RNA–Protein interactions for RNA: ENST00000641828.1

CASC19-260, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 2,001 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-260ENST00000641828 PLEKHG5O94827 1062 aa9.92□□□□□ -0.82
CASC19-260ENST00000641828 CHGAP10645 457 aaKnown RBP9.92□□□□□ -0.82
CASC19-260ENST00000641828 PELP1Q8IZL8 1130 aaKnown RBP9.92□□□□□ -0.82
CASC19-260ENST00000641828 ZBTB47Q9UFB7 747 aaPredicted RBP9.92□□□□□ -0.82
CASC19-260ENST00000641828 BICRAQ9NZM4 1560 aa9.9□□□□□ -0.82
CASC19-260ENST00000641828 TRIM41Q8WV44 630 aa9.86□□□□□ -0.83
CASC19-260ENST00000641828 HRCP23327 699 aa9.82□□□□□ -0.84
CASC19-260ENST00000641828 HS6ST3Q8IZP7 471 aa9.82□□□□□ -0.84
CASC19-260ENST00000641828 CUX2O14529 1486 aa9.77□□□□□ -0.84
CASC19-260ENST00000641828 GSE1Q14687 1217 aa9.77□□□□□ -0.85
CASC19-260ENST00000641828 RNF25Q96BH1 459 aaPredicted RBP9.77□□□□□ -0.85
CASC19-260ENST00000641828 NBR1Q14596 966 aa9.75□□□□□ -0.85
CASC19-260ENST00000641828 EIF4G1Q04637 1599 aaKnown RBP9.74□□□□□ -0.85
CASC19-260ENST00000641828 NUBP1P53384 320 aa9.71□□□□□ -0.86
CASC19-260ENST00000641828 SHROOM4Q9ULL8 1493 aa9.69□□□□□ -0.86
CASC19-260ENST00000641828 RIOK3O14730 519 aaKnown RBP9.68□□□□□ -0.86
CASC19-260ENST00000641828 NKX1-1Q15270 411 aaPredicted RBP9.68□□□□□ -0.86
CASC19-260ENST00000641828 DCAF8Q5TAQ9 597 aa9.67□□□□□ -0.86
CASC19-260ENST00000641828 MYT1Q01538 1121 aa9.66□□□□□ -0.86
CASC19-260ENST00000641828 GTPBP6O43824 516 aaPredicted RBP9.65□□□□□ -0.87
CASC19-260ENST00000641828 STK25O00506 426 aa9.62□□□□□ -0.87
CASC19-260ENST00000641828 FAM212AQ96EL1 285 aa9.61□□□□□ -0.87
CASC19-260ENST00000641828 ERCC6Q03468 1493 aa9.61□□□□□ -0.87
CASC19-260ENST00000641828 VGFO15240 615 aaPredicted RBP9.61□□□□□ -0.87
CASC19-260ENST00000641828 SPDYE1Q8NFV5 336 aaPredicted RBP9.6□□□□□ -0.87
CASC19-260ENST00000641828 CREBZFQ9NS37 354 aa9.57□□□□□ -0.88
CASC19-260ENST00000641828 CHRM1P11229 460 aaPredicted RBP9.56□□□□□ -0.88
CASC19-260ENST00000641828 MNX1P50219 401 aaPredicted RBP9.56□□□□□ -0.88
CASC19-260ENST00000641828 MYO15BQ96JP2 1530 aa9.55□□□□□ -0.88
CASC19-260ENST00000641828 CLEC11AQ9Y240 323 aa9.55□□□□□ -0.88
CASC19-260ENST00000641828 PRR29P0C7W0 189 aa9.54□□□□□ -0.88
CASC19-260ENST00000641828 CACNB1Q02641 598 aaPredicted RBP9.54□□□□□ -0.88
CASC19-260ENST00000641828 SGIP1Q9BQI5 828 aa9.54□□□□□ -0.88
CASC19-260ENST00000641828 STK24Q9Y6E0 443 aa9.53□□□□□ -0.88
CASC19-260ENST00000641828 RASEFQ8IZ41 740 aa9.53□□□□□ -0.88
CASC19-260ENST00000641828 AKT1S1Q96B36 256 aa9.53□□□□□ -0.88
CASC19-260ENST00000641828 BCL11BQ9C0K0 894 aaPredicted RBP9.53□□□□□ -0.88
CASC19-260ENST00000641828 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.52□□□□□ -0.89
CASC19-260ENST00000641828 ZFP91Q96JP5 570 aaPredicted RBP9.52□□□□□ -0.89
CASC19-260ENST00000641828 RYDENQ9NUL5 291 aaKnown RBP9.52□□□□□ -0.89
CASC19-260ENST00000641828 RBM42Q9BTD8 480 aaKnown RBP9.5□□□□□ -0.89
CASC19-260ENST00000641828 PYGBP11216 843 aa9.47□□□□□ -0.89
CASC19-260ENST00000641828 PPARGC1BQ86YN6 1023 aaKnown RBP9.46□□□□□ -0.89
CASC19-260ENST00000641828 PCGF6Q9BYE7 350 aa9.45□□□□□ -0.9
CASC19-260ENST00000641828 SCRIBQ14160 1630 aa9.45□□□□□ -0.9
CASC19-260ENST00000641828 REM2Q8IYK8 340 aaPredicted RBP9.44□□□□□ -0.9
CASC19-260ENST00000641828 P3H3Q8IVL6 736 aa9.43□□□□□ -0.9
CASC19-260ENST00000641828 TIMELESSQ9UNS1 1208 aa9.4□□□□□ -0.9
CASC19-260ENST00000641828 GTF3C3Q9Y5Q9 886 aa9.39□□□□□ -0.91
CASC19-260ENST00000641828 TULP1O00294 542 aaPredicted RBP9.38□□□□□ -0.91
CASC19-260ENST00000641828 WDR70Q9NW82 654 aa9.35□□□□□ -0.91
CASC19-260ENST00000641828 ZNF467Q7Z7K2 595 aaPredicted RBP9.34□□□□□ -0.91
CASC19-260ENST00000641828 CADPS2Q86UW7 1296 aa9.34□□□□□ -0.91
CASC19-260ENST00000641828 KCNV2Q8TDN2 545 aa9.34□□□□□ -0.91
CASC19-260ENST00000641828 PITPNM1O00562 1244 aa9.34□□□□□ -0.91
CASC19-260ENST00000641828 TMEM132AQ24JP5 1023 aa9.32□□□□□ -0.92
CASC19-260ENST00000641828 THOC2Q8NI27 1593 aaKnown RBP9.32□□□□□ -0.92
CASC19-260ENST00000641828 PDAP1Q13442 181 aaKnown RBP9.31□□□□□ -0.92
CASC19-260ENST00000641828 TSPYL2Q9H2G4 693 aaPredicted RBP9.31□□□□□ -0.92
CASC19-260ENST00000641828 LMOD2Q6P5Q4 547 aa9.3□□□□□ -0.92
CASC19-260ENST00000641828 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.29□□□□□ -0.92
CASC19-260ENST00000641828 NESP48681 1621 aa9.28□□□□□ -0.92
CASC19-260ENST00000641828 POTEHQ6S545 545 aa9.28□□□□□ -0.92
CASC19-260ENST00000641828 DCAF1Q9Y4B6 1507 aa9.28□□□□□ -0.92
CASC19-260ENST00000641828 ZEB1P37275 1124 aaPredicted RBP9.27□□□□□ -0.93
CASC19-260ENST00000641828 ERICH6Q7L0X2 663 aa9.27□□□□□ -0.93
CASC19-260ENST00000641828 PCDHB8Q9UN66 801 aa9.26□□□□□ -0.93
CASC19-260ENST00000641828 PCDHB13Q9Y5F0 798 aa9.26□□□□□ -0.93
CASC19-260ENST00000641828 CHADLQ6NUI6 762 aa9.26□□□□□ -0.93
CASC19-260ENST00000641828 MFRPQ9BY79 579 aa9.26□□□□□ -0.93
CASC19-260ENST00000641828 SMARCA2P51531 1590 aa9.24□□□□□ -0.93
CASC19-260ENST00000641828 BAZ1AQ9NRL2 1556 aaPredicted RBP9.24□□□□□ -0.93
CASC19-260ENST00000641828 PSEN1P49768 467 aa9.23□□□□□ -0.93
CASC19-260ENST00000641828 SUPT5HO00267 1087 aaKnown RBP9.22□□□□□ -0.93
CASC19-260ENST00000641828 FARP1Q9Y4F1 1045 aaPredicted RBP9.22□□□□□ -0.93
CASC19-260ENST00000641828 ZNF579Q8NAF0 562 aaKnown RBP9.21□□□□□ -0.93
CASC19-260ENST00000641828 TRIM26Q12899 539 aaPredicted RBP9.2□□□□□ -0.94
CASC19-260ENST00000641828 ARHGEF1Q92888 912 aaKnown RBP9.2□□□□□ -0.94
CASC19-260ENST00000641828 CCDC61Q9Y6R9 512 aa9.2□□□□□ -0.94
CASC19-260ENST00000641828 RIMBP3CA6NJZ7 1639 aa9.2□□□□□ -0.94
CASC19-260ENST00000641828 RIMBP3BA6NNM3 1639 aa9.2□□□□□ -0.94
CASC19-260ENST00000641828 RIMBP3Q9UFD9 1639 aa9.2□□□□□ -0.94
CASC19-260ENST00000641828 KIF21AQ7Z4S6 1674 aa9.18□□□□□ -0.94
CASC19-260ENST00000641828 NCAPD3P42695 1498 aa9.18□□□□□ -0.94
CASC19-260ENST00000641828 PPP1R37O75864 691 aa9.17□□□□□ -0.94
CASC19-260ENST00000641828 E2F4Q16254 413 aa9.17□□□□□ -0.94
CASC19-260ENST00000641828 BRPF1P55201 1214 aaPredicted RBP9.15□□□□□ -0.94
CASC19-260ENST00000641828 ILDR1Q86SU0 546 aaPredicted RBP9.15□□□□□ -0.94
CASC19-260ENST00000641828 FBXO22Q8NEZ5 403 aa9.15□□□□□ -0.94
CASC19-260ENST00000641828 ZC3H15Q8WU90 426 aaKnown RBP9.15□□□□□ -0.94
CASC19-260ENST00000641828 ZCCHC6Q5VYS8 1495 aaKnown RBP9.14□□□□□ -0.95
CASC19-260ENST00000641828 TTBK1Q5TCY1 1321 aaPredicted RBP9.14□□□□□ -0.95
CASC19-260ENST00000641828 NLRP6P59044 892 aa9.14□□□□□ -0.95
CASC19-260ENST00000641828 EFCAB3Q8N7B9 438 aa9.14□□□□□ -0.95
CASC19-260ENST00000641828 C14orf37Q86TY3 774 aa9.13□□□□□ -0.95
CASC19-260ENST00000641828 IFNL1Q8IU54 200 aa9.13□□□□□ -0.95
CASC19-260ENST00000641828 SEMA3EO15041 775 aa9.12□□□□□ -0.95
CASC19-260ENST00000641828 SOX12O15370 315 aa9.12□□□□□ -0.95
CASC19-260ENST00000641828 CABP2Q9NPB3 220 aa9.12□□□□□ -0.95
CASC19-260ENST00000641828 ACIN1Q9UKV3 1341 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms