q12751 981 aa5.33□□□□□ -1.56
YDR261C-DYDR261C-D YKR023WP36119 530 aaKnown RBP5.33□□□□□ -1.56
YDR261C-DYDR261C-D CWC22P53333 577 aaKnown RBP5.33□□□□□ -1.56
YDR261C-DYDR261C-D PIL1P53252 339 aaKnown RBP5.32□□□□□ -1.56
YDR261C-DYDR261C-D SPT8P38915 602 aa5.32□□□□□ -1.56
YDR261C-DYDR261C-D MAK16P10962 306 aaPredicted RBP5.32□□□□□ -1.56
YDR261C-DYDR261C-D TPM2P40414 161 aa5.32□□□□□ -1.56
YDR261C-DYDR261C-D MEI5P32489 222 aa5.31□□□□□ -1.56
YDR261C-DYDR261C-D IMH1Q06704 911 aaKnown RBP5.31□□□□□ -1.56
YDR261C-DYDR261C-D PET100P38958 111 aa5.31□□□□□ -1.56
YDR261C-DYDR261C-D INO80P53115 1489 aa5.3□□□□□ -1.56
YDR261C-DYDR261C-D TPM1P17536 199 aaKnown RBP5.3□□□□□ -1.56
YDR261C-DYDR261C-D CDC3P32457 520 aaKnown RBP5.3□□□□□ -1.56
YDR261C-DYDR261C-D SMY2P32909 740 aaKnown RBP5.3□□□□□ -1.56
YDR261C-DYDR261C-D BFR1P38934 470 aaKnown RBP RIP-Chip data5.3□□□□□ -1.56not detected
YDR261C-DYDR261C-D NOC2P39744 710 aaKnown RBP5.3□□□□□ -1.56
YDR261C-DYDR261C-D CLB1P24868 471 aa5.3□□□□□ -1.56
YDR261C-DYDR261C-D CAJ1P39101 391 aa5.3□□□□□ -1.56
YDR261C-DYDR261C-D OCA1P50946 238 aaPredicted RBP5.29□□□□□ -1.56
YDR261C-DYDR261C-D RPB2P08518 1224 aaKnown RBP5.29□□□□□ -1.56
YDR261C-DYDR261C-D KAR3P17119 729 aa5.29□□□□□ -1.56
YDR261C-DYDR261C-D RRP1P35178 278 aaPredicted RBP5.29□□□□□ -1.56
YDR261C-DYDR261C-D VPS30Q02948 557 aa5.29□□□□□ -1.56
YDR261C-DYDR261C-D CLF1Q12309 687 aaPredicted RBP5.29□□□□□ -1.56
YDR261C-DYDR261C-D TAF1P46677 1066 aa5.29□□□□□ -1.56
YDR261C-DYDR261C-D YGR130CP53278 816 aa5.29□□□□□ -1.56
YDR261C-DYDR261C-D NOP8Q08287 484 aaPredicted RBP5.28□□□□□ -1.56
YDR261C-DYDR261C-D RRP14P36080 434 aaKnown RBP5.28□□□□□ -1.56
YDR261C-DYDR261C-D TCD1P38756 429 aa5.28□□□□□ -1.56
YDR261C-DYDR261C-D PKC1P24583 1151 aa5.28□□□□□ -1.56
YDR261C-DYDR261C-D POL4P25615 582 aa5.28□□□□□ -1.56
YDR261C-DYDR261C-D NDC80P40460 691 aa5.28□□□□□ -1.56
YDR261C-DYDR261C-D PAF1P38351 445 aa5.27□□□□□ -1.57
YDR261C-DYDR261C-D KEL3Q08979 651 aaPredicted RBP5.27□□□□□ -1.57
YDR261C-DYDR261C-D YVC1Q12324 675 aa5.27□□□□□ -1.57
YDR261C-DYDR261C-D EXO84P38261 753 aa5.27□□□□□ -1.57
YDR261C-DYDR261C-D NOG1Q02892 647 aaKnown RBP5.27□□□□□ -1.57
YDR261C-DYDR261C-D NOP53Q12080 455 aaKnown RBP5.27□□□□□ -1.57
YDR261C-DYDR261C-D SMC2P38989 1170 aaKnown RBP5.26□□□□□ -1.57
YDR261C-DYDR261C-D TFG1P41895 735 aaPredicted RBP5.26□□□□□ -1.57
YDR261C-DYDR261C-D PDI1P17967 522 aaKnown RBP5.26□□□□□ -1.57
YDR261C-DYDR261C-D YNL247WP53852 767 aaKnown RBP5.26□□□□□ -1.57
YDR261C-DYDR261C-D TOM71P38825 639 aaKnown RBP5.26□□□□□ -1.57
YDR261C-DYDR261C-D MPP10P47083 593 aaKnown RBP5.26□□□□□ -1.57
YDR261C-DYDR261C-D HIF1Q12373 385 aa5.26□□□□□ -1.57
YDR261C-DYDR261C-D TY4A-HQ6Q5P6 413 aa5.26□□□□□ -1.57
YDR261C-DYDR261C-D YJU2P28320 278 aaPredicted RBP5.25□□□□□ -1.57
YDR261C-DYDR261C-D SLD2P34252 453 aa5.25□□□□□ -1.57
YDR261C-DYDR261C-D SLK19Q08581 821 aaKnown RBP5.25□□□□□ -1.57
YDR261C-DYDR261C-D YKL100CP34248 587 aa5.25□□□□□ -1.57
YDR261C-DYDR261C-D ETP1P38748 585 aaKnown RBP5.25□□□□□ -1.57
YDR261C-DYDR261C-D LCD1Q04377 747 aa5.25□□□□□ -1.57
YDR261C-DYDR261C-D SQT1P35184 431 aa5.24□□□□□ -1.57
YDR261C-DYDR261C-D CKB1P43639 278 aa5.24□□□□□ -1.57
YDR261C-DYDR261C-D RRP17Q04031 235 aaPredicted RBP5.24□□□□□ -1.57
YDR261C-DYDR261C-D PUF6Q04373 656 aaKnown RBP5.24□□□□□ -1.57
YDR261C-DYDR261C-D MED2Q12124 431 aa5.24□□□□□ -1.57
YDR261C-DYDR261C-D PEX5P35056 612 aa5.23□□□□□ -1.57
YDR261C-DYDR261C-D CCL1P37366 393 aa5.23□□□□□ -1.57
YDR261C-DYDR261C-D REI1P38344 393 aaPredicted RBP5.23□□□□□ -1.57
YDR261C-DYDR261C-D RCF1Q03713 159 aa5.23□□□□□ -1.57
YDR261C-DYDR261C-D TOM70P07213 617 aaKnown RBP5.23□□□□□ -1.57
YDR261C-DYDR261C-D RRP15Q06511 250 aaPredicted RBP5.23□□□□□ -1.57
YDR261C-DYDR261C-D CDC37P06101 506 aaKnown RBP5.23□□□□□ -1.57
YDR261C-DYDR261C-D SSO1P32867 290 aa5.23□□□□□ -1.57
YDR261C-DYDR261C-D YPR097WQ06839 1073 aa5.23□□□□□ -1.57
YDR261C-DYDR261C-D RAT1Q02792 1006 aaKnown RBP5.22□□□□□ -1.57
YDR261C-DYDR261C-D ECM16Q04217 1267 aaKnown RBP5.22□□□□□ -1.57
YDR261C-DYDR261C-D BUD27P43573 796 aaKnown RBP RIP-Chip data5.22□□□□□ -1.57not detected
YDR261C-DYDR261C-D ERB1Q04660 807 aaKnown RBP5.22□□□□□ -1.57
YDR261C-DYDR261C-D RAD2P07276 1031 aa5.22□□□□□ -1.57
YDR261C-DYDR261C-D SRB7P47822 140 aa5.22□□□□□ -1.57
YDR261C-DYDR261C-D TY4B-PA0A0B7P3V8 1104 aa5.22□□□□□ -1.57
YDR261C-DYDR261C-D HCA4P20448 770 aaKnown RBP5.21□□□□□ -1.57
YDR261C-DYDR261C-D SSO2P39926 295 aa5.21□□□□□ -1.57
YDR261C-DYDR261C-D GCN20P43535 752 aaKnown RBP5.21□□□□□ -1.57
YDR261C-DYDR261C-D MGR3Q04472 501 aa5.21□□□□□ -1.57
YDR261C-DYDR261C-D SMI1P32566 505 aa5.21□□□□□ -1.58
YDR261C-DYDR261C-D VMS1Q04311 632 aaKnown RBP5.21□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 62.5 ms