RNA–Protein interactions for RNA: YBR041W

FAT1, Transcript of Very long chain fatty acyl-CoA synthetase and fatty acid transporter, yeastyeast

Gene FAT1, Length 2,010 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FAT1YBR041W VTH2P40890 1549 aa5.62□□□□□ -1.51
FAT1YBR041W STH1P32597 1359 aa5.59□□□□□ -1.51
FAT1YBR041W IKI3Q06706 1349 aaKnown RBP5.59□□□□□ -1.51
FAT1YBR041W TAF7Q05021 590 aa5.59□□□□□ -1.51
FAT1YBR041W TSC11P40061 1430 aa5.59□□□□□ -1.51
FAT1YBR041W SNT2P53127 1403 aa5.59□□□□□ -1.51
FAT1YBR041W TY3B-GQ99315 1547 aa5.59□□□□□ -1.52
FAT1YBR041W PAN1P32521 1480 aa5.58□□□□□ -1.52
FAT1YBR041W ESC1Q03661 1658 aaKnown RBP5.58□□□□□ -1.52
FAT1YBR041W GEA1P47102 1408 aaPredicted RBP5.58□□□□□ -1.52
FAT1YBR041W RPA190P10964 1664 aaKnown RBP5.57□□□□□ -1.52
FAT1YBR041W NTE1Q04958 1679 aa5.57□□□□□ -1.52
FAT1YBR041W ISW2Q08773 1120 aa5.57□□□□□ -1.52
FAT1YBR041W RPO21P04050 1733 aaKnown RBP5.57□□□□□ -1.52
FAT1YBR041W YBT1P32386 1661 aa5.57□□□□□ -1.52
FAT1YBR041W IRC20Q06554 1556 aa5.57□□□□□ -1.52
FAT1YBR041W RPG1P38249 964 aaKnown RBP5.56□□□□□ -1.52
FAT1YBR041W SAS10Q12136 610 aaPredicted RBP5.56□□□□□ -1.52
FAT1YBR041W HAA1Q12753 694 aaKnown RBP5.52□□□□□ -1.53
FAT1YBR041W DNF1P32660 1571 aa5.51□□□□□ -1.53
FAT1YBR041W GEA2P39993 1459 aaKnown RBP5.51□□□□□ -1.53
FAT1YBR041W RSE1Q04693 1361 aaKnown RBP5.51□□□□□ -1.53
FAT1YBR041W PDR10P51533 1564 aa5.5□□□□□ -1.53
FAT1YBR041W SSM4P40318 1319 aa5.5□□□□□ -1.53
FAT1YBR041W CAT8P39113 1433 aa5.48□□□□□ -1.53
FAT1YBR041W TSR3Q12094 313 aaKnown RBP5.47□□□□□ -1.53
FAT1YBR041W PDR12Q02785 1511 aa5.46□□□□□ -1.53
FAT1YBR041W VPS15P22219 1454 aa5.46□□□□□ -1.54
FAT1YBR041W YRF1-1P0CX20 1796 aa5.44□□□□□ -1.54
FAT1YBR041W YRF1-5P0CX21 1796 aa5.44□□□□□ -1.54
FAT1YBR041W YRF1-8P0CX22 1796 aa5.44□□□□□ -1.54
FAT1YBR041W ARO1P08566 1588 aaKnown RBP5.44□□□□□ -1.54
FAT1YBR041W GDB1Q06625 1536 aa5.44□□□□□ -1.54
FAT1YBR041W SPO14P36126 1683 aa5.43□□□□□ -1.54
FAT1YBR041W NUP159P40477 1460 aa5.43□□□□□ -1.54
FAT1YBR041W GCN2P15442 1659 aa5.42□□□□□ -1.54
FAT1YBR041W IFH1P39520 1085 aa5.41□□□□□ -1.54
FAT1YBR041W IQG1Q12280 1495 aa5.39□□□□□ -1.55
FAT1YBR041W SRB8P25648 1427 aa5.38□□□□□ -1.55
FAT1YBR041W MET5P47169 1442 aa5.38□□□□□ -1.55
FAT1YBR041W PDR5P33302 1511 aaKnown RBP5.38□□□□□ -1.55
FAT1YBR041W DIP2Q12220 943 aaPredicted RBP5.36□□□□□ -1.55
FAT1YBR041W RTT106P40161 455 aa5.33□□□□□ -1.56
FAT1YBR041W YOR093CQ12275 1648 aa5.33□□□□□ -1.56
FAT1YBR041W MMS1Q06211 1407 aa5.32□□□□□ -1.56
FAT1YBR041W YSP2Q06681 1438 aa5.32□□□□□ -1.56
FAT1YBR041W BUD3P25558 1636 aa5.32□□□□□ -1.56
FAT1YBR041W NUP157P40064 1391 aaKnown RBP5.32□□□□□ -1.56
FAT1YBR041W CHC1P22137 1653 aaKnown RBP5.32□□□□□ -1.56
FAT1YBR041W SEC7P11075 2009 aaKnown RBP5.3□□□□□ -1.56
FAT1YBR041W MET10P39692 1035 aa5.3□□□□□ -1.56
FAT1YBR041W DOP1Q03921 1698 aa5.27□□□□□ -1.57
FAT1YBR041W TRM3Q07527 1436 aa5.24□□□□□ -1.57
FAT1YBR041W VMR1P38735 1592 aa5.24□□□□□ -1.57
FAT1YBR041W NUP188P52593 1655 aaKnown RBP5.23□□□□□ -1.57
FAT1YBR041W POL5P39985 1022 aaKnown RBP5.23□□□□□ -1.57
FAT1YBR041W MRPL32P25348 183 aa5.22□□□□□ -1.57
FAT1YBR041W CKB1P43639 278 aa5.22□□□□□ -1.57
FAT1YBR041W TY3B-IQ7LHG5 1498 aaKnown RBP5.22□□□□□ -1.57
FAT1YBR041W LTE1P07866 1435 aa5.21□□□□□ -1.58
FAT1YBR041W NSR1P27476 414 aaKnown RBP RIP-Chip data5.21□□□□□ -1.58not detected
FAT1YBR041W BNR1P40450 1375 aa5.2□□□□□ -1.58
FAT1YBR041W AVT3P36062 692 aa5.19□□□□□ -1.58
FAT1YBR041W BUD21Q08492 214 aaPredicted RBP5.19□□□□□ -1.58
FAT1YBR041W SEC3P33332 1336 aaKnown RBP5.19□□□□□ -1.58
FAT1YBR041W DNF2Q12675 1612 aa5.19□□□□□ -1.58
FAT1YBR041W RAV1P47104 1357 aa5.18□□□□□ -1.58
FAT1YBR041W IML1P47170 1584 aa5.18□□□□□ -1.58
FAT1YBR041W NUP192P47054 1683 aa5.18□□□□□ -1.58
FAT1YBR041W PDR11P40550 1411 aa5.17□□□□□ -1.58
FAT1YBR041W DMA1P38823 416 aa5.16□□□□□ -1.58
FAT1YBR041W ENP1P38333 483 aaKnown RBP5.16□□□□□ -1.58
FAT1YBR041W MHP1P43638 1398 aa5.16□□□□□ -1.58
FAT1YBR041W NOP7P53261 605 aaKnown RBP5.15□□□□□ -1.58
FAT1YBR041W BNI1P41832 1953 aa5.15□□□□□ -1.59
FAT1YBR041W RTC1Q08281 1341 aa5.14□□□□□ -1.59
FAT1YBR041W YLR419WQ06698 1435 aaKnown RBP5.14□□□□□ -1.59
FAT1YBR041W HAP1P0CE41 1502 aa5.13□□□□□ -1.59
FAT1YBR041W DRS2P39524 1355 aa5.12□□□□□ -1.59
FAT1YBR041W PAF1P38351 445 aa5.12□□□□□ -1.59
FAT1YBR041W SPT7P35177 1332 aa5.11□□□□□ -1.59
FAT1YBR041W RPL17AP05740 184 aaKnown RBP5.11□□□□□ -1.59
FAT1YBR041W RPL17BP46990 184 aaKnown RBP5.11□□□□□ -1.59
FAT1YBR041W REB1P21538 810 aa5.09□□□□□ -1.6
FAT1YBR041W NOP2P40991 618 aaKnown RBP5.07□□□□□ -1.6
FAT1YBR041W BUD31P25337 157 aaPredicted RBP5.06□□□□□ -1.6
FAT1YBR041W MLP1Q02455 1875 aaKnown RBP5.06□□□□□ -1.6
FAT1YBR041W BCK1Q01389 1478 aa5.06□□□□□ -1.6
FAT1YBR041W YGL015CP33199 130 aa5.06□□□□□ -1.6
FAT1YBR041W LEO1P38439 464 aa5.04□□□□□ -1.6
FAT1YBR041W ESL2P36168 1195 aa5.03□□□□□ -1.6
FAT1YBR041W PRS1P32895 427 aaKnown RBP5.02□□□□□ -1.61
FAT1YBR041W DNF3Q12674 1656 aa5.02□□□□□ -1.61
FAT1YBR041W PSD2P53037 1138 aaKnown RBP5.01□□□□□ -1.61
FAT1YBR041W SCT1P32784 759 aa5□□□□□ -1.61
FAT1YBR041W TAF5P38129 798 aa5□□□□□ -1.61
FAT1YBR041W IPL1P38991 367 aa5□□□□□ -1.61
FAT1YBR041W PDS5Q04264 1277 aa5□□□□□ -1.61
FAT1YBR041W ITT1Q04638 464 aa4.99□□□□□ -1.61
FAT1YBR041W IOC4Q04213 475 aa4.99□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms