RNA–Protein interactions for RNA: YDL002C

NHP10, Transcript of Non-essential INO80 chromatin remodeling complex subunit, yeastyeast

Gene NHP10, Length 612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NHP10YDL002C RAM2P29703 316 aa9.55□□□□□ -0.88
NHP10YDL002C YEL023CP39992 682 aa9.55□□□□□ -0.88
NHP10YDL002C PTC4P38089 393 aa9.53□□□□□ -0.88
NHP10YDL002C SAP30P38429 201 aa9.53□□□□□ -0.88
NHP10YDL002C GRE2Q12068 342 aaKnown RBP9.53□□□□□ -0.88
NHP10YDL002C YDL129WQ07555 291 aa9.5□□□□□ -0.89
NHP10YDL002C ATH1P48016 1211 aa9.47□□□□□ -0.89
NHP10YDL002C EDS1P38073 919 aa9.46□□□□□ -0.9
NHP10YDL002C PTC3P34221 468 aaKnown RBP9.45□□□□□ -0.9
NHP10YDL002C COQ8P27697 501 aa9.42□□□□□ -0.9
NHP10YDL002C GUT1P32190 709 aa9.42□□□□□ -0.9
NHP10YDL002C CHL1P22516 861 aaPredicted RBP9.38□□□□□ -0.91
NHP10YDL002C PML39Q03760 334 aa9.37□□□□□ -0.91
NHP10YDL002C PRE3P38624 215 aa9.36□□□□□ -0.91
NHP10YDL002C BCK2P33306 851 aa9.32□□□□□ -0.92
NHP10YDL002C SOL3P38858 249 aa9.28□□□□□ -0.92
NHP10YDL002C NST1P53935 1240 aa9.27□□□□□ -0.93
NHP10YDL002C ELP4Q02884 456 aaKnown RBP9.27□□□□□ -0.93
NHP10YDL002C YDR344CQ05510 147 aa9.26□□□□□ -0.93
NHP10YDL002C MID1P41821 548 aa9.25□□□□□ -0.93
NHP10YDL002C MPH3P0CE00 602 aa9.23□□□□□ -0.93
NHP10YDL002C NOP53Q12080 455 aaKnown RBP9.23□□□□□ -0.93
NHP10YDL002C AI4P03878 556 aa9.22□□□□□ -0.93
NHP10YDL002C PEX29Q03370 554 aa9.21□□□□□ -0.94
NHP10YDL002C VRP1P37370 817 aa9.18□□□□□ -0.94
NHP10YDL002C ILV3P39522 585 aaKnown RBP9.17□□□□□ -0.94
NHP10YDL002C ARH1P48360 493 aa9.17□□□□□ -0.94
NHP10YDL002C YGR273CP53329 174 aa9.17□□□□□ -0.94
NHP10YDL002C SPT23P35210 1082 aa9.09□□□□□ -0.95
NHP10YDL002C XDJ1P39102 459 aa9.09□□□□□ -0.95
NHP10YDL002C HAP5Q02516 242 aa9.08□□□□□ -0.96
NHP10YDL002C SET1P38827 1080 aaKnown RBP9.07□□□□□ -0.96
NHP10YDL002C MPC54Q08550 464 aa9.05□□□□□ -0.96
NHP10YDL002C SLI15P38283 698 aa9.03□□□□□ -0.96
NHP10YDL002C BNI4P53858 892 aa9□□□□□ -0.97
NHP10YDL002C NMA111P53920 997 aa9□□□□□ -0.97
NHP10YDL002C KEX1P09620 729 aa8.99□□□□□ -0.97
NHP10YDL002C PTC2P39966 464 aaKnown RBP8.99□□□□□ -0.97
NHP10YDL002C DPL1Q05567 589 aa8.98□□□□□ -0.97
NHP10YDL002C YML082WQ04533 649 aaKnown RBP8.94□□□□□ -0.98
NHP10YDL002C DPS1P04802 557 aaKnown RBP8.93□□□□□ -0.98
NHP10YDL002C VHR2P40041 505 aa8.93□□□□□ -0.98
NHP10YDL002C YLR326WQ06170 240 aaKnown RBP8.91□□□□□ -0.98
NHP10YDL002C UBP14P38237 781 aaKnown RBP8.89□□□□□ -0.99
NHP10YDL002C CDC73Q06697 393 aa8.88□□□□□ -0.99
NHP10YDL002C ISU2Q12056 156 aa8.87□□□□□ -0.99
NHP10YDL002C RAD54P32863 898 aa8.85□□□□□ -0.99
NHP10YDL002C PCS60P38137 543 aaKnown RBP RIP-Chip data8.85□□□□□ -0.99not detected
NHP10YDL002C IFH1P39520 1085 aa8.82□□□□□ -1
NHP10YDL002C YPR015CQ12531 247 aa8.8□□□□□ -1
NHP10YDL002C RPP1BP10622 106 aaKnown RBP8.79□□□□□ -1
NHP10YDL002C RAM1P22007 431 aa8.77□□□□□ -1.01
NHP10YDL002C KIC1P38692 1080 aa8.77□□□□□ -1.01
NHP10YDL002C PDR1P12383 1068 aa8.76□□□□□ -1.01
NHP10YDL002C GYP1Q08484 637 aa8.74□□□□□ -1.01
NHP10YDL002C YDR090CQ03193 310 aa8.73□□□□□ -1.01
NHP10YDL002C YPR148CQ06523 435 aa8.71□□□□□ -1.02
NHP10YDL002C REF2P42073 533 aaPredicted RBP8.7□□□□□ -1.02
NHP10YDL002C PEX21P50091 288 aa8.69□□□□□ -1.02
NHP10YDL002C RAS1P01119 309 aa8.67□□□□□ -1.02
NHP10YDL002C VPS70P47161 811 aa8.67□□□□□ -1.02
NHP10YDL002C SRC1Q03707 834 aa8.66□□□□□ -1.02
NHP10YDL002C YRR1Q12172 810 aa8.64□□□□□ -1.03
NHP10YDL002C SAS4Q04003 481 aa8.63□□□□□ -1.03
NHP10YDL002C CSC1Q06538 782 aa8.61□□□□□ -1.03
NHP10YDL002C GAP1P19145 602 aaPredicted RBP8.59□□□□□ -1.03
NHP10YDL002C AMS1P22855 1083 aa8.59□□□□□ -1.03
NHP10YDL002C TUM1Q08686 304 aaKnown RBP8.59□□□□□ -1.03
NHP10YDL002C TFB4Q12004 338 aa8.59□□□□□ -1.03
NHP10YDL002C BUD20Q08004 166 aaPredicted RBP8.57□□□□□ -1.04
NHP10YDL002C COX6P00427 148 aa8.56□□□□□ -1.04
NHP10YDL002C SDH2P21801 266 aa8.55□□□□□ -1.04
NHP10YDL002C ORC6P38826 435 aa8.55□□□□□ -1.04
NHP10YDL002C MAK21Q12176 1025 aaKnown RBP8.55□□□□□ -1.04
NHP10YDL002C PRT1P06103 763 aaKnown RBP8.54□□□□□ -1.04
NHP10YDL002C NUD1P32336 851 aa8.54□□□□□ -1.04
NHP10YDL002C STR2P47164 639 aa8.54□□□□□ -1.04
NHP10YDL002C ISM1P48526 1002 aa8.53□□□□□ -1.04
NHP10YDL002C YEL077CQ3E7X8 1277 aa8.53□□□□□ -1.04
NHP10YDL002C MRF1P30775 413 aaPredicted RBP8.52□□□□□ -1.05
NHP10YDL002C NPL4P33755 580 aa8.52□□□□□ -1.05
NHP10YDL002C MVP1P40959 511 aaKnown RBP8.48□□□□□ -1.05
NHP10YDL002C TRK1P12685 1235 aa8.46□□□□□ -1.06
NHP10YDL002C GCD11P32481 527 aaKnown RBP8.46□□□□□ -1.06
NHP10YDL002C ERG12P07277 443 aa8.45□□□□□ -1.06
NHP10YDL002C RGR1P19263 1082 aa8.44□□□□□ -1.06
NHP10YDL002C YPR109WQ06104 294 aa8.44□□□□□ -1.06
NHP10YDL002C CKB1P43639 278 aa8.43□□□□□ -1.06
NHP10YDL002C PBS2P08018 668 aa8.42□□□□□ -1.06
NHP10YDL002C SPT16P32558 1035 aaKnown RBP8.41□□□□□ -1.06
NHP10YDL002C TY1A-DR4O74302 440 aa8.4□□□□□ -1.06
NHP10YDL002C TY1A-HP0C2I4 478 aaKnown RBP8.4□□□□□ -1.06
NHP10YDL002C TY1A-AP0CX57 440 aa8.4□□□□□ -1.06
NHP10YDL002C TY1A-PR1P0CX58 440 aa8.4□□□□□ -1.06
NHP10YDL002C TY1A-ORP0CX59 440 aa8.4□□□□□ -1.06
NHP10YDL002C TY1A-PR2P0CX60 440 aa8.4□□□□□ -1.06
NHP10YDL002C TY1A-DR5P0CX65 440 aa8.4□□□□□ -1.06
NHP10YDL002C TY1A-ER2P0CX66 440 aa8.4□□□□□ -1.06
NHP10YDL002C TY1A-GR3P0CX67 440 aa8.4□□□□□ -1.06
NHP10YDL002C TY1A-LR1P0CX68 440 aa8.4□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 16 ms