RNA–Protein interactions for RNA: YDR178W

SDH4, Transcript of Membrane anchor subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SDH4, Length 546 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH4YDR178W YRF1-5P0CX21 1796 aa9.9□□□□□ -0.82
SDH4YDR178W YRF1-8P0CX22 1796 aa9.9□□□□□ -0.82
SDH4YDR178W NUP159P40477 1460 aa9.9□□□□□ -0.83
SDH4YDR178W SNT2P53127 1403 aa9.89□□□□□ -0.83
SDH4YDR178W ULS1Q08562 1619 aa9.86□□□□□ -0.83
SDH4YDR178W MLP2P40457 1679 aa9.83□□□□□ -0.84
SDH4YDR178W STH1P32597 1359 aa9.82□□□□□ -0.84
SDH4YDR178W PDR15Q04182 1529 aaKnown RBP9.81□□□□□ -0.84
SDH4YDR178W LTE1P07866 1435 aa9.81□□□□□ -0.84
SDH4YDR178W VPS15P22219 1454 aa9.79□□□□□ -0.84
SDH4YDR178W SAS10Q12136 610 aaPredicted RBP9.78□□□□□ -0.84
SDH4YDR178W BNI1P41832 1953 aa9.74□□□□□ -0.85
SDH4YDR178W GEA2P39993 1459 aaKnown RBP9.73□□□□□ -0.85
SDH4YDR178W IRC20Q06554 1556 aa9.73□□□□□ -0.85
SDH4YDR178W SPO14P36126 1683 aa9.73□□□□□ -0.85
SDH4YDR178W PDR12Q02785 1511 aa9.72□□□□□ -0.85
SDH4YDR178W GDB1Q06625 1536 aa9.67□□□□□ -0.86
SDH4YDR178W TY3B-GQ99315 1547 aa9.67□□□□□ -0.86
SDH4YDR178W GEA1P47102 1408 aaPredicted RBP9.65□□□□□ -0.86
SDH4YDR178W TAF7Q05021 590 aa9.65□□□□□ -0.86
SDH4YDR178W MET10P39692 1035 aa9.64□□□□□ -0.87
SDH4YDR178W RTT106P40161 455 aa9.64□□□□□ -0.87
SDH4YDR178W ITT1Q04638 464 aa9.62□□□□□ -0.87
SDH4YDR178W YBT1P32386 1661 aa9.61□□□□□ -0.87
SDH4YDR178W IFH1P39520 1085 aa9.61□□□□□ -0.87
SDH4YDR178W PDR10P51533 1564 aa9.61□□□□□ -0.87
SDH4YDR178W NUP170P38181 1502 aa9.6□□□□□ -0.87
SDH4YDR178W DRS2P39524 1355 aa9.6□□□□□ -0.87
SDH4YDR178W NUP157P40064 1391 aaKnown RBP9.6□□□□□ -0.87
SDH4YDR178W IQG1Q12280 1495 aa9.56□□□□□ -0.88
SDH4YDR178W CAT8P39113 1433 aa9.55□□□□□ -0.88
SDH4YDR178W ARO1P08566 1588 aaKnown RBP9.53□□□□□ -0.88
SDH4YDR178W MMS1Q06211 1407 aa9.51□□□□□ -0.89
SDH4YDR178W DOP1Q03921 1698 aa9.5□□□□□ -0.89
SDH4YDR178W BUD3P25558 1636 aa9.48□□□□□ -0.89
SDH4YDR178W TRM3Q07527 1436 aa9.47□□□□□ -0.89
SDH4YDR178W YSP2Q06681 1438 aa9.45□□□□□ -0.9
SDH4YDR178W DNF2Q12675 1612 aa9.44□□□□□ -0.9
SDH4YDR178W CHC1P22137 1653 aaKnown RBP9.43□□□□□ -0.9
SDH4YDR178W SEC7P11075 2009 aaKnown RBP9.39□□□□□ -0.91
SDH4YDR178W IKI3Q06706 1349 aaKnown RBP9.39□□□□□ -0.91
SDH4YDR178W CKB1P43639 278 aa9.37□□□□□ -0.91
SDH4YDR178W SRB8P25648 1427 aa9.36□□□□□ -0.91
SDH4YDR178W SSM4P40318 1319 aa9.33□□□□□ -0.92
SDH4YDR178W BNR1P40450 1375 aa9.32□□□□□ -0.92
SDH4YDR178W YOR093CQ12275 1648 aa9.3□□□□□ -0.92
SDH4YDR178W ABP1P15891 592 aaKnown RBP9.27□□□□□ -0.93
SDH4YDR178W VMR1P38735 1592 aa9.2□□□□□ -0.94
SDH4YDR178W MIF2P35201 549 aa9.19□□□□□ -0.94
SDH4YDR178W BUD21Q08492 214 aaPredicted RBP9.19□□□□□ -0.94
SDH4YDR178W DNF3Q12674 1656 aa9.18□□□□□ -0.94
SDH4YDR178W NUP188P52593 1655 aaKnown RBP9.17□□□□□ -0.94
SDH4YDR178W GCN2P15442 1659 aa9.14□□□□□ -0.95
SDH4YDR178W PDR5P33302 1511 aaKnown RBP9.13□□□□□ -0.95
SDH4YDR178W YAP3P38749 330 aa9.12□□□□□ -0.95
SDH4YDR178W IML1P47170 1584 aa9.1□□□□□ -0.95
SDH4YDR178W PDR11P40550 1411 aa9.09□□□□□ -0.95
SDH4YDR178W IPL1P38991 367 aa9.06□□□□□ -0.96
SDH4YDR178W HAP1P0CE41 1502 aa9.05□□□□□ -0.96
SDH4YDR178W TYS1P36421 394 aaKnown RBP9.05□□□□□ -0.96
SDH4YDR178W URN1Q06525 465 aaKnown RBP9.03□□□□□ -0.96
SDH4YDR178W MAK10Q02197 733 aa8.98□□□□□ -0.97
SDH4YDR178W FAP1P53971 965 aa8.96□□□□□ -0.98
SDH4YDR178W RAV1P47104 1357 aa8.96□□□□□ -0.98
SDH4YDR178W USO1P25386 1790 aa8.94□□□□□ -0.98
SDH4YDR178W YFR006WP43590 535 aa8.94□□□□□ -0.98
SDH4YDR178W NUP192P47054 1683 aa8.93□□□□□ -0.98
SDH4YDR178W RTC1Q08281 1341 aa8.89□□□□□ -0.99
SDH4YDR178W BFR2Q06631 534 aaKnown RBP8.87□□□□□ -0.99
SDH4YDR178W TY1B-NL2Q99337 1749 aaKnown RBP8.86□□□□□ -0.99
SDH4YDR178W PAF1P38351 445 aa8.86□□□□□ -0.99
SDH4YDR178W BCK1Q01389 1478 aa8.85□□□□□ -0.99
SDH4YDR178W NOP7P53261 605 aaKnown RBP8.83□□□□□ -1
SDH4YDR178W KRE5P22023 1365 aa8.83□□□□□ -1
SDH4YDR178W CFT1Q06632 1357 aaKnown RBP8.82□□□□□ -1
SDH4YDR178W RAD9P14737 1309 aa8.8□□□□□ -1
SDH4YDR178W THI12P42883 340 aa8.76□□□□□ -1.01
SDH4YDR178W THI5P43534 340 aa8.76□□□□□ -1.01
SDH4YDR178W ALD4P46367 519 aaKnown RBP8.76□□□□□ -1.01
SDH4YDR178W THI11P47183 340 aa8.76□□□□□ -1.01
SDH4YDR178W CAB1Q04430 367 aa8.76□□□□□ -1.01
SDH4YDR178W THI13Q07748 340 aa8.76□□□□□ -1.01
SDH4YDR178W YMR196WQ04336 1088 aa8.75□□□□□ -1.01
SDH4YDR178W RIA1P53893 1110 aa8.74□□□□□ -1.01
SDH4YDR178W TY3B-IQ7LHG5 1498 aaKnown RBP8.74□□□□□ -1.01
SDH4YDR178W TAF5P38129 798 aa8.72□□□□□ -1.01
SDH4YDR178W MRX12P47084 519 aa8.72□□□□□ -1.01
SDH4YDR178W YNR029CP53729 429 aaKnown RBP8.71□□□□□ -1.02
SDH4YDR178W ESL2P36168 1195 aa8.7□□□□□ -1.02
SDH4YDR178W TAF8Q03750 510 aa8.67□□□□□ -1.02
SDH4YDR178W YLR419WQ06698 1435 aaKnown RBP8.65□□□□□ -1.02
SDH4YDR178W KIP3P53086 805 aaKnown RBP8.62□□□□□ -1.03
SDH4YDR178W SPE2P21182 396 aa8.61□□□□□ -1.03
SDH4YDR178W PPH3P32345 308 aa8.59□□□□□ -1.03
SDH4YDR178W RCM1P53972 490 aa8.59□□□□□ -1.03
SDH4YDR178W ORC1P54784 914 aaPredicted RBP8.59□□□□□ -1.03
SDH4YDR178W CPS1P27614 576 aa8.58□□□□□ -1.04
SDH4YDR178W PTP3P40048 928 aa8.57□□□□□ -1.04
SDH4YDR178W NAP1P25293 417 aaKnown RBP8.56□□□□□ -1.04
SDH4YDR178W PSK1P31374 1356 aa8.55□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 81.2 ms