RNA–Protein interactions for RNA: YDL204W

RTN2, Transcript of Reticulon protein, yeastyeast

Gene RTN2, Length 1,182 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTN2YDL204W TY1B-BLQ12490 1755 aa14.55□□□□□ -0.08
RTN2YDL204W IFH1P39520 1085 aa14.54□□□□□ -0.08
RTN2YDL204W NUP170P38181 1502 aa14.53□□□□□ -0.08
RTN2YDL204W NTE1Q04958 1679 aa14.51□□□□□ -0.09
RTN2YDL204W SNT2P53127 1403 aa14.47□□□□□ -0.09
RTN2YDL204W RPA190P10964 1664 aaKnown RBP14.46□□□□□ -0.1
RTN2YDL204W RPO21P04050 1733 aaKnown RBP14.44□□□□□ -0.1
RTN2YDL204W GEA2P39993 1459 aaKnown RBP14.41□□□□□ -0.1
RTN2YDL204W TY3B-GQ99315 1547 aa14.39□□□□□ -0.11
RTN2YDL204W DNF1P32660 1571 aa14.39□□□□□ -0.11
RTN2YDL204W MTC1P47018 478 aaKnown RBP14.38□□□□□ -0.11
RTN2YDL204W YBT1P32386 1661 aa14.38□□□□□ -0.11
RTN2YDL204W SSM4P40318 1319 aa14.37□□□□□ -0.11
RTN2YDL204W IRC20Q06554 1556 aa14.35□□□□□ -0.11
RTN2YDL204W RTT106P40161 455 aa14.35□□□□□ -0.11
RTN2YDL204W CAT8P39113 1433 aa14.31□□□□□ -0.12
RTN2YDL204W NUP159P40477 1460 aa14.28□□□□□ -0.12
RTN2YDL204W VPS15P22219 1454 aa14.26□□□□□ -0.13
RTN2YDL204W PDR12Q02785 1511 aa14.16□□□□□ -0.14
RTN2YDL204W ARO1P08566 1588 aaKnown RBP14.16□□□□□ -0.14
RTN2YDL204W PDR10P51533 1564 aa14.14□□□□□ -0.15
RTN2YDL204W GDB1Q06625 1536 aa14.14□□□□□ -0.15
RTN2YDL204W SPO14P36126 1683 aa14.13□□□□□ -0.15
RTN2YDL204W SRB8P25648 1427 aa14.12□□□□□ -0.15
RTN2YDL204W MET5P47169 1442 aa14.11□□□□□ -0.15
RTN2YDL204W YRF1-1P0CX20 1796 aa14.11□□□□□ -0.15
RTN2YDL204W YRF1-5P0CX21 1796 aa14.11□□□□□ -0.15
RTN2YDL204W YRF1-8P0CX22 1796 aa14.11□□□□□ -0.15
RTN2YDL204W MET10P39692 1035 aa14.07□□□□□ -0.16
RTN2YDL204W NUP157P40064 1391 aaKnown RBP14.07□□□□□ -0.16
RTN2YDL204W GCN2P15442 1659 aa14.03□□□□□ -0.16
RTN2YDL204W CKB1P43639 278 aa14.02□□□□□ -0.17
RTN2YDL204W BUD3P25558 1636 aa13.96□□□□□ -0.17
RTN2YDL204W MMS1Q06211 1407 aa13.96□□□□□ -0.18
RTN2YDL204W IQG1Q12280 1495 aa13.93□□□□□ -0.18
RTN2YDL204W BUD21Q08492 214 aaPredicted RBP13.89□□□□□ -0.19
RTN2YDL204W YSP2Q06681 1438 aa13.88□□□□□ -0.19
RTN2YDL204W POL5P39985 1022 aaKnown RBP13.86□□□□□ -0.19
RTN2YDL204W NOP7P53261 605 aaKnown RBP13.81□□□□□ -0.2
RTN2YDL204W YOR093CQ12275 1648 aa13.8□□□□□ -0.2
RTN2YDL204W LTE1P07866 1435 aa13.77□□□□□ -0.21
RTN2YDL204W CHC1P22137 1653 aaKnown RBP13.77□□□□□ -0.21
RTN2YDL204W PDR5P33302 1511 aaKnown RBP13.77□□□□□ -0.21
RTN2YDL204W BNR1P40450 1375 aa13.77□□□□□ -0.21
RTN2YDL204W DOP1Q03921 1698 aa13.76□□□□□ -0.21
RTN2YDL204W SEC7P11075 2009 aaKnown RBP13.76□□□□□ -0.21
RTN2YDL204W TRM3Q07527 1436 aa13.74□□□□□ -0.21
RTN2YDL204W PAF1P38351 445 aa13.73□□□□□ -0.21
RTN2YDL204W DRS2P39524 1355 aa13.66□□□□□ -0.22
RTN2YDL204W SEC3P33332 1336 aaKnown RBP13.64□□□□□ -0.23
RTN2YDL204W BFR2Q06631 534 aaKnown RBP13.61□□□□□ -0.23
RTN2YDL204W NUP188P52593 1655 aaKnown RBP13.59□□□□□ -0.23
RTN2YDL204W VMR1P38735 1592 aa13.58□□□□□ -0.23
RTN2YDL204W IML1P47170 1584 aa13.56□□□□□ -0.24
RTN2YDL204W NSR1P27476 414 aaKnown RBP RIP-Chip data13.55□□□□□ -0.24not detected
RTN2YDL204W RAV1P47104 1357 aa13.55□□□□□ -0.24
RTN2YDL204W DNF2Q12675 1612 aa13.54□□□□□ -0.24
RTN2YDL204W ENP1P38333 483 aaKnown RBP13.53□□□□□ -0.24
RTN2YDL204W MHP1P43638 1398 aa13.51□□□□□ -0.25
RTN2YDL204W SPT7P35177 1332 aa13.48□□□□□ -0.25
RTN2YDL204W RTC1Q08281 1341 aa13.48□□□□□ -0.25
RTN2YDL204W TY3B-IQ7LHG5 1498 aaKnown RBP13.47□□□□□ -0.25
RTN2YDL204W PDR11P40550 1411 aa13.46□□□□□ -0.26
RTN2YDL204W BNI1P41832 1953 aa13.4□□□□□ -0.26
RTN2YDL204W ORC1P54784 914 aaPredicted RBP13.39□□□□□ -0.27
RTN2YDL204W TAF5P38129 798 aa13.37□□□□□ -0.27
RTN2YDL204W ESL2P36168 1195 aa13.36□□□□□ -0.27
RTN2YDL204W URN1Q06525 465 aaKnown RBP13.36□□□□□ -0.27
RTN2YDL204W NUP192P47054 1683 aa13.36□□□□□ -0.27
RTN2YDL204W SCT1P32784 759 aa13.35□□□□□ -0.27
RTN2YDL204W ITT1Q04638 464 aa13.35□□□□□ -0.27
RTN2YDL204W YLR419WQ06698 1435 aaKnown RBP13.35□□□□□ -0.27
RTN2YDL204W NOP2P40991 618 aaKnown RBP13.31□□□□□ -0.28
RTN2YDL204W KIP3P53086 805 aaKnown RBP13.29□□□□□ -0.28
RTN2YDL204W LEU3P08638 886 aa13.28□□□□□ -0.28
RTN2YDL204W IPL1P38991 367 aa13.26□□□□□ -0.29
RTN2YDL204W PSD2P53037 1138 aaKnown RBP13.26□□□□□ -0.29
RTN2YDL204W PDS5Q04264 1277 aa13.25□□□□□ -0.29
RTN2YDL204W TYS1P36421 394 aaKnown RBP13.22□□□□□ -0.29
RTN2YDL204W HAP1P0CE41 1502 aa13.19□□□□□ -0.3
RTN2YDL204W BCK1Q01389 1478 aa13.19□□□□□ -0.3
RTN2YDL204W SPE2P21182 396 aa13.19□□□□□ -0.3
RTN2YDL204W NAP1P25293 417 aaKnown RBP13.17□□□□□ -0.3
RTN2YDL204W YAP3P38749 330 aa13.17□□□□□ -0.3
RTN2YDL204W MLP1Q02455 1875 aaKnown RBP13.16□□□□□ -0.3
RTN2YDL204W DNF3Q12674 1656 aa13.15□□□□□ -0.3
RTN2YDL204W RAD9P14737 1309 aa13.13□□□□□ -0.31
RTN2YDL204W ALD4P46367 519 aaKnown RBP13.12□□□□□ -0.31
RTN2YDL204W TAF8Q03750 510 aa13.12□□□□□ -0.31
RTN2YDL204W PRS1P32895 427 aaKnown RBP13.11□□□□□ -0.31
RTN2YDL204W CAB1Q04430 367 aa13.06□□□□□ -0.32
RTN2YDL204W MRX12P47084 519 aa13.03□□□□□ -0.32
RTN2YDL204W NST1P53935 1240 aa13.02□□□□□ -0.33
RTN2YDL204W CHZ1P40019 153 aaPredicted RBP13.01□□□□□ -0.33
RTN2YDL204W RTG3P38165 486 aa12.99□□□□□ -0.33
RTN2YDL204W KRE5P22023 1365 aa12.98□□□□□ -0.33
RTN2YDL204W FKH1P40466 484 aa12.97□□□□□ -0.33
RTN2YDL204W CFT1Q06632 1357 aaKnown RBP12.96□□□□□ -0.33
RTN2YDL204W SNF2P22082 1703 aa12.95□□□□□ -0.34
RTN2YDL204W RIA1P53893 1110 aa12.92□□□□□ -0.34
Retrieved 100 of 5,963 RNA–protein pairs in 42.6 ms