RNA–Protein interactions for RNA: YBL048W

RRT1, Transcript of Protein of unknown function, yeastyeast

Gene RRT1, Length 312 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRT1YBL048W RAM2P29703 316 aa9.66□□□□□ -0.86
RRT1YBL048W YEL023CP39992 682 aa9.66□□□□□ -0.86
RRT1YBL048W YDL129WQ07555 291 aa9.65□□□□□ -0.86
RRT1YBL048W SAP30P38429 201 aa9.63□□□□□ -0.87
RRT1YBL048W GRE2Q12068 342 aaKnown RBP9.62□□□□□ -0.87
RRT1YBL048W EDS1P38073 919 aa9.58□□□□□ -0.88
RRT1YBL048W PTC3P34221 468 aaKnown RBP9.57□□□□□ -0.88
RRT1YBL048W MIF2P35201 549 aa9.57□□□□□ -0.88
RRT1YBL048W CHL1P22516 861 aaPredicted RBP9.56□□□□□ -0.88
RRT1YBL048W GUT1P32190 709 aa9.55□□□□□ -0.88
RRT1YBL048W PRE3P38624 215 aa9.53□□□□□ -0.88
RRT1YBL048W ATH1P48016 1211 aa9.52□□□□□ -0.89
RRT1YBL048W COQ8P27697 501 aa9.51□□□□□ -0.89
RRT1YBL048W NST1P53935 1240 aa9.5□□□□□ -0.89
RRT1YBL048W BCK2P33306 851 aa9.48□□□□□ -0.89
RRT1YBL048W PML39Q03760 334 aa9.47□□□□□ -0.89
RRT1YBL048W SOL3P38858 249 aa9.44□□□□□ -0.9
RRT1YBL048W NOP53Q12080 455 aaKnown RBP9.44□□□□□ -0.9
RRT1YBL048W YDR344CQ05510 147 aa9.41□□□□□ -0.9
RRT1YBL048W MPH3P0CE00 602 aa9.38□□□□□ -0.91
RRT1YBL048W AI4P03878 556 aa9.37□□□□□ -0.91
RRT1YBL048W ARH1P48360 493 aa9.35□□□□□ -0.91
RRT1YBL048W MID1P41821 548 aa9.34□□□□□ -0.91
RRT1YBL048W ELP4Q02884 456 aaKnown RBP9.33□□□□□ -0.92
RRT1YBL048W ILV3P39522 585 aaKnown RBP9.31□□□□□ -0.92
RRT1YBL048W VRP1P37370 817 aa9.3□□□□□ -0.92
RRT1YBL048W YGR273CP53329 174 aa9.3□□□□□ -0.92
RRT1YBL048W XDJ1P39102 459 aa9.29□□□□□ -0.92
RRT1YBL048W SPT23P35210 1082 aa9.23□□□□□ -0.93
RRT1YBL048W PEX29Q03370 554 aa9.22□□□□□ -0.93
RRT1YBL048W HAP5Q02516 242 aa9.2□□□□□ -0.94
RRT1YBL048W MPC54Q08550 464 aa9.17□□□□□ -0.94
RRT1YBL048W BNI4P53858 892 aa9.16□□□□□ -0.94
RRT1YBL048W SLI15P38283 698 aa9.15□□□□□ -0.94
RRT1YBL048W YML082WQ04533 649 aaKnown RBP9.13□□□□□ -0.95
RRT1YBL048W SET1P38827 1080 aaKnown RBP9.11□□□□□ -0.95
RRT1YBL048W NMA111P53920 997 aa9.11□□□□□ -0.95
RRT1YBL048W KEX1P09620 729 aa9.09□□□□□ -0.95
RRT1YBL048W DPL1Q05567 589 aa9.09□□□□□ -0.95
RRT1YBL048W PTC2P39966 464 aaKnown RBP9.08□□□□□ -0.96
RRT1YBL048W DPS1P04802 557 aaKnown RBP9.05□□□□□ -0.96
RRT1YBL048W UBP14P38237 781 aaKnown RBP9.03□□□□□ -0.96
RRT1YBL048W YLR326WQ06170 240 aaKnown RBP9.02□□□□□ -0.97
RRT1YBL048W ISU2Q12056 156 aa9□□□□□ -0.97
RRT1YBL048W CDC73Q06697 393 aa8.97□□□□□ -0.97
RRT1YBL048W RAM1P22007 431 aa8.96□□□□□ -0.98
RRT1YBL048W PCS60P38137 543 aaKnown RBP RIP-Chip data8.95□□□□□ -0.98not detected
RRT1YBL048W VHR2P40041 505 aa8.95□□□□□ -0.98
RRT1YBL048W YPR015CQ12531 247 aa8.95□□□□□ -0.98
RRT1YBL048W RAD54P32863 898 aa8.9□□□□□ -0.98
RRT1YBL048W IFH1P39520 1085 aa8.9□□□□□ -0.98
RRT1YBL048W SRC1Q03707 834 aa8.88□□□□□ -0.99
RRT1YBL048W YDR090CQ03193 310 aa8.87□□□□□ -0.99
RRT1YBL048W RPP1BP10622 106 aaKnown RBP8.84□□□□□ -0.99
RRT1YBL048W PDR1P12383 1068 aa8.84□□□□□ -0.99
RRT1YBL048W YPR148CQ06523 435 aa8.84□□□□□ -0.99
RRT1YBL048W RAS1P01119 309 aa8.81□□□□□ -1
RRT1YBL048W GAP1P19145 602 aaPredicted RBP8.79□□□□□ -1
RRT1YBL048W SAS4Q04003 481 aa8.79□□□□□ -1
RRT1YBL048W GYP1Q08484 637 aa8.79□□□□□ -1
RRT1YBL048W REF2P42073 533 aaPredicted RBP8.77□□□□□ -1.01
RRT1YBL048W KIC1P38692 1080 aa8.75□□□□□ -1.01
RRT1YBL048W SDH2P21801 266 aa8.74□□□□□ -1.01
RRT1YBL048W AMS1P22855 1083 aa8.74□□□□□ -1.01
RRT1YBL048W CSC1Q06538 782 aa8.73□□□□□ -1.01
RRT1YBL048W TFB4Q12004 338 aa8.72□□□□□ -1.01
RRT1YBL048W YRR1Q12172 810 aa8.71□□□□□ -1.02
RRT1YBL048W BUD20Q08004 166 aaPredicted RBP8.7□□□□□ -1.02
RRT1YBL048W PEX21P50091 288 aa8.69□□□□□ -1.02
RRT1YBL048W ORC6P38826 435 aa8.68□□□□□ -1.02
RRT1YBL048W COX6P00427 148 aa8.66□□□□□ -1.02
RRT1YBL048W VPS70P47161 811 aa8.66□□□□□ -1.02
RRT1YBL048W STR2P47164 639 aa8.66□□□□□ -1.02
RRT1YBL048W MAK21Q12176 1025 aaKnown RBP8.66□□□□□ -1.02
RRT1YBL048W PRT1P06103 763 aaKnown RBP8.65□□□□□ -1.02
RRT1YBL048W TUM1Q08686 304 aaKnown RBP8.64□□□□□ -1.03
RRT1YBL048W MRF1P30775 413 aaPredicted RBP8.63□□□□□ -1.03
RRT1YBL048W ISM1P48526 1002 aa8.63□□□□□ -1.03
RRT1YBL048W YEL077CQ3E7X8 1277 aa8.62□□□□□ -1.03
RRT1YBL048W TRK1P12685 1235 aa8.61□□□□□ -1.03
RRT1YBL048W NUD1P32336 851 aa8.61□□□□□ -1.03
RRT1YBL048W MVP1P40959 511 aaKnown RBP8.59□□□□□ -1.03
RRT1YBL048W RGR1P19263 1082 aa8.54□□□□□ -1.04
RRT1YBL048W NPL4P33755 580 aa8.54□□□□□ -1.04
RRT1YBL048W TY1A-DR4O74302 440 aa8.53□□□□□ -1.04
RRT1YBL048W TY1A-HP0C2I4 478 aaKnown RBP8.53□□□□□ -1.04
RRT1YBL048W TY1A-AP0CX57 440 aa8.53□□□□□ -1.04
RRT1YBL048W TY1A-PR1P0CX58 440 aa8.53□□□□□ -1.04
RRT1YBL048W TY1A-ORP0CX59 440 aa8.53□□□□□ -1.04
RRT1YBL048W TY1A-PR2P0CX60 440 aa8.53□□□□□ -1.04
RRT1YBL048W TY1A-DR5P0CX65 440 aa8.53□□□□□ -1.04
RRT1YBL048W TY1A-ER2P0CX66 440 aa8.53□□□□□ -1.04
RRT1YBL048W TY1A-GR3P0CX67 440 aa8.53□□□□□ -1.04
RRT1YBL048W TY1A-LR1P0CX68 440 aa8.53□□□□□ -1.04
RRT1YBL048W TY1A-MR2P0CX69 440 aa8.53□□□□□ -1.04
RRT1YBL048W SEC2P17065 759 aa8.53□□□□□ -1.04
RRT1YBL048W TY1A-JR2P47099 440 aa8.53□□□□□ -1.04
RRT1YBL048W TY1A-DR1Q03856 440 aa8.53□□□□□ -1.04
RRT1YBL048W TY1A-ML1Q04706 440 aaKnown RBP8.53□□□□□ -1.04
RRT1YBL048W TY1A-BRQ12217 440 aa8.53□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms