RNA–Protein interactions for RNA: YCL048W-A

YCL048W-A, Transcript of Putative protein of unknown function, yeastyeast

Gene YCL048W-A, Length 240 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCL048W-AYCL048W-A TAF7Q05021 590 aa18.2■□□□□ 0.5
YCL048W-AYCL048W-A SAS10Q12136 610 aaPredicted RBP18.18■□□□□ 0.5
YCL048W-AYCL048W-A RPO21P04050 1733 aaKnown RBP18.17■□□□□ 0.5
YCL048W-AYCL048W-A SNT2P53127 1403 aa18.16■□□□□ 0.5
YCL048W-AYCL048W-A ULS1Q08562 1619 aa18.12■□□□□ 0.49
YCL048W-AYCL048W-A PDR15Q04182 1529 aaKnown RBP18.12■□□□□ 0.49
YCL048W-AYCL048W-A NUP159P40477 1460 aa18.1■□□□□ 0.49
YCL048W-AYCL048W-A GEA2P39993 1459 aaKnown RBP18.01■□□□□ 0.47
YCL048W-AYCL048W-A YRF1-1P0CX20 1796 aa17.98■□□□□ 0.47
YCL048W-AYCL048W-A YRF1-5P0CX21 1796 aa17.98■□□□□ 0.47
YCL048W-AYCL048W-A YRF1-8P0CX22 1796 aa17.98■□□□□ 0.47
YCL048W-AYCL048W-A GEA1P47102 1408 aaPredicted RBP17.9■□□□□ 0.46
YCL048W-AYCL048W-A IRC20Q06554 1556 aa17.9■□□□□ 0.46
YCL048W-AYCL048W-A RTT106P40161 455 aa17.89■□□□□ 0.45
YCL048W-AYCL048W-A VPS15P22219 1454 aa17.88■□□□□ 0.45
YCL048W-AYCL048W-A LTE1P07866 1435 aa17.88■□□□□ 0.45
YCL048W-AYCL048W-A PDR12Q02785 1511 aa17.87■□□□□ 0.45
YCL048W-AYCL048W-A MET10P39692 1035 aa17.8■□□□□ 0.44
YCL048W-AYCL048W-A IFH1P39520 1085 aa17.79■□□□□ 0.44
YCL048W-AYCL048W-A SPO14P36126 1683 aa17.78■□□□□ 0.44
YCL048W-AYCL048W-A TY3B-GQ99315 1547 aa17.77■□□□□ 0.43
YCL048W-AYCL048W-A CAT8P39113 1433 aa17.76■□□□□ 0.43
YCL048W-AYCL048W-A GDB1Q06625 1536 aa17.76■□□□□ 0.43
YCL048W-AYCL048W-A YBT1P32386 1661 aa17.74■□□□□ 0.43
YCL048W-AYCL048W-A PDR10P51533 1564 aa17.67■□□□□ 0.42
YCL048W-AYCL048W-A NUP170P38181 1502 aa17.64■□□□□ 0.41
YCL048W-AYCL048W-A IKI3Q06706 1349 aaKnown RBP17.64■□□□□ 0.41
YCL048W-AYCL048W-A NUP157P40064 1391 aaKnown RBP17.63■□□□□ 0.41
YCL048W-AYCL048W-A BUD3P25558 1636 aa17.58■□□□□ 0.41
YCL048W-AYCL048W-A IQG1Q12280 1495 aa17.56■□□□□ 0.4
YCL048W-AYCL048W-A ARO1P08566 1588 aaKnown RBP17.55■□□□□ 0.4
YCL048W-AYCL048W-A DRS2P39524 1355 aa17.54■□□□□ 0.4
YCL048W-AYCL048W-A BNI1P41832 1953 aa17.51■□□□□ 0.39
YCL048W-AYCL048W-A TRM3Q07527 1436 aa17.46■□□□□ 0.39
YCL048W-AYCL048W-A DOP1Q03921 1698 aa17.44■□□□□ 0.38
YCL048W-AYCL048W-A SRB8P25648 1427 aa17.41■□□□□ 0.38
YCL048W-AYCL048W-A ITT1Q04638 464 aa17.37■□□□□ 0.37
YCL048W-AYCL048W-A YSP2Q06681 1438 aa17.36■□□□□ 0.37
YCL048W-AYCL048W-A CKB1P43639 278 aa17.33■□□□□ 0.36
YCL048W-AYCL048W-A SSM4P40318 1319 aa17.32■□□□□ 0.36
YCL048W-AYCL048W-A CHC1P22137 1653 aaKnown RBP17.31■□□□□ 0.36
YCL048W-AYCL048W-A MMS1Q06211 1407 aa17.3■□□□□ 0.36
YCL048W-AYCL048W-A SEC7P11075 2009 aaKnown RBP17.3■□□□□ 0.36
YCL048W-AYCL048W-A BNR1P40450 1375 aa17.22■□□□□ 0.35
YCL048W-AYCL048W-A DNF2Q12675 1612 aa17.14■□□□□ 0.33
YCL048W-AYCL048W-A BUD21Q08492 214 aaPredicted RBP17.13■□□□□ 0.33
YCL048W-AYCL048W-A GCN2P15442 1659 aa17.1■□□□□ 0.33
YCL048W-AYCL048W-A YOR093CQ12275 1648 aa16.96■□□□□ 0.3
YCL048W-AYCL048W-A NUP188P52593 1655 aaKnown RBP16.94■□□□□ 0.3
YCL048W-AYCL048W-A PDR5P33302 1511 aaKnown RBP16.92■□□□□ 0.3
YCL048W-AYCL048W-A VMR1P38735 1592 aa16.87■□□□□ 0.29
YCL048W-AYCL048W-A URN1Q06525 465 aaKnown RBP16.86■□□□□ 0.29
YCL048W-AYCL048W-A IML1P47170 1584 aa16.81■□□□□ 0.28
YCL048W-AYCL048W-A ABP1P15891 592 aaKnown RBP16.8■□□□□ 0.28
YCL048W-AYCL048W-A YAP3P38749 330 aa16.78■□□□□ 0.28
YCL048W-AYCL048W-A HAP1P0CE41 1502 aa16.77■□□□□ 0.28
YCL048W-AYCL048W-A DNF3Q12674 1656 aa16.77■□□□□ 0.28
YCL048W-AYCL048W-A PAF1P38351 445 aa16.71■□□□□ 0.27
YCL048W-AYCL048W-A IPL1P38991 367 aa16.7■□□□□ 0.26
YCL048W-AYCL048W-A RAV1P47104 1357 aa16.66■□□□□ 0.26
YCL048W-AYCL048W-A NOP7P53261 605 aaKnown RBP16.66■□□□□ 0.26
YCL048W-AYCL048W-A PDR11P40550 1411 aa16.65■□□□□ 0.26
YCL048W-AYCL048W-A BFR2Q06631 534 aaKnown RBP16.62■□□□□ 0.25
YCL048W-AYCL048W-A TYS1P36421 394 aaKnown RBP16.57■□□□□ 0.24
YCL048W-AYCL048W-A RTC1Q08281 1341 aa16.56■□□□□ 0.24
YCL048W-AYCL048W-A MIF2P35201 549 aa16.52■□□□□ 0.24
YCL048W-AYCL048W-A MAK10Q02197 733 aa16.46■□□□□ 0.23
YCL048W-AYCL048W-A NUP192P47054 1683 aa16.45■□□□□ 0.22
YCL048W-AYCL048W-A BCK1Q01389 1478 aa16.37■□□□□ 0.21
YCL048W-AYCL048W-A TY1B-NL2Q99337 1749 aaKnown RBP16.37■□□□□ 0.21
YCL048W-AYCL048W-A ESL2P36168 1195 aa16.34■□□□□ 0.21
YCL048W-AYCL048W-A TY3B-IQ7LHG5 1498 aaKnown RBP16.34■□□□□ 0.21
YCL048W-AYCL048W-A USO1P25386 1790 aa16.28■□□□□ 0.2
YCL048W-AYCL048W-A ALD4P46367 519 aaKnown RBP16.27■□□□□ 0.2
YCL048W-AYCL048W-A POL5P39985 1022 aaKnown RBP16.25■□□□□ 0.19
YCL048W-AYCL048W-A CFT1Q06632 1357 aaKnown RBP16.25■□□□□ 0.19
YCL048W-AYCL048W-A TAF5P38129 798 aa16.24■□□□□ 0.19
YCL048W-AYCL048W-A RAD9P14737 1309 aa16.23■□□□□ 0.19
YCL048W-AYCL048W-A MRX12P47084 519 aa16.2■□□□□ 0.18
YCL048W-AYCL048W-A KRE5P22023 1365 aa16.19■□□□□ 0.18
YCL048W-AYCL048W-A NAP1P25293 417 aaKnown RBP16.18■□□□□ 0.18
YCL048W-AYCL048W-A SCT1P32784 759 aa16.18■□□□□ 0.18
YCL048W-AYCL048W-A YMR196WQ04336 1088 aa16.16■□□□□ 0.18
YCL048W-AYCL048W-A CAB1Q04430 367 aa16.16■□□□□ 0.18
YCL048W-AYCL048W-A YLR419WQ06698 1435 aaKnown RBP16.14■□□□□ 0.17
YCL048W-AYCL048W-A KIP3P53086 805 aaKnown RBP16.11■□□□□ 0.17
YCL048W-AYCL048W-A RIA1P53893 1110 aa16.11■□□□□ 0.17
YCL048W-AYCL048W-A TAF8Q03750 510 aa16.1■□□□□ 0.17
YCL048W-AYCL048W-A SPE2P21182 396 aa16.07■□□□□ 0.16
YCL048W-AYCL048W-A MHP1P43638 1398 aa16.05■□□□□ 0.16
YCL048W-AYCL048W-A YNR029CP53729 429 aaKnown RBP16.03■□□□□ 0.16
YCL048W-AYCL048W-A YFR006WP43590 535 aa15.99■□□□□ 0.15
YCL048W-AYCL048W-A ORC1P54784 914 aaPredicted RBP15.99■□□□□ 0.15
YCL048W-AYCL048W-A THI12P42883 340 aa15.97■□□□□ 0.15
YCL048W-AYCL048W-A THI5P43534 340 aa15.97■□□□□ 0.15
YCL048W-AYCL048W-A THI11P47183 340 aa15.97■□□□□ 0.15
YCL048W-AYCL048W-A THI13Q07748 340 aa15.97■□□□□ 0.15
YCL048W-AYCL048W-A PSK1P31374 1356 aa15.91■□□□□ 0.14
YCL048W-AYCL048W-A SEC3P33332 1336 aaKnown RBP15.91■□□□□ 0.14
YCL048W-AYCL048W-A CHZ1P40019 153 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms