RNA–Protein interactions for RNA: YBR231C

SWC5, Transcript of Component of the SWR1 complex, yeastyeast

Gene SWC5, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWC5YBR231C STH1P32597 1359 aa16.61■□□□□ 0.25
SWC5YBR231C NUP159P40477 1460 aa16.57■□□□□ 0.24
SWC5YBR231C SNT2P53127 1403 aa16.55■□□□□ 0.24
SWC5YBR231C ULS1Q08562 1619 aa16.52■□□□□ 0.24
SWC5YBR231C TAF7Q05021 590 aa16.52■□□□□ 0.24
SWC5YBR231C PDR15Q04182 1529 aaKnown RBP16.5■□□□□ 0.23
SWC5YBR231C SAS10Q12136 610 aaPredicted RBP16.5■□□□□ 0.23
SWC5YBR231C YRF1-1P0CX20 1796 aa16.49■□□□□ 0.23
SWC5YBR231C YRF1-5P0CX21 1796 aa16.49■□□□□ 0.23
SWC5YBR231C YRF1-8P0CX22 1796 aa16.49■□□□□ 0.23
SWC5YBR231C GEA2P39993 1459 aaKnown RBP16.42■□□□□ 0.22
SWC5YBR231C LTE1P07866 1435 aa16.42■□□□□ 0.22
SWC5YBR231C VPS15P22219 1454 aa16.39■□□□□ 0.21
SWC5YBR231C IRC20Q06554 1556 aa16.34■□□□□ 0.21
SWC5YBR231C PDR12Q02785 1511 aa16.33■□□□□ 0.2
SWC5YBR231C RTT106P40161 455 aa16.31■□□□□ 0.2
SWC5YBR231C GEA1P47102 1408 aaPredicted RBP16.28■□□□□ 0.2
SWC5YBR231C SPO14P36126 1683 aa16.27■□□□□ 0.19
SWC5YBR231C MET10P39692 1035 aa16.24■□□□□ 0.19
SWC5YBR231C GDB1Q06625 1536 aa16.23■□□□□ 0.19
SWC5YBR231C IFH1P39520 1085 aa16.18■□□□□ 0.18
SWC5YBR231C TY3B-GQ99315 1547 aa16.18■□□□□ 0.18
SWC5YBR231C CAT8P39113 1433 aa16.17■□□□□ 0.18
SWC5YBR231C YBT1P32386 1661 aa16.17■□□□□ 0.18
SWC5YBR231C NUP170P38181 1502 aa16.13■□□□□ 0.17
SWC5YBR231C PDR10P51533 1564 aa16.13■□□□□ 0.17
SWC5YBR231C BNI1P41832 1953 aa16.12■□□□□ 0.17
SWC5YBR231C NUP157P40064 1391 aaKnown RBP16.1■□□□□ 0.17
SWC5YBR231C DRS2P39524 1355 aa16.09■□□□□ 0.17
SWC5YBR231C BUD3P25558 1636 aa16.06■□□□□ 0.16
SWC5YBR231C IQG1Q12280 1495 aa16.06■□□□□ 0.16
SWC5YBR231C ARO1P08566 1588 aaKnown RBP15.99■□□□□ 0.15
SWC5YBR231C TRM3Q07527 1436 aa15.97■□□□□ 0.15
SWC5YBR231C ITT1Q04638 464 aa15.97■□□□□ 0.15
SWC5YBR231C DOP1Q03921 1698 aa15.97■□□□□ 0.15
SWC5YBR231C IKI3Q06706 1349 aaKnown RBP15.95■□□□□ 0.14
SWC5YBR231C MMS1Q06211 1407 aa15.87■□□□□ 0.13
SWC5YBR231C CHC1P22137 1653 aaKnown RBP15.85■□□□□ 0.13
SWC5YBR231C SRB8P25648 1427 aa15.85■□□□□ 0.13
SWC5YBR231C YSP2Q06681 1438 aa15.83■□□□□ 0.12
SWC5YBR231C SEC7P11075 2009 aaKnown RBP15.82■□□□□ 0.12
SWC5YBR231C CKB1P43639 278 aa15.79■□□□□ 0.12
SWC5YBR231C DNF2Q12675 1612 aa15.76■□□□□ 0.11
SWC5YBR231C BNR1P40450 1375 aa15.71■□□□□ 0.11
SWC5YBR231C SSM4P40318 1319 aa15.69■□□□□ 0.1
SWC5YBR231C BUD21Q08492 214 aaPredicted RBP15.57■□□□□ 0.08
SWC5YBR231C YOR093CQ12275 1648 aa15.54■□□□□ 0.08
SWC5YBR231C GCN2P15442 1659 aa15.54■□□□□ 0.08
SWC5YBR231C ABP1P15891 592 aaKnown RBP15.47■□□□□ 0.07
SWC5YBR231C NUP188P52593 1655 aaKnown RBP15.45■□□□□ 0.06
SWC5YBR231C PDR5P33302 1511 aaKnown RBP15.41■□□□□ 0.06
SWC5YBR231C VMR1P38735 1592 aa15.4■□□□□ 0.06
SWC5YBR231C DNF3Q12674 1656 aa15.38■□□□□ 0.05
SWC5YBR231C URN1Q06525 465 aaKnown RBP15.38■□□□□ 0.05
SWC5YBR231C YAP3P38749 330 aa15.34■□□□□ 0.05
SWC5YBR231C HAP1P0CE41 1502 aa15.33■□□□□ 0.04
SWC5YBR231C IML1P47170 1584 aa15.32■□□□□ 0.04
SWC5YBR231C MIF2P35201 549 aa15.29■□□□□ 0.04
SWC5YBR231C IPL1P38991 367 aa15.23■□□□□ 0.03
SWC5YBR231C PDR11P40550 1411 aa15.17■□□□□ 0.02
SWC5YBR231C PAF1P38351 445 aa15.16■□□□□ 0.02
SWC5YBR231C RAV1P47104 1357 aa15.14■□□□□ 0.01
SWC5YBR231C TYS1P36421 394 aaKnown RBP15.12■□□□□ 0.01
SWC5YBR231C NOP7P53261 605 aaKnown RBP15.09■□□□□ 0.01
SWC5YBR231C BFR2Q06631 534 aaKnown RBP15.08■□□□□ 0
SWC5YBR231C MAK10Q02197 733 aa15.07■□□□□ 0
SWC5YBR231C RTC1Q08281 1341 aa15.04■□□□□ -0
SWC5YBR231C TY1B-NL2Q99337 1749 aaKnown RBP14.99□□□□□ -0.01
SWC5YBR231C NUP192P47054 1683 aa14.97□□□□□ -0.01
SWC5YBR231C USO1P25386 1790 aa14.96□□□□□ -0.02
SWC5YBR231C BCK1Q01389 1478 aa14.92□□□□□ -0.02
SWC5YBR231C CFT1Q06632 1357 aaKnown RBP14.83□□□□□ -0.04
SWC5YBR231C ESL2P36168 1195 aa14.81□□□□□ -0.04
SWC5YBR231C ALD4P46367 519 aaKnown RBP14.8□□□□□ -0.04
SWC5YBR231C TY3B-IQ7LHG5 1498 aaKnown RBP14.8□□□□□ -0.04
SWC5YBR231C YFR006WP43590 535 aa14.79□□□□□ -0.04
SWC5YBR231C YMR196WQ04336 1088 aa14.79□□□□□ -0.04
SWC5YBR231C KRE5P22023 1365 aa14.78□□□□□ -0.04
SWC5YBR231C MRX12P47084 519 aa14.78□□□□□ -0.04
SWC5YBR231C RAD9P14737 1309 aa14.77□□□□□ -0.04
SWC5YBR231C TAF5P38129 798 aa14.73□□□□□ -0.05
SWC5YBR231C CAB1Q04430 367 aa14.72□□□□□ -0.05
SWC5YBR231C RIA1P53893 1110 aa14.71□□□□□ -0.05
SWC5YBR231C NAP1P25293 417 aaKnown RBP14.7□□□□□ -0.06
SWC5YBR231C YNR029CP53729 429 aaKnown RBP14.64□□□□□ -0.07
SWC5YBR231C YLR419WQ06698 1435 aaKnown RBP14.64□□□□□ -0.07
SWC5YBR231C SCT1P32784 759 aa14.63□□□□□ -0.07
SWC5YBR231C THI12P42883 340 aa14.63□□□□□ -0.07
SWC5YBR231C THI5P43534 340 aa14.63□□□□□ -0.07
SWC5YBR231C THI11P47183 340 aa14.63□□□□□ -0.07
SWC5YBR231C TAF8Q03750 510 aa14.63□□□□□ -0.07
SWC5YBR231C THI13Q07748 340 aa14.63□□□□□ -0.07
SWC5YBR231C POL5P39985 1022 aaKnown RBP14.62□□□□□ -0.07
SWC5YBR231C KIP3P53086 805 aaKnown RBP14.61□□□□□ -0.07
SWC5YBR231C SPE2P21182 396 aa14.58□□□□□ -0.08
SWC5YBR231C MHP1P43638 1398 aa14.49□□□□□ -0.09
SWC5YBR231C PSK1P31374 1356 aa14.48□□□□□ -0.09
SWC5YBR231C ORC1P54784 914 aaPredicted RBP14.48□□□□□ -0.09
SWC5YBR231C CPS1P27614 576 aa14.45□□□□□ -0.1
SWC5YBR231C RCM1P53972 490 aa14.45□□□□□ -0.1
Retrieved 100 of 5,963 RNA–protein pairs in 52.6 ms