RNA–Protein interactions for RNA: YDL033C

SLM3, Transcript of tRNA-specific 2-thiouridylase, yeastyeast

Gene SLM3, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLM3YDL033C VPS15P22219 1454 aa12.06□□□□□ -0.48
SLM3YDL033C NTE1Q04958 1679 aa12.06□□□□□ -0.48
SLM3YDL033C ABP1P15891 592 aaKnown RBP12.05□□□□□ -0.48
SLM3YDL033C MMS1Q06211 1407 aa12.04□□□□□ -0.48
SLM3YDL033C TSC11P40061 1430 aa12.03□□□□□ -0.48
SLM3YDL033C DRS2P39524 1355 aa12.03□□□□□ -0.48
SLM3YDL033C VTH1P40438 1549 aa12.02□□□□□ -0.48
SLM3YDL033C VTH2P40890 1549 aa12.02□□□□□ -0.48
SLM3YDL033C RPO21P04050 1733 aaKnown RBP12□□□□□ -0.49
SLM3YDL033C MYO4P32492 1471 aa11.93□□□□□ -0.5
SLM3YDL033C IRC20Q06554 1556 aa11.88□□□□□ -0.51
SLM3YDL033C YFR006WP43590 535 aa11.86□□□□□ -0.51
SLM3YDL033C SNQ2P32568 1501 aaKnown RBP11.85□□□□□ -0.51
SLM3YDL033C NUP170P38181 1502 aa11.84□□□□□ -0.51
SLM3YDL033C SNT2P53127 1403 aa11.84□□□□□ -0.51
SLM3YDL033C DNF2Q12675 1612 aa11.82□□□□□ -0.52
SLM3YDL033C YTA7P40340 1379 aa11.82□□□□□ -0.52
SLM3YDL033C MET10P39692 1035 aa11.78□□□□□ -0.52
SLM3YDL033C ULS1Q08562 1619 aa11.78□□□□□ -0.52
SLM3YDL033C STH1P32597 1359 aa11.78□□□□□ -0.52
SLM3YDL033C SPO14P36126 1683 aa11.78□□□□□ -0.52
SLM3YDL033C RTT106P40161 455 aa11.72□□□□□ -0.53
SLM3YDL033C PDR12Q02785 1511 aa11.7□□□□□ -0.54
SLM3YDL033C DOP1Q03921 1698 aa11.68□□□□□ -0.54
SLM3YDL033C MLP2P40457 1679 aa11.67□□□□□ -0.54
SLM3YDL033C GDB1Q06625 1536 aa11.63□□□□□ -0.55
SLM3YDL033C IQG1Q12280 1495 aa11.63□□□□□ -0.55
SLM3YDL033C TRM3Q07527 1436 aa11.61□□□□□ -0.55
SLM3YDL033C NUP157P40064 1391 aaKnown RBP11.61□□□□□ -0.55
SLM3YDL033C PDR10P51533 1564 aa11.61□□□□□ -0.55
SLM3YDL033C YOR093CQ12275 1648 aa11.57□□□□□ -0.56
SLM3YDL033C BUD3P25558 1636 aa11.55□□□□□ -0.56
SLM3YDL033C PDR15Q04182 1529 aaKnown RBP11.55□□□□□ -0.56
SLM3YDL033C SAS10Q12136 610 aaPredicted RBP11.5□□□□□ -0.57
SLM3YDL033C CHC1P22137 1653 aaKnown RBP11.46□□□□□ -0.58
SLM3YDL033C BFR2Q06631 534 aaKnown RBP11.44□□□□□ -0.58
SLM3YDL033C ARO1P08566 1588 aaKnown RBP11.44□□□□□ -0.58
SLM3YDL033C TAF7Q05021 590 aa11.42□□□□□ -0.58
SLM3YDL033C IFH1P39520 1085 aa11.41□□□□□ -0.58
SLM3YDL033C DNF3Q12674 1656 aa11.36□□□□□ -0.59
SLM3YDL033C CAT8P39113 1433 aa11.33□□□□□ -0.6
SLM3YDL033C SEC7P11075 2009 aaKnown RBP11.31□□□□□ -0.6
SLM3YDL033C GEA1P47102 1408 aaPredicted RBP11.3□□□□□ -0.6
SLM3YDL033C YBT1P32386 1661 aa11.3□□□□□ -0.6
SLM3YDL033C DIP2Q12220 943 aaPredicted RBP11.29□□□□□ -0.6
SLM3YDL033C TY3B-GQ99315 1547 aa11.27□□□□□ -0.61
SLM3YDL033C YAP3P38749 330 aa11.27□□□□□ -0.61
SLM3YDL033C CKB1P43639 278 aa11.27□□□□□ -0.61
SLM3YDL033C BNR1P40450 1375 aa11.24□□□□□ -0.61
SLM3YDL033C YSP2Q06681 1438 aa11.24□□□□□ -0.61
SLM3YDL033C MAK10Q02197 733 aa11.18□□□□□ -0.62
SLM3YDL033C AVT3P36062 692 aa11.17□□□□□ -0.62
SLM3YDL033C URN1Q06525 465 aaKnown RBP11.14□□□□□ -0.63
SLM3YDL033C NOP2P40991 618 aaKnown RBP11.13□□□□□ -0.63
SLM3YDL033C USO1P25386 1790 aa11.11□□□□□ -0.63
SLM3YDL033C SRB8P25648 1427 aa11.04□□□□□ -0.64
SLM3YDL033C IML1P47170 1584 aa10.99□□□□□ -0.65
SLM3YDL033C IPL1P38991 367 aa10.98□□□□□ -0.65
SLM3YDL033C NUP188P52593 1655 aaKnown RBP10.96□□□□□ -0.65
SLM3YDL033C BUD21Q08492 214 aaPredicted RBP10.96□□□□□ -0.65
SLM3YDL033C HAP1P0CE41 1502 aa10.94□□□□□ -0.66
SLM3YDL033C TY1B-NL2Q99337 1749 aaKnown RBP10.94□□□□□ -0.66
SLM3YDL033C YMR196WQ04336 1088 aa10.93□□□□□ -0.66
SLM3YDL033C TYS1P36421 394 aaKnown RBP10.92□□□□□ -0.66
SLM3YDL033C THI12P42883 340 aa10.92□□□□□ -0.66
SLM3YDL033C THI5P43534 340 aa10.92□□□□□ -0.66
SLM3YDL033C THI11P47183 340 aa10.92□□□□□ -0.66
SLM3YDL033C THI13Q07748 340 aa10.92□□□□□ -0.66
SLM3YDL033C VMR1P38735 1592 aa10.9□□□□□ -0.67
SLM3YDL033C NSR1P27476 414 aaKnown RBP RIP-Chip data10.87□□□□□ -0.67not detected
SLM3YDL033C PDR5P33302 1511 aaKnown RBP10.82□□□□□ -0.68
SLM3YDL033C TFA1P36100 482 aa10.8□□□□□ -0.68
SLM3YDL033C FAP1P53971 965 aa10.8□□□□□ -0.68
SLM3YDL033C ISW2Q08773 1120 aa10.73□□□□□ -0.69
SLM3YDL033C YAH1Q12184 172 aaKnown RBP10.68□□□□□ -0.7
SLM3YDL033C IKI3Q06706 1349 aaKnown RBP10.67□□□□□ -0.7
SLM3YDL033C KRE5P22023 1365 aa10.66□□□□□ -0.7
SLM3YDL033C PDR11P40550 1411 aa10.65□□□□□ -0.7
SLM3YDL033C PRI1P10363 409 aa10.64□□□□□ -0.71
SLM3YDL033C MRX12P47084 519 aa10.64□□□□□ -0.71
SLM3YDL033C RIA1P53893 1110 aa10.64□□□□□ -0.71
SLM3YDL033C GLN1P32288 370 aaKnown RBP10.63□□□□□ -0.71
SLM3YDL033C CFT1Q06632 1357 aaKnown RBP10.63□□□□□ -0.71
SLM3YDL033C APP1P53933 587 aa10.62□□□□□ -0.71
SLM3YDL033C GCN2P15442 1659 aa10.62□□□□□ -0.71
SLM3YDL033C RPG1P38249 964 aaKnown RBP10.61□□□□□ -0.71
SLM3YDL033C SSM4P40318 1319 aa10.6□□□□□ -0.71
SLM3YDL033C PTP3P40048 928 aa10.59□□□□□ -0.71
SLM3YDL033C YIL055CP40523 627 aaKnown RBP10.58□□□□□ -0.72
SLM3YDL033C YNR029CP53729 429 aaKnown RBP10.58□□□□□ -0.72
SLM3YDL033C BCK1Q01389 1478 aa10.55□□□□□ -0.72
SLM3YDL033C ENP1P38333 483 aaKnown RBP10.54□□□□□ -0.72
SLM3YDL033C NUP192P47054 1683 aa10.5□□□□□ -0.73
SLM3YDL033C REB1P21538 810 aa10.49□□□□□ -0.73
SLM3YDL033C CAB1Q04430 367 aa10.49□□□□□ -0.73
SLM3YDL033C PAF1P38351 445 aa10.48□□□□□ -0.73
SLM3YDL033C RAV1P47104 1357 aa10.48□□□□□ -0.73
SLM3YDL033C RAD9P14737 1309 aa10.45□□□□□ -0.74
SLM3YDL033C AAD16Q02895 342 aa10.45□□□□□ -0.74
SLM3YDL033C ENT1Q12518 454 aa10.45□□□□□ -0.74
Retrieved 100 of 5,963 RNA–protein pairs in 9.1 ms