RNA–Protein interactions for RNA: HRA1

HRA1, Non-protein-coding RNA, yeastyeast

Gene HRA1, Length 564 nt, Biotype ncRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRA1HRA1 VTH1P40438 1549 aa13.21□□□□□ -0.29
HRA1HRA1 VTH2P40890 1549 aa13.21□□□□□ -0.29
HRA1HRA1 TY1B-JR2P47100 1755 aaKnown RBP13.21□□□□□ -0.29
HRA1HRA1 TY1B-ER2Q03619 1755 aa13.21□□□□□ -0.29
HRA1HRA1 TY1B-MR1Q04214 1755 aa13.21□□□□□ -0.29
HRA1HRA1 TY1B-MR2Q04670 1755 aaKnown RBP13.21□□□□□ -0.29
HRA1HRA1 TY1B-LR1Q12088 1755 aaKnown RBP13.21□□□□□ -0.29
HRA1HRA1 TY1B-NL1Q12112 1755 aa13.21□□□□□ -0.29
HRA1HRA1 TY1B-GR1Q12141 1755 aa13.21□□□□□ -0.29
HRA1HRA1 TY1B-BLQ12490 1755 aa13.21□□□□□ -0.29
HRA1HRA1 DNF2Q12675 1612 aa13.16□□□□□ -0.3
HRA1HRA1 RPO21P04050 1733 aaKnown RBP13.16□□□□□ -0.3
HRA1HRA1 MYO4P32492 1471 aa13.13□□□□□ -0.31
HRA1HRA1 NUP170P38181 1502 aa13.13□□□□□ -0.31
HRA1HRA1 SNT2P53127 1403 aa13.12□□□□□ -0.31
HRA1HRA1 MET10P39692 1035 aa13.11□□□□□ -0.31
HRA1HRA1 SNQ2P32568 1501 aaKnown RBP13□□□□□ -0.33
HRA1HRA1 RTT106P40161 455 aa13□□□□□ -0.33
HRA1HRA1 STH1P32597 1359 aa12.99□□□□□ -0.33
HRA1HRA1 ULS1Q08562 1619 aa12.98□□□□□ -0.33
HRA1HRA1 SPO14P36126 1683 aa12.96□□□□□ -0.33
HRA1HRA1 YTA7P40340 1379 aa12.94□□□□□ -0.34
HRA1HRA1 YOR093CQ12275 1648 aa12.93□□□□□ -0.34
HRA1HRA1 TRM3Q07527 1436 aa12.88□□□□□ -0.35
HRA1HRA1 PDR12Q02785 1511 aa12.88□□□□□ -0.35
HRA1HRA1 DOP1Q03921 1698 aa12.88□□□□□ -0.35
HRA1HRA1 IQG1Q12280 1495 aa12.86□□□□□ -0.35
HRA1HRA1 PDR10P51533 1564 aa12.86□□□□□ -0.35
HRA1HRA1 NUP157P40064 1391 aaKnown RBP12.81□□□□□ -0.36
HRA1HRA1 GDB1Q06625 1536 aa12.78□□□□□ -0.36
HRA1HRA1 BUD3P25558 1636 aa12.76□□□□□ -0.37
HRA1HRA1 MLP2P40457 1679 aa12.7□□□□□ -0.38
HRA1HRA1 PDR15Q04182 1529 aaKnown RBP12.7□□□□□ -0.38
HRA1HRA1 ARO1P08566 1588 aaKnown RBP12.62□□□□□ -0.39
HRA1HRA1 YAP3P38749 330 aa12.59□□□□□ -0.39
HRA1HRA1 DNF3Q12674 1656 aa12.58□□□□□ -0.4
HRA1HRA1 CHC1P22137 1653 aaKnown RBP12.57□□□□□ -0.4
HRA1HRA1 SAS10Q12136 610 aaPredicted RBP12.56□□□□□ -0.4
HRA1HRA1 TAF7Q05021 590 aa12.54□□□□□ -0.4
HRA1HRA1 MAK10Q02197 733 aa12.52□□□□□ -0.41
HRA1HRA1 IFH1P39520 1085 aa12.5□□□□□ -0.41
HRA1HRA1 BNR1P40450 1375 aa12.44□□□□□ -0.42
HRA1HRA1 TY3B-GQ99315 1547 aa12.44□□□□□ -0.42
HRA1HRA1 URN1Q06525 465 aaKnown RBP12.44□□□□□ -0.42
HRA1HRA1 SEC7P11075 2009 aaKnown RBP12.44□□□□□ -0.42
HRA1HRA1 CAT8P39113 1433 aa12.43□□□□□ -0.42
HRA1HRA1 CKB1P43639 278 aa12.42□□□□□ -0.42
HRA1HRA1 YSP2Q06681 1438 aa12.36□□□□□ -0.43
HRA1HRA1 GEA1P47102 1408 aaPredicted RBP12.3□□□□□ -0.44
HRA1HRA1 YMR196WQ04336 1088 aa12.27□□□□□ -0.45
HRA1HRA1 USO1P25386 1790 aa12.25□□□□□ -0.45
HRA1HRA1 THI12P42883 340 aa12.24□□□□□ -0.45
HRA1HRA1 THI5P43534 340 aa12.24□□□□□ -0.45
HRA1HRA1 THI11P47183 340 aa12.24□□□□□ -0.45
HRA1HRA1 THI13Q07748 340 aa12.24□□□□□ -0.45
HRA1HRA1 YBT1P32386 1661 aa12.23□□□□□ -0.45
HRA1HRA1 IPL1P38991 367 aa12.19□□□□□ -0.46
HRA1HRA1 TY1B-NL2Q99337 1749 aaKnown RBP12.11□□□□□ -0.47
HRA1HRA1 HAP1P0CE41 1502 aa12.1□□□□□ -0.47
HRA1HRA1 TYS1P36421 394 aaKnown RBP12.08□□□□□ -0.48
HRA1HRA1 SRB8P25648 1427 aa12.08□□□□□ -0.48
HRA1HRA1 IML1P47170 1584 aa12.08□□□□□ -0.48
HRA1HRA1 BUD21Q08492 214 aaPredicted RBP12.06□□□□□ -0.48
HRA1HRA1 GLN1P32288 370 aaKnown RBP12.04□□□□□ -0.48
HRA1HRA1 YAH1Q12184 172 aaKnown RBP12.04□□□□□ -0.48
HRA1HRA1 NUP188P52593 1655 aaKnown RBP12.03□□□□□ -0.48
HRA1HRA1 VMR1P38735 1592 aa12.02□□□□□ -0.49
HRA1HRA1 YIL055CP40523 627 aaKnown RBP11.93□□□□□ -0.5
HRA1HRA1 APP1P53933 587 aa11.91□□□□□ -0.5
HRA1HRA1 PDR5P33302 1511 aaKnown RBP11.87□□□□□ -0.51
HRA1HRA1 PRI1P10363 409 aa11.84□□□□□ -0.51
HRA1HRA1 PTP3P40048 928 aa11.84□□□□□ -0.51
HRA1HRA1 MRX12P47084 519 aa11.8□□□□□ -0.52
HRA1HRA1 RIA1P53893 1110 aa11.79□□□□□ -0.52
HRA1HRA1 KRE5P22023 1365 aa11.77□□□□□ -0.53
HRA1HRA1 YMR074CQ04773 145 aa11.76□□□□□ -0.53
HRA1HRA1 PDR11P40550 1411 aa11.74□□□□□ -0.53
HRA1HRA1 YNR029CP53729 429 aaKnown RBP11.73□□□□□ -0.53
HRA1HRA1 CFT1Q06632 1357 aaKnown RBP11.73□□□□□ -0.53
HRA1HRA1 BCK1Q01389 1478 aa11.72□□□□□ -0.53
HRA1HRA1 REB1P21538 810 aa11.71□□□□□ -0.53
HRA1HRA1 ENT1Q12518 454 aa11.7□□□□□ -0.54
HRA1HRA1 ENV9Q08651 330 aa11.65□□□□□ -0.54
HRA1HRA1 IMH1Q06704 911 aaKnown RBP11.61□□□□□ -0.55
HRA1HRA1 BUD31P25337 157 aaPredicted RBP11.58□□□□□ -0.56
HRA1HRA1 CAB1Q04430 367 aa11.55□□□□□ -0.56
HRA1HRA1 IKI3Q06706 1349 aaKnown RBP11.53□□□□□ -0.56
HRA1HRA1 GCN2P15442 1659 aa11.52□□□□□ -0.57
HRA1HRA1 ALD4P46367 519 aaKnown RBP11.49□□□□□ -0.57
HRA1HRA1 TY3B-IQ7LHG5 1498 aaKnown RBP11.49□□□□□ -0.57
HRA1HRA1 PAF1P38351 445 aa11.48□□□□□ -0.57
HRA1HRA1 RAD9P14737 1309 aa11.47□□□□□ -0.57
HRA1HRA1 UBP1P25037 809 aa11.46□□□□□ -0.57
HRA1HRA1 PRP45P28004 379 aaPredicted RBP11.45□□□□□ -0.58
HRA1HRA1 LEU3P08638 886 aa11.44□□□□□ -0.58
HRA1HRA1 RAV1P47104 1357 aa11.43□□□□□ -0.58
HRA1HRA1 NUP192P47054 1683 aa11.43□□□□□ -0.58
HRA1HRA1 SSM4P40318 1319 aa11.43□□□□□ -0.58
HRA1HRA1 TAF5P38129 798 aa11.42□□□□□ -0.58
HRA1HRA1 NAP1P25293 417 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms