RNA–Protein interactions for RNA: YCR009C

RVS161, Transcript of Amphiphysin-like lipid raft protein, yeastyeast

Gene RVS161, Length 798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RVS161YCR009C RAM2P29703 316 aa9.02□□□□□ -0.97
RVS161YCR009C YEL023CP39992 682 aa9.01□□□□□ -0.97
RVS161YCR009C YDL129WQ07555 291 aa9.01□□□□□ -0.97
RVS161YCR009C GRE2Q12068 342 aaKnown RBP9.01□□□□□ -0.97
RVS161YCR009C SAP30P38429 201 aa8.96□□□□□ -0.98
RVS161YCR009C GUT1P32190 709 aa8.95□□□□□ -0.98
RVS161YCR009C MIF2P35201 549 aa8.95□□□□□ -0.98
RVS161YCR009C CHL1P22516 861 aaPredicted RBP8.94□□□□□ -0.98
RVS161YCR009C PTC3P34221 468 aaKnown RBP8.93□□□□□ -0.98
RVS161YCR009C ATH1P48016 1211 aa8.93□□□□□ -0.98
RVS161YCR009C NOP53Q12080 455 aaKnown RBP8.92□□□□□ -0.98
RVS161YCR009C EDS1P38073 919 aa8.9□□□□□ -0.98
RVS161YCR009C PRE3P38624 215 aa8.89□□□□□ -0.99
RVS161YCR009C COQ8P27697 501 aa8.88□□□□□ -0.99
RVS161YCR009C BCK2P33306 851 aa8.84□□□□□ -0.99
RVS161YCR009C PML39Q03760 334 aa8.81□□□□□ -1
RVS161YCR009C NST1P53935 1240 aa8.8□□□□□ -1
RVS161YCR009C AI4P03878 556 aa8.78□□□□□ -1
RVS161YCR009C MPH3P0CE00 602 aa8.77□□□□□ -1.01
RVS161YCR009C SOL3P38858 249 aa8.75□□□□□ -1.01
RVS161YCR009C ARH1P48360 493 aa8.73□□□□□ -1.01
RVS161YCR009C ELP4Q02884 456 aaKnown RBP8.73□□□□□ -1.01
RVS161YCR009C XDJ1P39102 459 aa8.68□□□□□ -1.02
RVS161YCR009C YGR273CP53329 174 aa8.68□□□□□ -1.02
RVS161YCR009C VRP1P37370 817 aa8.66□□□□□ -1.02
RVS161YCR009C MID1P41821 548 aa8.66□□□□□ -1.02
RVS161YCR009C SPT23P35210 1082 aa8.65□□□□□ -1.02
RVS161YCR009C PEX29Q03370 554 aa8.65□□□□□ -1.02
RVS161YCR009C ILV3P39522 585 aaKnown RBP8.63□□□□□ -1.03
RVS161YCR009C YDR344CQ05510 147 aa8.63□□□□□ -1.03
RVS161YCR009C HAP5Q02516 242 aa8.6□□□□□ -1.03
RVS161YCR009C BNI4P53858 892 aa8.58□□□□□ -1.04
RVS161YCR009C SET1P38827 1080 aaKnown RBP8.56□□□□□ -1.04
RVS161YCR009C YML082WQ04533 649 aaKnown RBP8.55□□□□□ -1.04
RVS161YCR009C MPC54Q08550 464 aa8.54□□□□□ -1.04
RVS161YCR009C SLI15P38283 698 aa8.52□□□□□ -1.05
RVS161YCR009C PTC2P39966 464 aaKnown RBP8.51□□□□□ -1.05
RVS161YCR009C DPL1Q05567 589 aa8.51□□□□□ -1.05
RVS161YCR009C NMA111P53920 997 aa8.5□□□□□ -1.05
RVS161YCR009C KEX1P09620 729 aa8.49□□□□□ -1.05
RVS161YCR009C IFH1P39520 1085 aa8.48□□□□□ -1.05
RVS161YCR009C ISU2Q12056 156 aa8.45□□□□□ -1.06
RVS161YCR009C DPS1P04802 557 aaKnown RBP8.44□□□□□ -1.06
RVS161YCR009C UBP14P38237 781 aaKnown RBP8.43□□□□□ -1.06
RVS161YCR009C RPP1BP10622 106 aaKnown RBP8.42□□□□□ -1.06
RVS161YCR009C YLR326WQ06170 240 aaKnown RBP8.41□□□□□ -1.06
RVS161YCR009C RAD54P32863 898 aa8.37□□□□□ -1.07
RVS161YCR009C VHR2P40041 505 aa8.36□□□□□ -1.07
RVS161YCR009C YPR148CQ06523 435 aa8.36□□□□□ -1.07
RVS161YCR009C PCS60P38137 543 aaKnown RBP RIP-Chip data8.34□□□□□ -1.07not detected
RVS161YCR009C CDC73Q06697 393 aa8.33□□□□□ -1.08
RVS161YCR009C RAM1P22007 431 aa8.31□□□□□ -1.08
RVS161YCR009C KIC1P38692 1080 aa8.29□□□□□ -1.08
RVS161YCR009C YDR090CQ03193 310 aa8.29□□□□□ -1.08
RVS161YCR009C SAS4Q04003 481 aa8.29□□□□□ -1.08
RVS161YCR009C REF2P42073 533 aaPredicted RBP8.27□□□□□ -1.09
RVS161YCR009C YPR015CQ12531 247 aa8.27□□□□□ -1.09
RVS161YCR009C GYP1Q08484 637 aa8.25□□□□□ -1.09
RVS161YCR009C CSC1Q06538 782 aa8.23□□□□□ -1.09
RVS161YCR009C MAK21Q12176 1025 aaKnown RBP8.22□□□□□ -1.09
RVS161YCR009C PEX21P50091 288 aa8.21□□□□□ -1.1
RVS161YCR009C TFB4Q12004 338 aa8.21□□□□□ -1.1
RVS161YCR009C PDR1P12383 1068 aa8.2□□□□□ -1.1
RVS161YCR009C GAP1P19145 602 aaPredicted RBP8.2□□□□□ -1.1
RVS161YCR009C AMS1P22855 1083 aa8.17□□□□□ -1.1
RVS161YCR009C VPS70P47161 811 aa8.17□□□□□ -1.1
RVS161YCR009C SRC1Q03707 834 aa8.17□□□□□ -1.1
RVS161YCR009C COX6P00427 148 aa8.16□□□□□ -1.1
RVS161YCR009C MRF1P30775 413 aaPredicted RBP8.16□□□□□ -1.1
RVS161YCR009C RAS1P01119 309 aa8.15□□□□□ -1.1
RVS161YCR009C YRR1Q12172 810 aa8.14□□□□□ -1.11
RVS161YCR009C ORC6P38826 435 aa8.13□□□□□ -1.11
RVS161YCR009C PRT1P06103 763 aaKnown RBP8.12□□□□□ -1.11
RVS161YCR009C YEL077CQ3E7X8 1277 aa8.12□□□□□ -1.11
RVS161YCR009C BUD20Q08004 166 aaPredicted RBP8.11□□□□□ -1.11
RVS161YCR009C CKB1P43639 278 aa8.09□□□□□ -1.11
RVS161YCR009C TUM1Q08686 304 aaKnown RBP8.09□□□□□ -1.11
RVS161YCR009C NPL4P33755 580 aa8.08□□□□□ -1.12
RVS161YCR009C SDH2P21801 266 aa8.06□□□□□ -1.12
RVS161YCR009C NUD1P32336 851 aa8.06□□□□□ -1.12
RVS161YCR009C TRK1P12685 1235 aa8.05□□□□□ -1.12
RVS161YCR009C MVP1P40959 511 aaKnown RBP8.04□□□□□ -1.12
RVS161YCR009C STR2P47164 639 aa8.04□□□□□ -1.12
RVS161YCR009C ISM1P48526 1002 aa8.04□□□□□ -1.12
RVS161YCR009C ERG12P07277 443 aa8.02□□□□□ -1.13
RVS161YCR009C RGR1P19263 1082 aa8□□□□□ -1.13
RVS161YCR009C SAS10Q12136 610 aaPredicted RBP8□□□□□ -1.13
RVS161YCR009C GCD11P32481 527 aaKnown RBP7.98□□□□□ -1.13
RVS161YCR009C YPR109WQ06104 294 aa7.98□□□□□ -1.13
RVS161YCR009C PBS2P08018 668 aa7.97□□□□□ -1.13
RVS161YCR009C DMA1P38823 416 aa7.97□□□□□ -1.13
RVS161YCR009C SPT16P32558 1035 aaKnown RBP7.96□□□□□ -1.14
RVS161YCR009C PAT1P25644 796 aaKnown RBP7.95□□□□□ -1.14
RVS161YCR009C PSE1P32337 1089 aaKnown RBP7.95□□□□□ -1.14
RVS161YCR009C TY1A-DR4O74302 440 aa7.93□□□□□ -1.14
RVS161YCR009C TY1A-HP0C2I4 478 aaKnown RBP7.93□□□□□ -1.14
RVS161YCR009C TY1A-AP0CX57 440 aa7.93□□□□□ -1.14
RVS161YCR009C TY1A-PR1P0CX58 440 aa7.93□□□□□ -1.14
RVS161YCR009C TY1A-ORP0CX59 440 aa7.93□□□□□ -1.14
RVS161YCR009C TY1A-PR2P0CX60 440 aa7.93□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 30.1 ms