RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 EIF4G2P78344 907 aaKnown RBP eCLIP23.94■■□□□ 1.42
SCARB2-223ENST00000640640 CANXP27824 592 aaKnown RBP23.93■■□□□ 1.42
SCARB2-223ENST00000640640 VPS8Q8N3P4 1428 aa23.91■■□□□ 1.42
SCARB2-223ENST00000640640 FHAD1B1AJZ9 1412 aa23.9■■□□□ 1.42
SCARB2-223ENST00000640640 NEFMP07197 916 aa23.9■■□□□ 1.42
SCARB2-223ENST00000640640 CFDP1Q9UEE9 299 aaPredicted RBP23.9■■□□□ 1.42
SCARB2-223ENST00000640640 CCNB3Q8WWL7 1395 aa23.89■■□□□ 1.42
SCARB2-223ENST00000640640 TMC1Q8TDI8 760 aa23.89■■□□□ 1.41
SCARB2-223ENST00000640640 MRS2Q9HD23 443 aa23.88■■□□□ 1.41
SCARB2-223ENST00000640640 KCNH8Q96L42 1107 aa23.87■■□□□ 1.41
SCARB2-223ENST00000640640 ESF1Q9H501 851 aaKnown RBP23.87■■□□□ 1.41
SCARB2-223ENST00000640640 SCAF1Q9H7N4 1312 aaKnown RBP23.85■■□□□ 1.41
SCARB2-223ENST00000640640 STAG3Q9UJ98 1225 aa23.83■■□□□ 1.41
SCARB2-223ENST00000640640 SIN3AQ96ST3 1273 aa23.82■■□□□ 1.4
SCARB2-223ENST00000640640 SALL2Q9Y467 1007 aaPredicted RBP23.82■■□□□ 1.4
SCARB2-223ENST00000640640 ZBTB47Q9UFB7 747 aaPredicted RBP23.78■■□□□ 1.4
SCARB2-223ENST00000640640 KANK4Q5T7N3 995 aaPredicted RBP23.77■■□□□ 1.4
SCARB2-223ENST00000640640 ERCC6Q03468 1493 aa23.76■■□□□ 1.39
SCARB2-223ENST00000640640 ATAD2BQ9ULI0 1458 aa23.75■■□□□ 1.39
SCARB2-223ENST00000640640 SMARCA4P51532 1647 aa23.73■■□□□ 1.39
SCARB2-223ENST00000640640 RGL3Q3MIN7 710 aa23.71■■□□□ 1.39
SCARB2-223ENST00000640640 SLC24A1O60721 1099 aa23.69■■□□□ 1.38
SCARB2-223ENST00000640640 ANP32AP39687 249 aaKnown RBP23.69■■□□□ 1.38
SCARB2-223ENST00000640640 BCL11AQ9H165 835 aa23.67■■□□□ 1.38
SCARB2-223ENST00000640640 EIF4G1Q04637 1599 aaKnown RBP23.66■■□□□ 1.38
SCARB2-223ENST00000640640 TDRD9Q8NDG6 1382 aaKnown RBP23.66■■□□□ 1.38
SCARB2-223ENST00000640640 CADPSQ9ULU8 1353 aa23.66■■□□□ 1.38
SCARB2-223ENST00000640640 PDS5BQ9NTI5 1447 aa23.63■■□□□ 1.37
SCARB2-223ENST00000640640 WDR43Q15061 677 aaKnown RBP eCLIP23.62■■□□□ 1.37
SCARB2-223ENST00000640640 CCDC136Q96JN2 1154 aa23.61■■□□□ 1.37
SCARB2-223ENST00000640640 NPM2Q86SE8 214 aaKnown RBP23.6■■□□□ 1.37
SCARB2-223ENST00000640640 TIMELESSQ9UNS1 1208 aa23.58■■□□□ 1.37
SCARB2-223ENST00000640640 RAPGEF2Q9Y4G8 1499 aa23.58■■□□□ 1.36
SCARB2-223ENST00000640640 SETD5Q9C0A6 1442 aa23.58■■□□□ 1.36
SCARB2-223ENST00000640640 RUSC2Q8N2Y8 1516 aa23.57■■□□□ 1.36
SCARB2-223ENST00000640640 IRX6P78412 446 aaPredicted RBP23.57■■□□□ 1.36
SCARB2-223ENST00000640640 PLPPR3Q6T4P5 718 aa23.56■■□□□ 1.36
SCARB2-223ENST00000640640 CARD11Q9BXL7 1154 aa23.56■■□□□ 1.36
SCARB2-223ENST00000640640 ARHGAP35Q9NRY4 1499 aa23.55■■□□□ 1.36
SCARB2-223ENST00000640640 FMN1Q68DA7 1419 aa23.52■■□□□ 1.36
SCARB2-223ENST00000640640 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.48■■□□□ 1.35
SCARB2-223ENST00000640640 RAB3GAP2Q9H2M9 1393 aa23.46■■□□□ 1.35
SCARB2-223ENST00000640640 SENP3Q9H4L4 574 aaPredicted RBP23.42■■□□□ 1.34
SCARB2-223ENST00000640640 CDCA8Q53HL2 280 aa23.4■■□□□ 1.34
SCARB2-223ENST00000640640 FHOD3Q2V2M9 1422 aa23.4■■□□□ 1.34
SCARB2-223ENST00000640640 SENP3-EIF4A1A0A087X0R7 540 aa23.39■■□□□ 1.34
SCARB2-223ENST00000640640 KNSTRNQ9Y448 316 aa23.37■■□□□ 1.33
SCARB2-223ENST00000640640 CARMIL2Q6F5E8 1435 aa23.37■■□□□ 1.33
SCARB2-223ENST00000640640 SUPT16HQ9Y5B9 1047 aaKnown RBP23.36■■□□□ 1.33
SCARB2-223ENST00000640640 DCAF11Q8TEB1 546 aa23.35■■□□□ 1.33
SCARB2-223ENST00000640640 FOXD1Q16676 465 aa23.32■■□□□ 1.32
SCARB2-223ENST00000640640 PPP1R15AO75807 674 aaPredicted RBP23.32■■□□□ 1.32
SCARB2-223ENST00000640640 UPF2Q9HAU5 1272 aaKnown RBP23.32■■□□□ 1.32
SCARB2-223ENST00000640640 FANCD2Q9BXW9 1451 aa23.3■■□□□ 1.32
SCARB2-223ENST00000640640 PKD2Q13563 968 aa23.3■■□□□ 1.32
SCARB2-223ENST00000640640 MPHOSPH9Q99550 1183 aa23.28■■□□□ 1.32
SCARB2-223ENST00000640640 HSPA5P11021 654 aaKnown RBP23.27■■□□□ 1.32
SCARB2-223ENST00000640640 CCER2I3L3R5 266 aa23.23■■□□□ 1.31
SCARB2-223ENST00000640640 CFAP53Q96M91 514 aa23.2■■□□□ 1.31
SCARB2-223ENST00000640640 IGF1RP08069 1367 aa23.2■■□□□ 1.3
SCARB2-223ENST00000640640 HSP90AA1P07900 732 aaKnown RBP23.18■■□□□ 1.3
SCARB2-223ENST00000640640 NCAPD3P42695 1498 aa23.18■■□□□ 1.3
SCARB2-223ENST00000640640 TMF1P82094 1093 aa23.17■■□□□ 1.3
SCARB2-223ENST00000640640 NUP155O75694 1391 aa23.17■■□□□ 1.3
SCARB2-223ENST00000640640 DHX57Q6P158 1386 aaKnown RBP23.16■■□□□ 1.3
SCARB2-223ENST00000640640 CC2D1BQ5T0F9 858 aaKnown RBP23.16■■□□□ 1.3
SCARB2-223ENST00000640640 ANKRD30AQ9BXX3 1397 aa23.16■■□□□ 1.3
SCARB2-223ENST00000640640 JPH4Q96JJ6 628 aa23.16■■□□□ 1.3
SCARB2-223ENST00000640640 FGD5Q6ZNL6 1462 aa23.14■■□□□ 1.3
SCARB2-223ENST00000640640 KANK1Q14678 1352 aa23.14■■□□□ 1.3
SCARB2-223ENST00000640640 ARID4BQ4LE39 1312 aaPredicted RBP23.13■■□□□ 1.29
SCARB2-223ENST00000640640 EFCAB2Q5VUJ9 269 aa23.13■■□□□ 1.29
SCARB2-223ENST00000640640 CCDC18Q5T9S5 1454 aa23.11■■□□□ 1.29
SCARB2-223ENST00000640640 L3MBTL2Q969R5 705 aa23.11■■□□□ 1.29
SCARB2-223ENST00000640640 NEUROD2Q15784 382 aa23.1■■□□□ 1.29
SCARB2-223ENST00000640640 PPP4R2Q9NY27 417 aa23.09■■□□□ 1.29
SCARB2-223ENST00000640640 POGKQ9P215 609 aa23.09■■□□□ 1.29
SCARB2-223ENST00000640640 PPM1GO15355 546 aaPredicted RBP23.07■■□□□ 1.28
SCARB2-223ENST00000640640 NBR1Q14596 966 aa23.07■■□□□ 1.28
SCARB2-223ENST00000640640 HNRNPMP52272 730 aaKnown RBP eCLIP23.06■■□□□ 1.28
SCARB2-223ENST00000640640 TNNT2P45379 298 aaPredicted RBP23.05■■□□□ 1.28
SCARB2-223ENST00000640640 GGT6Q6P531 493 aa23.05■■□□□ 1.28
SCARB2-223ENST00000640640 RAD54L2Q9Y4B4 1467 aa23.04■■□□□ 1.28
SCARB2-223ENST00000640640 C14orf37Q86TY3 774 aa23.02■■□□□ 1.28
SCARB2-223ENST00000640640 MYH16Q9H6N6 1097 aa23.01■■□□□ 1.27
SCARB2-223ENST00000640640 NUDCQ9Y266 331 aa23.01■■□□□ 1.27
SCARB2-223ENST00000640640 GAPVD1Q14C86 1478 aa23.01■■□□□ 1.27
SCARB2-223ENST00000640640 RSPH4AQ5TD94 716 aa23.01■■□□□ 1.27
SCARB2-223ENST00000640640 KIF21BO75037 1637 aa22.97■■□□□ 1.27
SCARB2-223ENST00000640640 MAPK8IP3Q9UPT6 1336 aa22.97■■□□□ 1.27
SCARB2-223ENST00000640640 B4GALNT3Q6L9W6 998 aa22.97■■□□□ 1.27
SCARB2-223ENST00000640640 ROCK2O75116 1388 aaKnown RBP22.97■■□□□ 1.27
SCARB2-223ENST00000640640 PLEKHG5O94827 1062 aa22.96■■□□□ 1.27
SCARB2-223ENST00000640640 ZBTB7CA1YPR0 619 aa22.94■■□□□ 1.26
SCARB2-223ENST00000640640 SYNJ1O43426 1573 aa22.92■■□□□ 1.26
SCARB2-223ENST00000640640 KIF3BO15066 747 aa22.92■■□□□ 1.26
SCARB2-223ENST00000640640 CFTRP13569 1480 aa22.92■■□□□ 1.26
SCARB2-223ENST00000640640 KTN1Q86UP2 1357 aaKnown RBP22.91■■□□□ 1.26
SCARB2-223ENST00000640640 MLECQ14165 292 aa22.91■■□□□ 1.26
SCARB2-223ENST00000640640 FTSJ3Q8IY81 847 aaKnown RBP22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms