RNA–Protein interactions for RNA: YCR086W

CSM1, Transcript of Nucleolar protein that mediates homolog segregation during meiosis I, yeastyeast

Gene CSM1, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSM1YCR086W MET5P47169 1442 aa14.12□□□□□ -0.15
CSM1YCR086W NUP159P40477 1460 aa14.07□□□□□ -0.16
CSM1YCR086W NTE1Q04958 1679 aa14.07□□□□□ -0.16
CSM1YCR086W SNT2P53127 1403 aa14.06□□□□□ -0.16
CSM1YCR086W MLP2P40457 1679 aa14.04□□□□□ -0.16
CSM1YCR086W RPO21P04050 1733 aaKnown RBP14.03□□□□□ -0.16
CSM1YCR086W ULS1Q08562 1619 aa14.01□□□□□ -0.17
CSM1YCR086W PDR15Q04182 1529 aaKnown RBP14.01□□□□□ -0.17
CSM1YCR086W TAF7Q05021 590 aa14□□□□□ -0.17
CSM1YCR086W YRF1-1P0CX20 1796 aa13.98□□□□□ -0.17
CSM1YCR086W YRF1-5P0CX21 1796 aa13.98□□□□□ -0.17
CSM1YCR086W YRF1-8P0CX22 1796 aa13.98□□□□□ -0.17
CSM1YCR086W IFH1P39520 1085 aa13.97□□□□□ -0.17
CSM1YCR086W RTT106P40161 455 aa13.96□□□□□ -0.17
CSM1YCR086W VPS15P22219 1454 aa13.88□□□□□ -0.19
CSM1YCR086W GEA2P39993 1459 aaKnown RBP13.88□□□□□ -0.19
CSM1YCR086W LTE1P07866 1435 aa13.87□□□□□ -0.19
CSM1YCR086W GEA1P47102 1408 aaPredicted RBP13.86□□□□□ -0.19
CSM1YCR086W MET10P39692 1035 aa13.85□□□□□ -0.19
CSM1YCR086W IRC20Q06554 1556 aa13.8□□□□□ -0.2
CSM1YCR086W SPO14P36126 1683 aa13.8□□□□□ -0.2
CSM1YCR086W PDR12Q02785 1511 aa13.77□□□□□ -0.21
CSM1YCR086W TY3B-GQ99315 1547 aa13.76□□□□□ -0.21
CSM1YCR086W AAD16Q02895 342 aa13.76□□□□□ -0.21
CSM1YCR086W NUP157P40064 1391 aaKnown RBP13.73□□□□□ -0.21
CSM1YCR086W GDB1Q06625 1536 aa13.72□□□□□ -0.21
CSM1YCR086W ITT1Q04638 464 aa13.69□□□□□ -0.22
CSM1YCR086W PRI1P10363 409 aa13.68□□□□□ -0.22
CSM1YCR086W PDR10P51533 1564 aa13.67□□□□□ -0.22
CSM1YCR086W BNI1P41832 1953 aa13.67□□□□□ -0.22
CSM1YCR086W YBT1P32386 1661 aa13.66□□□□□ -0.22
CSM1YCR086W CAT8P39113 1433 aa13.66□□□□□ -0.22
CSM1YCR086W DRS2P39524 1355 aa13.66□□□□□ -0.22
CSM1YCR086W NUP170P38181 1502 aa13.64□□□□□ -0.23
CSM1YCR086W IQG1Q12280 1495 aa13.61□□□□□ -0.23
CSM1YCR086W CKB1P43639 278 aa13.59□□□□□ -0.23
CSM1YCR086W IKI3Q06706 1349 aaKnown RBP13.59□□□□□ -0.23
CSM1YCR086W ARO1P08566 1588 aaKnown RBP13.57□□□□□ -0.24
CSM1YCR086W BUD3P25558 1636 aa13.56□□□□□ -0.24
CSM1YCR086W MMS1Q06211 1407 aa13.51□□□□□ -0.25
CSM1YCR086W YCK3P39962 524 aa13.5□□□□□ -0.25
CSM1YCR086W SSM4P40318 1319 aa13.49□□□□□ -0.25
CSM1YCR086W YSP2Q06681 1438 aa13.48□□□□□ -0.25
CSM1YCR086W SRB8P25648 1427 aa13.44□□□□□ -0.26
CSM1YCR086W DOP1Q03921 1698 aa13.44□□□□□ -0.26
CSM1YCR086W TRM3Q07527 1436 aa13.43□□□□□ -0.26
CSM1YCR086W HAA1Q12753 694 aaKnown RBP13.43□□□□□ -0.26
CSM1YCR086W SEC7P11075 2009 aaKnown RBP13.39□□□□□ -0.27
CSM1YCR086W BNR1P40450 1375 aa13.38□□□□□ -0.27
CSM1YCR086W BUD21Q08492 214 aaPredicted RBP13.33□□□□□ -0.28
CSM1YCR086W CHC1P22137 1653 aaKnown RBP13.33□□□□□ -0.28
CSM1YCR086W DNF2Q12675 1612 aa13.3□□□□□ -0.28
CSM1YCR086W ABP1P15891 592 aaKnown RBP13.27□□□□□ -0.29
CSM1YCR086W YOR093CQ12275 1648 aa13.14□□□□□ -0.31
CSM1YCR086W GCN2P15442 1659 aa13.09□□□□□ -0.31
CSM1YCR086W YAP3P38749 330 aa13.08□□□□□ -0.32
CSM1YCR086W VMR1P38735 1592 aa13.07□□□□□ -0.32
CSM1YCR086W NUP188P52593 1655 aaKnown RBP13.05□□□□□ -0.32
CSM1YCR086W ISW2Q08773 1120 aa13.05□□□□□ -0.32
CSM1YCR086W URN1Q06525 465 aaKnown RBP13.04□□□□□ -0.32
CSM1YCR086W TYS1P36421 394 aaKnown RBP13.02□□□□□ -0.33
CSM1YCR086W IPL1P38991 367 aa13.01□□□□□ -0.33
CSM1YCR086W PDR5P33302 1511 aaKnown RBP13.01□□□□□ -0.33
CSM1YCR086W PDR11P40550 1411 aa13□□□□□ -0.33
CSM1YCR086W MIF2P35201 549 aa13□□□□□ -0.33
CSM1YCR086W IML1P47170 1584 aa12.98□□□□□ -0.33
CSM1YCR086W DNF3Q12674 1656 aa12.97□□□□□ -0.33
CSM1YCR086W RPG1P38249 964 aaKnown RBP12.93□□□□□ -0.34
CSM1YCR086W PAF1P38351 445 aa12.93□□□□□ -0.34
CSM1YCR086W NOP7P53261 605 aaKnown RBP12.9□□□□□ -0.34
CSM1YCR086W BFR2Q06631 534 aaKnown RBP12.88□□□□□ -0.35
CSM1YCR086W RAV1P47104 1357 aa12.87□□□□□ -0.35
CSM1YCR086W MAK10Q02197 733 aa12.87□□□□□ -0.35
CSM1YCR086W TSR3Q12094 313 aaKnown RBP12.84□□□□□ -0.35
CSM1YCR086W RTC1Q08281 1341 aa12.82□□□□□ -0.36
CSM1YCR086W HAP1P0CE41 1502 aa12.78□□□□□ -0.36
CSM1YCR086W NUP192P47054 1683 aa12.73□□□□□ -0.37
CSM1YCR086W TAF5P38129 798 aa12.7□□□□□ -0.38
CSM1YCR086W RAD9P14737 1309 aa12.69□□□□□ -0.38
CSM1YCR086W USO1P25386 1790 aa12.68□□□□□ -0.38
CSM1YCR086W KRE5P22023 1365 aa12.68□□□□□ -0.38
CSM1YCR086W YFR006WP43590 535 aa12.67□□□□□ -0.38
CSM1YCR086W CAB1Q04430 367 aa12.67□□□□□ -0.38
CSM1YCR086W ALD4P46367 519 aaKnown RBP12.65□□□□□ -0.38
CSM1YCR086W BCK1Q01389 1478 aa12.65□□□□□ -0.38
CSM1YCR086W ESL2P36168 1195 aa12.64□□□□□ -0.39
CSM1YCR086W MRX12P47084 519 aa12.64□□□□□ -0.39
CSM1YCR086W ORC1P54784 914 aaPredicted RBP12.64□□□□□ -0.39
CSM1YCR086W RIA1P53893 1110 aa12.63□□□□□ -0.39
CSM1YCR086W TAF8Q03750 510 aa12.58□□□□□ -0.4
CSM1YCR086W CFT1Q06632 1357 aaKnown RBP12.57□□□□□ -0.4
CSM1YCR086W TY1B-NL2Q99337 1749 aaKnown RBP12.57□□□□□ -0.4
CSM1YCR086W KIP3P53086 805 aaKnown RBP12.56□□□□□ -0.4
CSM1YCR086W TY3B-IQ7LHG5 1498 aaKnown RBP12.55□□□□□ -0.4
CSM1YCR086W YMR196WQ04336 1088 aa12.55□□□□□ -0.4
CSM1YCR086W POL5P39985 1022 aaKnown RBP12.54□□□□□ -0.4
CSM1YCR086W THI12P42883 340 aa12.54□□□□□ -0.4
CSM1YCR086W THI5P43534 340 aa12.54□□□□□ -0.4
CSM1YCR086W THI11P47183 340 aa12.54□□□□□ -0.4
CSM1YCR086W THI13Q07748 340 aa12.54□□□□□ -0.4
Retrieved 100 of 5,963 RNA–protein pairs in 196.2 ms