RNA–Protein interactions for RNA: YDL132W

CDC53, Transcript of Cullin, yeastyeast

Gene CDC53, Length 2,448 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC53YDL132W KIC1P38692 1080 aa3.49□□□□□ -1.85
CDC53YDL132W COX6P00427 148 aa3.49□□□□□ -1.85
CDC53YDL132W PTC3P34221 468 aaKnown RBP3.49□□□□□ -1.85
CDC53YDL132W NOP53Q12080 455 aaKnown RBP3.49□□□□□ -1.85
CDC53YDL132W ATH1P48016 1211 aa3.46□□□□□ -1.85
CDC53YDL132W HPC2Q01448 625 aa3.46□□□□□ -1.85
CDC53YDL132W MST1P07236 462 aa3.46□□□□□ -1.86
CDC53YDL132W PKC1P24583 1151 aa3.45□□□□□ -1.86
CDC53YDL132W RPL34BP40525 121 aaKnown RBP3.45□□□□□ -1.86
CDC53YDL132W YJL007CP47080 104 aa3.45□□□□□ -1.86
CDC53YDL132W SSA2P10592 639 aaKnown RBP3.44□□□□□ -1.86
CDC53YDL132W TIF4632P39936 914 aaKnown RBP3.44□□□□□ -1.86
CDC53YDL132W UBP14P38237 781 aaKnown RBP3.44□□□□□ -1.86
CDC53YDL132W CSN12P47130 423 aa3.44□□□□□ -1.86
CDC53YDL132W SSA1P10591 642 aaKnown RBP3.43□□□□□ -1.86
CDC53YDL132W YML020WQ03722 664 aa3.43□□□□□ -1.86
CDC53YDL132W GRE2Q12068 342 aaKnown RBP3.43□□□□□ -1.86
CDC53YDL132W RAD54P32863 898 aa3.42□□□□□ -1.86
CDC53YDL132W BIM1P40013 344 aa3.42□□□□□ -1.86
CDC53YDL132W YDR090CQ03193 310 aa3.42□□□□□ -1.86
CDC53YDL132W VMA1P17255 1071 aaKnown RBP3.41□□□□□ -1.86
CDC53YDL132W GEF1P37020 779 aa3.41□□□□□ -1.86
CDC53YDL132W YLR326WQ06170 240 aaKnown RBP3.41□□□□□ -1.86
CDC53YDL132W SLX8P40072 274 aa3.41□□□□□ -1.86
CDC53YDL132W ATG32P40458 529 aa3.41□□□□□ -1.86
CDC53YDL132W YAP5P40574 245 aa3.41□□□□□ -1.86
CDC53YDL132W TEA1P47988 759 aa3.4□□□□□ -1.86
CDC53YDL132W TYW1Q08960 810 aaKnown RBP3.4□□□□□ -1.86
CDC53YDL132W GUT1P32190 709 aa3.4□□□□□ -1.87
CDC53YDL132W PSE1P32337 1089 aaKnown RBP3.4□□□□□ -1.87
CDC53YDL132W YBL036CP38197 257 aa3.4□□□□□ -1.87
CDC53YDL132W SUB2Q07478 446 aaKnown RBP3.4□□□□□ -1.87
CDC53YDL132W SSA4P22202 642 aaKnown RBP3.39□□□□□ -1.87
CDC53YDL132W YPR204WQ08995 1032 aa3.39□□□□□ -1.87
CDC53YDL132W KEX1P09620 729 aa3.39□□□□□ -1.87
CDC53YDL132W YMR196WQ04336 1088 aa3.39□□□□□ -1.87
CDC53YDL132W ERG12P07277 443 aa3.38□□□□□ -1.87
CDC53YDL132W NSR1P27476 414 aaKnown RBP RIP-Chip data3.38□□□□□ -1.87not detected
CDC53YDL132W CPS1P27614 576 aa3.38□□□□□ -1.87
CDC53YDL132W PCS60P38137 543 aaKnown RBP RIP-Chip data3.38□□□□□ -1.87not detected
CDC53YDL132W YGR273CP53329 174 aa3.38□□□□□ -1.87
CDC53YDL132W RPL34AP87262 121 aaPredicted RBP3.38□□□□□ -1.87
CDC53YDL132W RGA2Q06407 1009 aa3.38□□□□□ -1.87
CDC53YDL132W GLN1P32288 370 aaKnown RBP3.38□□□□□ -1.87
CDC53YDL132W GTT3P39996 337 aa3.38□□□□□ -1.87
CDC53YDL132W GYP5Q12344 894 aa3.38□□□□□ -1.87
CDC53YDL132W TIF1P10081 395 aaKnown RBP3.37□□□□□ -1.87
CDC53YDL132W PKH3Q03306 898 aaPredicted RBP3.36□□□□□ -1.87
CDC53YDL132W DCW1P36091 449 aa3.36□□□□□ -1.87
CDC53YDL132W RTG2P32608 588 aaKnown RBP3.35□□□□□ -1.87
CDC53YDL132W KTR1P27810 393 aaKnown RBP3.35□□□□□ -1.87
CDC53YDL132W ORC6P38826 435 aa3.35□□□□□ -1.87
CDC53YDL132W YNL108CP53929 270 aa3.35□□□□□ -1.87
CDC53YDL132W BIO2P32451 375 aa3.34□□□□□ -1.87
CDC53YDL132W UBP9P39967 754 aa3.34□□□□□ -1.87
CDC53YDL132W YBL029C-AQ3E756 94 aa3.34□□□□□ -1.87
CDC53YDL132W ESS1P22696 170 aa3.34□□□□□ -1.87
CDC53YDL132W AIM44Q99299 758 aa3.33□□□□□ -1.88
CDC53YDL132W ARG8P18544 423 aa3.33□□□□□ -1.88
CDC53YDL132W SCJ1P25303 377 aa3.33□□□□□ -1.88
CDC53YDL132W CLB5P30283 435 aa3.33□□□□□ -1.88
CDC53YDL132W RAD59Q12223 238 aa3.33□□□□□ -1.88
CDC53YDL132W MMP1Q12372 583 aa3.33□□□□□ -1.88
CDC53YDL132W SOL3P38858 249 aa3.32□□□□□ -1.88
CDC53YDL132W SET4P42948 560 aa3.32□□□□□ -1.88
CDC53YDL132W NIS1P53939 407 aa3.32□□□□□ -1.88
CDC53YDL132W RPP1BP10622 106 aaKnown RBP3.32□□□□□ -1.88
CDC53YDL132W RGR1P19263 1082 aa3.32□□□□□ -1.88
CDC53YDL132W SLD2P34252 453 aa3.32□□□□□ -1.88
CDC53YDL132W VNX1P42839 908 aa3.32□□□□□ -1.88
CDC53YDL132W PEX21P50091 288 aa3.32□□□□□ -1.88
CDC53YDL132W FPK1P53739 893 aa3.32□□□□□ -1.88
CDC53YDL132W NOP8Q08287 484 aaPredicted RBP3.32□□□□□ -1.88
CDC53YDL132W HTA1P04911 132 aaKnown RBP3.31□□□□□ -1.88
CDC53YDL132W HTA2P04912 132 aa3.31□□□□□ -1.88
CDC53YDL132W TTI1P36097 1038 aa3.31□□□□□ -1.88
CDC53YDL132W MVP1P40959 511 aaKnown RBP3.31□□□□□ -1.88
CDC53YDL132W NOP7P53261 605 aaKnown RBP3.31□□□□□ -1.88
CDC53YDL132W YPR109WQ06104 294 aa3.31□□□□□ -1.88
CDC53YDL132W SAM3Q08986 587 aa3.31□□□□□ -1.88
CDC53YDL132W YJU3P28321 313 aa3.3□□□□□ -1.88
CDC53YDL132W YOL036WQ08206 761 aa3.3□□□□□ -1.88
CDC53YDL132W CDC3P32457 520 aaKnown RBP3.3□□□□□ -1.88
CDC53YDL132W HST2P53686 357 aa3.3□□□□□ -1.88
CDC53YDL132W YML083CQ04526 418 aa3.29□□□□□ -1.88
CDC53YDL132W ILV3P39522 585 aaKnown RBP3.29□□□□□ -1.88
CDC53YDL132W NOB1Q08444 459 aaKnown RBP3.29□□□□□ -1.88
CDC53YDL132W ENO1P00924 437 aaKnown RBP3.28□□□□□ -1.88
CDC53YDL132W ENO2P00925 437 aaKnown RBP3.28□□□□□ -1.89
CDC53YDL132W SLY41P22215 453 aa3.28□□□□□ -1.89
CDC53YDL132W YDJ1P25491 409 aaKnown RBP3.28□□□□□ -1.89
CDC53YDL132W CSE4P36012 229 aa3.28□□□□□ -1.89
CDC53YDL132W SLI15P38283 698 aa3.28□□□□□ -1.89
CDC53YDL132W KTR7P40504 517 aa3.28□□□□□ -1.89
CDC53YDL132W CSC1Q06538 782 aa3.28□□□□□ -1.89
CDC53YDL132W CDC73Q06697 393 aa3.28□□□□□ -1.89
CDC53YDL132W WSC3Q12215 556 aa3.28□□□□□ -1.89
CDC53YDL132W HAT1Q12341 374 aa3.28□□□□□ -1.89
CDC53YDL132W AI4P03878 556 aa3.27□□□□□ -1.89
CDC53YDL132W MPH3P0CE00 602 aa3.27□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 44.9 ms