RNA–Protein interactions for RNA: YDL074C

BRE1, Transcript of E3 ubiquitin ligase, yeastyeast

Gene BRE1, Length 2,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE1YDL074C STU1P38198 1513 aa3.14□□□□□ -1.91
BRE1YDL074C MDS3P53094 1487 aa3.13□□□□□ -1.91
BRE1YDL074C YNL035CP53962 389 aaKnown RBP3.13□□□□□ -1.91
BRE1YDL074C PEP1P32319 1579 aa3.13□□□□□ -1.91
BRE1YDL074C MMS22Q06164 1454 aa3.13□□□□□ -1.91
BRE1YDL074C SAP30P38429 201 aa3.13□□□□□ -1.91
BRE1YDL074C RKR1Q04781 1562 aa3.12□□□□□ -1.91
BRE1YDL074C MYO4P32492 1471 aa3.12□□□□□ -1.91
BRE1YDL074C MSB4Q12317 492 aa3.11□□□□□ -1.91
BRE1YDL074C SCC2Q04002 1493 aa3.11□□□□□ -1.91
BRE1YDL074C RPO31P04051 1460 aa3.11□□□□□ -1.91
BRE1YDL074C YOR1P53049 1477 aa3.11□□□□□ -1.91
BRE1YDL074C TOP2P06786 1428 aaKnown RBP3.1□□□□□ -1.91
BRE1YDL074C SMC4Q12267 1418 aa3.1□□□□□ -1.91
BRE1YDL074C TRP5P00931 707 aaKnown RBP3.1□□□□□ -1.91
BRE1YDL074C GBP2P25555 427 aaKnown RBP RIP-Chip data3.1□□□□□ -1.91not detected
BRE1YDL074C MTC5Q03897 1148 aa3.09□□□□□ -1.91
BRE1YDL074C PIB1Q06651 286 aa3.08□□□□□ -1.92
BRE1YDL074C UFD4P33202 1483 aa3.08□□□□□ -1.92
BRE1YDL074C OXP1P28273 1286 aa3.08□□□□□ -1.92
BRE1YDL074C YCF1P39109 1515 aaKnown RBP3.07□□□□□ -1.92
BRE1YDL074C BBC1P47068 1157 aa3.07□□□□□ -1.92
BRE1YDL074C SAS10Q12136 610 aaPredicted RBP3.07□□□□□ -1.92
BRE1YDL074C BPT1P14772 1559 aa3.06□□□□□ -1.92
BRE1YDL074C TY2B-LR1P0C2J3 1770 aa3.06□□□□□ -1.92
BRE1YDL074C TY2B-FP0CX63 1770 aa3.06□□□□□ -1.92
BRE1YDL074C TY2B-GR2P0CX64 1770 aa3.06□□□□□ -1.92
BRE1YDL074C TY2B-CP25384 1770 aa3.06□□□□□ -1.92
BRE1YDL074C STH1P32597 1359 aa3.06□□□□□ -1.92
BRE1YDL074C TY2B-DR2Q03494 1770 aa3.06□□□□□ -1.92
BRE1YDL074C TY1B-DR1Q03855 1755 aa3.06□□□□□ -1.92
BRE1YDL074C TY2B-DR3Q07791 1770 aaKnown RBP3.06□□□□□ -1.92
BRE1YDL074C TY2B-OR1Q12113 1770 aa3.06□□□□□ -1.92
BRE1YDL074C TY2B-DR1Q12472 1770 aa3.06□□□□□ -1.92
BRE1YDL074C TY2B-OR2Q12501 1770 aa3.06□□□□□ -1.92
BRE1YDL074C SET4P42948 560 aa3.05□□□□□ -1.92
BRE1YDL074C YOL036WQ08206 761 aa3.05□□□□□ -1.92
BRE1YDL074C TY1B-DR3Q99231 1755 aa3.05□□□□□ -1.92
BRE1YDL074C MLP2P40457 1679 aa3.05□□□□□ -1.92
BRE1YDL074C TY2B-BQ12491 1770 aa3.04□□□□□ -1.92
BRE1YDL074C PTP3P40048 928 aa3.04□□□□□ -1.92
BRE1YDL074C SNQ2P32568 1501 aaKnown RBP3.03□□□□□ -1.92
BRE1YDL074C SPP41P38904 1435 aa3.03□□□□□ -1.92
BRE1YDL074C TY1B-HO13535 1793 aa3.03□□□□□ -1.93
BRE1YDL074C TY1B-DR5P0C2I2 1755 aa3.03□□□□□ -1.93
BRE1YDL074C TY1B-DR6P0C2I3 1755 aa3.03□□□□□ -1.93
BRE1YDL074C TY1B-LR2P0C2I5 1755 aa3.03□□□□□ -1.93
BRE1YDL074C TY1B-LR3P0C2I6 1755 aaKnown RBP3.03□□□□□ -1.93
BRE1YDL074C TY1B-PR1P0C2I9 1755 aaKnown RBP3.03□□□□□ -1.93
BRE1YDL074C TY1B-PR2P0C2J0 1756 aa3.03□□□□□ -1.93
BRE1YDL074C TY1B-PR3P0C2J1 1755 aaKnown RBP3.03□□□□□ -1.93
BRE1YDL074C TY1B-JR1P47098 1755 aa3.03□□□□□ -1.93
BRE1YDL074C TY1B-ML2Q03434 1755 aaKnown RBP3.03□□□□□ -1.93
BRE1YDL074C TY1B-ER1Q03612 1755 aa3.03□□□□□ -1.93
BRE1YDL074C TY1B-ML1Q04711 1755 aaKnown RBP3.03□□□□□ -1.93
BRE1YDL074C TY1B-GR2Q12269 1755 aa3.03□□□□□ -1.93
BRE1YDL074C TY1B-OLQ12273 1755 aa3.03□□□□□ -1.93
BRE1YDL074C TY1B-PLQ12414 1755 aaKnown RBP3.03□□□□□ -1.93
BRE1YDL074C IKI3Q06706 1349 aaKnown RBP3.03□□□□□ -1.93
BRE1YDL074C AI2P03876 854 aa3.02□□□□□ -1.93
BRE1YDL074C RQC2Q12532 1038 aaKnown RBP3.02□□□□□ -1.93
BRE1YDL074C TY1B-BRQ12193 1756 aa3.02□□□□□ -1.93
BRE1YDL074C TY1B-GR3Q12316 1755 aa3.02□□□□□ -1.93
BRE1YDL074C TY1B-ORQ92393 1755 aa3.02□□□□□ -1.93
BRE1YDL074C CDC25P04821 1589 aa3.02□□□□□ -1.93
BRE1YDL074C PAN1P32521 1480 aa3.01□□□□□ -1.93
BRE1YDL074C TSC11P40061 1430 aa3.01□□□□□ -1.93
BRE1YDL074C VTH1P40438 1549 aa3□□□□□ -1.93
BRE1YDL074C VTH2P40890 1549 aa3□□□□□ -1.93
BRE1YDL074C YIL055CP40523 627 aaKnown RBP3□□□□□ -1.93
BRE1YDL074C DAN4P47179 1161 aa3□□□□□ -1.93
BRE1YDL074C PDR15Q04182 1529 aaKnown RBP3□□□□□ -1.93
BRE1YDL074C ESC1Q03661 1658 aaKnown RBP3□□□□□ -1.93
BRE1YDL074C TRM732Q03496 1420 aa3□□□□□ -1.93
BRE1YDL074C RTT106P40161 455 aa2.99□□□□□ -1.93
BRE1YDL074C YDL129WQ07555 291 aa2.99□□□□□ -1.93
BRE1YDL074C GEA1P47102 1408 aaPredicted RBP2.99□□□□□ -1.93
BRE1YDL074C TRK1P12685 1235 aa2.99□□□□□ -1.93
BRE1YDL074C IFH1P39520 1085 aa2.98□□□□□ -1.93
BRE1YDL074C CAT8P39113 1433 aa2.98□□□□□ -1.93
BRE1YDL074C GEA2P39993 1459 aaKnown RBP2.98□□□□□ -1.93
BRE1YDL074C RSM7P47150 247 aa2.98□□□□□ -1.93
BRE1YDL074C ULS1Q08562 1619 aa2.98□□□□□ -1.93
BRE1YDL074C NUP170P38181 1502 aa2.97□□□□□ -1.93
BRE1YDL074C TY1B-JR2P47100 1755 aaKnown RBP2.97□□□□□ -1.93
BRE1YDL074C TY1B-ER2Q03619 1755 aa2.97□□□□□ -1.93
BRE1YDL074C TY1B-MR1Q04214 1755 aa2.97□□□□□ -1.93
BRE1YDL074C TY1B-MR2Q04670 1755 aaKnown RBP2.97□□□□□ -1.93
BRE1YDL074C TY1B-LR1Q12088 1755 aaKnown RBP2.97□□□□□ -1.93
BRE1YDL074C TY1B-NL1Q12112 1755 aa2.97□□□□□ -1.93
BRE1YDL074C TY1B-GR1Q12141 1755 aa2.97□□□□□ -1.93
BRE1YDL074C TY1B-BLQ12490 1755 aa2.97□□□□□ -1.93
BRE1YDL074C SNT2P53127 1403 aa2.97□□□□□ -1.93
BRE1YDL074C RPO21P04050 1733 aaKnown RBP2.97□□□□□ -1.93
BRE1YDL074C NTE1Q04958 1679 aa2.96□□□□□ -1.93
BRE1YDL074C RPA190P10964 1664 aaKnown RBP2.96□□□□□ -1.94
BRE1YDL074C JIP4Q03361 876 aa2.95□□□□□ -1.94
BRE1YDL074C MET10P39692 1035 aa2.93□□□□□ -1.94
BRE1YDL074C YBT1P32386 1661 aa2.93□□□□□ -1.94
BRE1YDL074C MET5P47169 1442 aa2.93□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms