RNA–Protein interactions for RNA: YDL185W

VMA1, Transcript of Subunit A of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA1, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA1	YDL185W	ISW2	Q08773	1120 aa		5.13	□□□□□ -1.59
VMA1	YDL185W	VPS15	P22219	1454 aa		5.13	□□□□□ -1.59
VMA1	YDL185W	DNF1	P32660	1571 aa		5.12	□□□□□ -1.59
VMA1	YDL185W	RPO31	P04051	1460 aa		5.12	□□□□□ -1.59
VMA1	YDL185W	TY2B-LR1	P0C2J3	1770 aa		5.12	□□□□□ -1.59
VMA1	YDL185W	TY2B-F	P0CX63	1770 aa		5.12	□□□□□ -1.59
VMA1	YDL185W	TY2B-GR2	P0CX64	1770 aa		5.12	□□□□□ -1.59
VMA1	YDL185W	TY2B-C	P25384	1770 aa		5.12	□□□□□ -1.59
VMA1	YDL185W	TY2B-DR2	Q03494	1770 aa		5.12	□□□□□ -1.59
VMA1	YDL185W	TY1B-DR1	Q03855	1755 aa		5.12	□□□□□ -1.59
VMA1	YDL185W	TY2B-DR3	Q07791	1770 aa	Known RBP	5.12	□□□□□ -1.59
VMA1	YDL185W	TY2B-OR1	Q12113	1770 aa		5.12	□□□□□ -1.59
VMA1	YDL185W	TY2B-DR1	Q12472	1770 aa		5.12	□□□□□ -1.59
VMA1	YDL185W	TY2B-OR2	Q12501	1770 aa		5.12	□□□□□ -1.59
VMA1	YDL185W	SNF7	P39929	240 aa	Known RBP	5.12	□□□□□ -1.59
VMA1	YDL185W	MHP1	P43638	1398 aa		5.11	□□□□□ -1.59
VMA1	YDL185W	EAF7	P53911	425 aa	Known RBP	5.11	□□□□□ -1.59
VMA1	YDL185W	MNN4	P36044	1178 aa		5.1	□□□□□ -1.59
VMA1	YDL185W	YBT1	P32386	1661 aa		5.1	□□□□□ -1.59
VMA1	YDL185W	GCN2	P15442	1659 aa		5.1	□□□□□ -1.59
VMA1	YDL185W	TY2B-B	Q12491	1770 aa		5.1	□□□□□ -1.59
VMA1	YDL185W	RPG1	P38249	964 aa	Known RBP	5.1	□□□□□ -1.59
VMA1	YDL185W	LEO1	P38439	464 aa		5.1	□□□□□ -1.59
VMA1	YDL185W	YIR014W	P40570	242 aa		5.09	□□□□□ -1.59
VMA1	YDL185W	MMS1	Q06211	1407 aa		5.09	□□□□□ -1.6
VMA1	YDL185W	REB1	P21538	810 aa		5.08	□□□□□ -1.6
VMA1	YDL185W	ROX1	P25042	368 aa		5.06	□□□□□ -1.6
VMA1	YDL185W	PDR5	P33302	1511 aa	Known RBP	5.06	□□□□□ -1.6
VMA1	YDL185W	NST1	P53935	1240 aa		5.06	□□□□□ -1.6
VMA1	YDL185W	ABP1	P15891	592 aa	Known RBP	5.05	□□□□□ -1.6
VMA1	YDL185W	SLN1	P39928	1220 aa	Predicted RBP	5.04	□□□□□ -1.6
VMA1	YDL185W	ORC1	P54784	914 aa	Predicted RBP	5.04	□□□□□ -1.6
VMA1	YDL185W	GEA2	P39993	1459 aa	Known RBP	5.03	□□□□□ -1.6
VMA1	YDL185W	GDB1	Q06625	1536 aa		5.02	□□□□□ -1.61
VMA1	YDL185W	TY1B-H	O13535	1793 aa		5.02	□□□□□ -1.61
VMA1	YDL185W	TY1B-DR5	P0C2I2	1755 aa		5.02	□□□□□ -1.61
VMA1	YDL185W	TY1B-DR6	P0C2I3	1755 aa		5.02	□□□□□ -1.61
VMA1	YDL185W	TY1B-LR2	P0C2I5	1755 aa		5.02	□□□□□ -1.61
VMA1	YDL185W	TY1B-LR3	P0C2I6	1755 aa	Known RBP	5.02	□□□□□ -1.61
VMA1	YDL185W	TY1B-PR1	P0C2I9	1755 aa	Known RBP	5.02	□□□□□ -1.61
VMA1	YDL185W	TY1B-PR2	P0C2J0	1756 aa		5.02	□□□□□ -1.61
VMA1	YDL185W	TY1B-PR3	P0C2J1	1755 aa	Known RBP	5.02	□□□□□ -1.61
VMA1	YDL185W	TY1B-JR1	P47098	1755 aa		5.02	□□□□□ -1.61
VMA1	YDL185W	TY1B-ML2	Q03434	1755 aa	Known RBP	5.02	□□□□□ -1.61
VMA1	YDL185W	TY1B-ER1	Q03612	1755 aa		5.02	□□□□□ -1.61
VMA1	YDL185W	TY1B-ML1	Q04711	1755 aa	Known RBP	5.02	□□□□□ -1.61
VMA1	YDL185W	TY1B-GR2	Q12269	1755 aa		5.02	□□□□□ -1.61
VMA1	YDL185W	TY1B-OL	Q12273	1755 aa		5.02	□□□□□ -1.61
VMA1	YDL185W	TY1B-PL	Q12414	1755 aa	Known RBP	5.02	□□□□□ -1.61
VMA1	YDL185W	YAH1	Q12184	172 aa	Known RBP	5.02	□□□□□ -1.61
VMA1	YDL185W	RVB2	Q12464	471 aa	Known RBP	5.02	□□□□□ -1.61
VMA1	YDL185W	PAF1	P38351	445 aa		5.01	□□□□□ -1.61
VMA1	YDL185W	YGR130C	P53278	816 aa		5.01	□□□□□ -1.61
VMA1	YDL185W	TY3B-I	Q7LHG5	1498 aa	Known RBP	5.01	□□□□□ -1.61
VMA1	YDL185W	FPR3	P38911	411 aa	Known RBP	5.01	□□□□□ -1.61
VMA1	YDL185W	DJP1	P40564	432 aa		5.01	□□□□□ -1.61
VMA1	YDL185W	CTR9	P89105	1077 aa		5.01	□□□□□ -1.61
VMA1	YDL185W	SNT2	P53127	1403 aa		5	□□□□□ -1.61
VMA1	YDL185W	PDS5	Q04264	1277 aa		5	□□□□□ -1.61
VMA1	YDL185W	QCR6	P00127	147 aa		4.99	□□□□□ -1.61
VMA1	YDL185W	PCT1	P13259	424 aa		4.99	□□□□□ -1.61
VMA1	YDL185W	AIM44	Q99299	758 aa		4.99	□□□□□ -1.61
VMA1	YDL185W	CDC45	Q08032	650 aa		4.99	□□□□□ -1.61
VMA1	YDL185W	KNS1	P32350	737 aa	Predicted RBP	4.98	□□□□□ -1.61
VMA1	YDL185W	VPS27	P40343	622 aa	Known RBP	4.98	□□□□□ -1.61
VMA1	YDL185W	TY1B-BR	Q12193	1756 aa		4.98	□□□□□ -1.61
VMA1	YDL185W	TY1B-GR3	Q12316	1755 aa		4.98	□□□□□ -1.61
VMA1	YDL185W	TY1B-OR	Q92393	1755 aa		4.98	□□□□□ -1.61
VMA1	YDL185W	EDE1	P34216	1381 aa		4.97	□□□□□ -1.61
VMA1	YDL185W	NUP157	P40064	1391 aa	Known RBP	4.97	□□□□□ -1.61
VMA1	YDL185W	RPP0	P05317	312 aa	Known RBP	4.97	□□□□□ -1.61
VMA1	YDL185W	ARO1	P08566	1588 aa	Known RBP	4.97	□□□□□ -1.61
VMA1	YDL185W	SPT21	P35209	758 aa		4.97	□□□□□ -1.61
VMA1	YDL185W	SSP1	P38871	571 aa		4.97	□□□□□ -1.61
VMA1	YDL185W	NOT3	P06102	836 aa	Known RBP	4.97	□□□□□ -1.61
VMA1	YDL185W	VTH1	P40438	1549 aa		4.97	□□□□□ -1.61
VMA1	YDL185W	VTH2	P40890	1549 aa		4.97	□□□□□ -1.61
VMA1	YDL185W	KIP3	P53086	805 aa	Known RBP	4.97	□□□□□ -1.61
VMA1	YDL185W	NOP7	P53261	605 aa	Known RBP	4.97	□□□□□ -1.61
VMA1	YDL185W	TY1B-JR2	P47100	1755 aa	Known RBP	4.96	□□□□□ -1.62
VMA1	YDL185W	TY1B-ER2	Q03619	1755 aa		4.96	□□□□□ -1.62
VMA1	YDL185W	TY1B-MR1	Q04214	1755 aa		4.96	□□□□□ -1.62
VMA1	YDL185W	TY1B-MR2	Q04670	1755 aa	Known RBP	4.96	□□□□□ -1.62
VMA1	YDL185W	TY1B-LR1	Q12088	1755 aa	Known RBP	4.96	□□□□□ -1.62
VMA1	YDL185W	TY1B-NL1	Q12112	1755 aa		4.96	□□□□□ -1.62
VMA1	YDL185W	TY1B-GR1	Q12141	1755 aa		4.96	□□□□□ -1.62
VMA1	YDL185W	TY1B-BL	Q12490	1755 aa		4.96	□□□□□ -1.62
VMA1	YDL185W	MSP1	P28737	362 aa		4.96	□□□□□ -1.62
VMA1	YDL185W	RLF2	Q12495	606 aa		4.96	□□□□□ -1.62
VMA1	YDL185W	NAP1	P25293	417 aa	Known RBP	4.95	□□□□□ -1.62
VMA1	YDL185W	CWC22	P53333	577 aa	Known RBP	4.95	□□□□□ -1.62
VMA1	YDL185W	CAT8	P39113	1433 aa		4.95	□□□□□ -1.62
VMA1	YDL185W	PDR12	Q02785	1511 aa		4.95	□□□□□ -1.62
VMA1	YDL185W	DNF2	Q12675	1612 aa		4.94	□□□□□ -1.62
VMA1	YDL185W	YPP1	P46951	817 aa		4.94	□□□□□ -1.62
VMA1	YDL185W	NOP53	Q12080	455 aa	Known RBP	4.94	□□□□□ -1.62
VMA1	YDL185W	NOP58	Q12499	511 aa	Known RBP	4.93	□□□□□ -1.62
VMA1	YDL185W	VPS24	P36095	224 aa	Known RBP	4.93	□□□□□ -1.62
VMA1	YDL185W	MDS3	P53094	1487 aa		4.92	□□□□□ -1.62
VMA1	YDL185W	IQG1	Q12280	1495 aa		4.92	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms