RNA–Protein interactions for RNA: YBR217W

ATG12, Transcript of Ubiquitin-like modifier involved in autophagy and the Cvt pathway, yeast

Gene ATG12, Length 561 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG12	YBR217W	LTE1	P07866	1435 aa		9.28	□□□□□ -0.92
ATG12	YBR217W	MYO4	P32492	1471 aa		9.28	□□□□□ -0.92
ATG12	YBR217W	NTE1	Q04958	1679 aa		9.27	□□□□□ -0.93
ATG12	YBR217W	RPO21	P04050	1733 aa	Known RBP	9.26	□□□□□ -0.93
ATG12	YBR217W	BNI1	P41832	1953 aa		9.23	□□□□□ -0.93
ATG12	YBR217W	GEA2	P39993	1459 aa	Known RBP	9.21	□□□□□ -0.94
ATG12	YBR217W	SNQ2	P32568	1501 aa	Known RBP	9.21	□□□□□ -0.94
ATG12	YBR217W	ITT1	Q04638	464 aa		9.2	□□□□□ -0.94
ATG12	YBR217W	VPS15	P22219	1454 aa		9.19	□□□□□ -0.94
ATG12	YBR217W	STH1	P32597	1359 aa		9.17	□□□□□ -0.94
ATG12	YBR217W	SNT2	P53127	1403 aa		9.16	□□□□□ -0.94
ATG12	YBR217W	SAS10	Q12136	610 aa	Predicted RBP	9.16	□□□□□ -0.94
ATG12	YBR217W	MLP2	P40457	1679 aa		9.13	□□□□□ -0.95
ATG12	YBR217W	RTT106	P40161	455 aa		9.12	□□□□□ -0.95
ATG12	YBR217W	MET10	P39692	1035 aa		9.11	□□□□□ -0.95
ATG12	YBR217W	DRS2	P39524	1355 aa		9.11	□□□□□ -0.95
ATG12	YBR217W	ULS1	Q08562	1619 aa		9.1	□□□□□ -0.95
ATG12	YBR217W	SPO14	P36126	1683 aa		9.1	□□□□□ -0.95
ATG12	YBR217W	PDR15	Q04182	1529 aa	Known RBP	9.07	□□□□□ -0.96
ATG12	YBR217W	MMS1	Q06211	1407 aa		9.06	□□□□□ -0.96
ATG12	YBR217W	PRY3	P47033	881 aa		9.04	□□□□□ -0.96
ATG12	YBR217W	IFH1	P39520	1085 aa		9.03	□□□□□ -0.96
ATG12	YBR217W	NUP170	P38181	1502 aa		9.03	□□□□□ -0.96
ATG12	YBR217W	PDR12	Q02785	1511 aa		9.03	□□□□□ -0.96
ATG12	YBR217W	TAF7	Q05021	590 aa		9.02	□□□□□ -0.97
ATG12	YBR217W	IRC20	Q06554	1556 aa		9	□□□□□ -0.97
ATG12	YBR217W	ABP1	P15891	592 aa	Known RBP	9	□□□□□ -0.97
ATG12	YBR217W	GDB1	Q06625	1536 aa		9	□□□□□ -0.97
ATG12	YBR217W	NUP157	P40064	1391 aa	Known RBP	8.99	□□□□□ -0.97
ATG12	YBR217W	MIF2	P35201	549 aa		8.98	□□□□□ -0.97
ATG12	YBR217W	IQG1	Q12280	1495 aa		8.95	□□□□□ -0.98
ATG12	YBR217W	DOP1	Q03921	1698 aa		8.94	□□□□□ -0.98
ATG12	YBR217W	GEA1	P47102	1408 aa	Predicted RBP	8.93	□□□□□ -0.98
ATG12	YBR217W	PDR10	P51533	1564 aa		8.93	□□□□□ -0.98
ATG12	YBR217W	DNF2	Q12675	1612 aa		8.93	□□□□□ -0.98
ATG12	YBR217W	TY3B-G	Q99315	1547 aa		8.89	□□□□□ -0.99
ATG12	YBR217W	YBT1	P32386	1661 aa		8.88	□□□□□ -0.99
ATG12	YBR217W	BUD3	P25558	1636 aa		8.88	□□□□□ -0.99
ATG12	YBR217W	SEC7	P11075	2009 aa	Known RBP	8.87	□□□□□ -0.99
ATG12	YBR217W	CAT8	P39113	1433 aa		8.86	□□□□□ -0.99
ATG12	YBR217W	TRM3	Q07527	1436 aa		8.85	□□□□□ -0.99
ATG12	YBR217W	CKB1	P43639	278 aa		8.84	□□□□□ -0.99
ATG12	YBR217W	ARO1	P08566	1588 aa	Known RBP	8.82	□□□□□ -1
ATG12	YBR217W	CHC1	P22137	1653 aa	Known RBP	8.8	□□□□□ -1
ATG12	YBR217W	YSP2	Q06681	1438 aa		8.78	□□□□□ -1
ATG12	YBR217W	BNR1	P40450	1375 aa		8.73	□□□□□ -1.01
ATG12	YBR217W	YOR093C	Q12275	1648 aa		8.72	□□□□□ -1.01
ATG12	YBR217W	YFR006W	P43590	535 aa		8.72	□□□□□ -1.01
ATG12	YBR217W	SRB8	P25648	1427 aa		8.68	□□□□□ -1.02
ATG12	YBR217W	YAP3	P38749	330 aa		8.66	□□□□□ -1.02
ATG12	YBR217W	DNF3	Q12674	1656 aa		8.65	□□□□□ -1.03
ATG12	YBR217W	BUD21	Q08492	214 aa	Predicted RBP	8.63	□□□□□ -1.03
ATG12	YBR217W	IKI3	Q06706	1349 aa	Known RBP	8.61	□□□□□ -1.03
ATG12	YBR217W	URN1	Q06525	465 aa	Known RBP	8.59	□□□□□ -1.03
ATG12	YBR217W	SSM4	P40318	1319 aa		8.56	□□□□□ -1.04
ATG12	YBR217W	MAK10	Q02197	733 aa		8.55	□□□□□ -1.04
ATG12	YBR217W	NUP188	P52593	1655 aa	Known RBP	8.54	□□□□□ -1.04
ATG12	YBR217W	IPL1	P38991	367 aa		8.53	□□□□□ -1.04
ATG12	YBR217W	TYS1	P36421	394 aa	Known RBP	8.52	□□□□□ -1.05
ATG12	YBR217W	USO1	P25386	1790 aa		8.51	□□□□□ -1.05
ATG12	YBR217W	VMR1	P38735	1592 aa		8.51	□□□□□ -1.05
ATG12	YBR217W	PDR5	P33302	1511 aa	Known RBP	8.46	□□□□□ -1.05
ATG12	YBR217W	YCK3	P39962	524 aa		8.46	□□□□□ -1.06
ATG12	YBR217W	IML1	P47170	1584 aa		8.46	□□□□□ -1.06
ATG12	YBR217W	GCN2	P15442	1659 aa		8.43	□□□□□ -1.06
ATG12	YBR217W	PDR11	P40550	1411 aa		8.41	□□□□□ -1.06
ATG12	YBR217W	HAP1	P0CE41	1502 aa		8.4	□□□□□ -1.06
ATG12	YBR217W	AAD16	Q02895	342 aa		8.38	□□□□□ -1.07
ATG12	YBR217W	HAA1	Q12753	694 aa	Known RBP	8.38	□□□□□ -1.07
ATG12	YBR217W	TY1B-NL2	Q99337	1749 aa	Known RBP	8.35	□□□□□ -1.07
ATG12	YBR217W	THI12	P42883	340 aa		8.34	□□□□□ -1.07
ATG12	YBR217W	THI5	P43534	340 aa		8.34	□□□□□ -1.07
ATG12	YBR217W	THI11	P47183	340 aa		8.34	□□□□□ -1.07
ATG12	YBR217W	YMR196W	Q04336	1088 aa		8.34	□□□□□ -1.07
ATG12	YBR217W	THI13	Q07748	340 aa		8.34	□□□□□ -1.07
ATG12	YBR217W	PAF1	P38351	445 aa		8.31	□□□□□ -1.08
ATG12	YBR217W	KRE5	P22023	1365 aa		8.29	□□□□□ -1.08
ATG12	YBR217W	RAV1	P47104	1357 aa		8.28	□□□□□ -1.08
ATG12	YBR217W	RIA1	P53893	1110 aa		8.28	□□□□□ -1.08
ATG12	YBR217W	MRX12	P47084	519 aa		8.27	□□□□□ -1.09
ATG12	YBR217W	PRI1	P10363	409 aa		8.26	□□□□□ -1.09
ATG12	YBR217W	BFR2	Q06631	534 aa	Known RBP	8.26	□□□□□ -1.09
ATG12	YBR217W	NOP7	P53261	605 aa	Known RBP	8.24	□□□□□ -1.09
ATG12	YBR217W	CAB1	Q04430	367 aa		8.24	□□□□□ -1.09
ATG12	YBR217W	RTC1	Q08281	1341 aa		8.24	□□□□□ -1.09
ATG12	YBR217W	NUP192	P47054	1683 aa		8.24	□□□□□ -1.09
ATG12	YBR217W	BCK1	Q01389	1478 aa		8.23	□□□□□ -1.09
ATG12	YBR217W	RAD9	P14737	1309 aa		8.23	□□□□□ -1.09
ATG12	YBR217W	CFT1	Q06632	1357 aa	Known RBP	8.22	□□□□□ -1.09
ATG12	YBR217W	ALD4	P46367	519 aa	Known RBP	8.22	□□□□□ -1.09
ATG12	YBR217W	YNR029C	P53729	429 aa	Known RBP	8.21	□□□□□ -1.1
ATG12	YBR217W	TAF5	P38129	798 aa		8.15	□□□□□ -1.1
ATG12	YBR217W	TY3B-I	Q7LHG5	1498 aa	Known RBP	8.13	□□□□□ -1.11
ATG12	YBR217W	ESL2	P36168	1195 aa		8.12	□□□□□ -1.11
ATG12	YBR217W	PTP3	P40048	928 aa		8.12	□□□□□ -1.11
ATG12	YBR217W	TAF8	Q03750	510 aa		8.12	□□□□□ -1.11
ATG12	YBR217W	APP1	P53933	587 aa		8.1	□□□□□ -1.11
ATG12	YBR217W	YAH1	Q12184	172 aa	Known RBP	8.1	□□□□□ -1.11
ATG12	YBR217W	NAP1	P25293	417 aa	Known RBP	8.08	□□□□□ -1.12
ATG12	YBR217W	RCM1	P53972	490 aa		8.07	□□□□□ -1.12

Retrieved 100 of 5,963 RNA–protein pairs in 32.9 ms