RNA–Protein interactions for RNA: ENST00000640141.1

KCNMA1-278, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-278ENST00000640141 SCAF1Q9H7N4 1312 aaKnown RBP24.37■■□□□ 1.49
KCNMA1-278ENST00000640141 PPP1R15AO75807 674 aaPredicted RBP24.37■■□□□ 1.49
KCNMA1-278ENST00000640141 GOLGA3Q08378 1498 aa24.34■■□□□ 1.49
KCNMA1-278ENST00000640141 HIRIP3Q9BW71 556 aaPredicted RBP24.32■■□□□ 1.48
KCNMA1-278ENST00000640141 MIER1Q8N108 512 aa24.29■■□□□ 1.48
KCNMA1-278ENST00000640141 CDCA8Q53HL2 280 aa24.25■■□□□ 1.47
KCNMA1-278ENST00000640141 CEP162Q5TB80 1403 aa24.25■■□□□ 1.47
KCNMA1-278ENST00000640141 RGL3Q3MIN7 710 aa24.24■■□□□ 1.47
KCNMA1-278ENST00000640141 CFDP1Q9UEE9 299 aaPredicted RBP24.24■■□□□ 1.47
KCNMA1-278ENST00000640141 C14orf37Q86TY3 774 aa24.24■■□□□ 1.47
KCNMA1-278ENST00000640141 EIF5BO60841 1220 aaKnown RBP24.23■■□□□ 1.47
KCNMA1-278ENST00000640141 WRNQ14191 1432 aaPredicted RBP eCLIP24.22■■□□□ 1.47
KCNMA1-278ENST00000640141 CFAP53Q96M91 514 aa24.22■■□□□ 1.47
KCNMA1-278ENST00000640141 A0A0G2JS52 829 aa24.22■■□□□ 1.47
KCNMA1-278ENST00000640141 ZBTB7CA1YPR0 619 aa24.21■■□□□ 1.47
KCNMA1-278ENST00000640141 KIF27Q86VH2 1401 aa24.19■■□□□ 1.46
KCNMA1-278ENST00000640141 IRX6P78412 446 aaPredicted RBP24.19■■□□□ 1.46
KCNMA1-278ENST00000640141 SENP3Q9H4L4 574 aaPredicted RBP24.17■■□□□ 1.46
KCNMA1-278ENST00000640141 NBR1Q14596 966 aa24.16■■□□□ 1.46
KCNMA1-278ENST00000640141 KNSTRNQ9Y448 316 aa24.15■■□□□ 1.46
KCNMA1-278ENST00000640141 BAZ1BQ9UIG0 1483 aaKnown RBP24.15■■□□□ 1.46
KCNMA1-278ENST00000640141 NACADO15069 1562 aa24.13■■□□□ 1.45
KCNMA1-278ENST00000640141 PLEKHG5O94827 1062 aa24.11■■□□□ 1.45
KCNMA1-278ENST00000640141 CARD11Q9BXL7 1154 aa24.1■■□□□ 1.45
KCNMA1-278ENST00000640141 BECN1Q14457 450 aa24.1■■□□□ 1.45
KCNMA1-278ENST00000640141 ARID4BQ4LE39 1312 aaPredicted RBP24.1■■□□□ 1.45
KCNMA1-278ENST00000640141 TNIKQ9UKE5 1360 aa24.09■■□□□ 1.45
KCNMA1-278ENST00000640141 CEP164Q9UPV0 1460 aa24.08■■□□□ 1.45
KCNMA1-278ENST00000640141 DDRGK1Q96HY6 314 aa24.07■■□□□ 1.44
KCNMA1-278ENST00000640141 ARXQ96QS3 562 aa24.07■■□□□ 1.44
KCNMA1-278ENST00000640141 HAP1P54257 671 aaPredicted RBP24.03■■□□□ 1.44
KCNMA1-278ENST00000640141 NCLP19338 710 aaKnown RBP24.01■■□□□ 1.43
KCNMA1-278ENST00000640141 PPM1GO15355 546 aaPredicted RBP24.01■■□□□ 1.43
KCNMA1-278ENST00000640141 NUDCQ9Y266 331 aa23.99■■□□□ 1.43
KCNMA1-278ENST00000640141 CDK11BP21127 795 aaKnown RBP23.98■■□□□ 1.43
KCNMA1-278ENST00000640141 ANP32EQ9BTT0 268 aa23.98■■□□□ 1.43
KCNMA1-278ENST00000640141 MAPK8IP3Q9UPT6 1336 aa23.97■■□□□ 1.43
KCNMA1-278ENST00000640141 GOLGA6L22H0YM25 854 aa23.97■■□□□ 1.43
KCNMA1-278ENST00000640141 GLIPR1L2Q4G1C9 344 aa23.96■■□□□ 1.43
KCNMA1-278ENST00000640141 POGKQ9P215 609 aa23.96■■□□□ 1.43
KCNMA1-278ENST00000640141 FTSJ3Q8IY81 847 aaKnown RBP23.95■■□□□ 1.43
KCNMA1-278ENST00000640141 CASC1Q6TDU7 716 aa23.92■■□□□ 1.42
KCNMA1-278ENST00000640141 ERCC6Q03468 1493 aa23.9■■□□□ 1.42
KCNMA1-278ENST00000640141 MYO15BQ96JP2 1530 aa23.9■■□□□ 1.42
KCNMA1-278ENST00000640141 CCNB3Q8WWL7 1395 aa23.89■■□□□ 1.42
KCNMA1-278ENST00000640141 NEUROD2Q15784 382 aa23.89■■□□□ 1.41
KCNMA1-278ENST00000640141 FHAD1B1AJZ9 1412 aa23.87■■□□□ 1.41
KCNMA1-278ENST00000640141 SUPT16HQ9Y5B9 1047 aaKnown RBP23.86■■□□□ 1.41
KCNMA1-278ENST00000640141 SIN3AQ96ST3 1273 aa23.86■■□□□ 1.41
KCNMA1-278ENST00000640141 LAS1LQ9Y4W2 734 aaKnown RBP23.85■■□□□ 1.41
KCNMA1-278ENST00000640141 SENP3-EIF4A1A0A087X0R7 540 aa23.85■■□□□ 1.41
KCNMA1-278ENST00000640141 CHMP4BQ9H444 224 aaKnown RBP23.84■■□□□ 1.41
KCNMA1-278ENST00000640141 TRIM44Q96DX7 344 aaPredicted RBP23.83■■□□□ 1.41
KCNMA1-278ENST00000640141 LMOD2Q6P5Q4 547 aa23.81■■□□□ 1.4
KCNMA1-278ENST00000640141 BAZ1AQ9NRL2 1556 aaPredicted RBP23.81■■□□□ 1.4
KCNMA1-278ENST00000640141 MS4A1P11836 297 aa23.8■■□□□ 1.4
KCNMA1-278ENST00000640141 PNNQ9H307 717 aaKnown RBP23.8■■□□□ 1.4
KCNMA1-278ENST00000640141 ZRSR1Q15695 479 aaKnown RBP23.79■■□□□ 1.4
KCNMA1-278ENST00000640141 KANK1Q14678 1352 aa23.78■■□□□ 1.4
KCNMA1-278ENST00000640141 TMF1P82094 1093 aa23.78■■□□□ 1.4
KCNMA1-278ENST00000640141 CARMIL1Q5VZK9 1371 aa23.77■■□□□ 1.4
KCNMA1-278ENST00000640141 TNNT2P45379 298 aaPredicted RBP23.76■■□□□ 1.39
KCNMA1-278ENST00000640141 PPP4R2Q9NY27 417 aa23.75■■□□□ 1.39
KCNMA1-278ENST00000640141 TIMELESSQ9UNS1 1208 aa23.75■■□□□ 1.39
KCNMA1-278ENST00000640141 CC2D1BQ5T0F9 858 aaKnown RBP23.75■■□□□ 1.39
KCNMA1-278ENST00000640141 FRAT1Q92837 279 aaPredicted RBP23.75■■□□□ 1.39
KCNMA1-278ENST00000640141 HDGFP51858 240 aaKnown RBP23.75■■□□□ 1.39
KCNMA1-278ENST00000640141 U2SURPO15042 1029 aaKnown RBP23.75■■□□□ 1.39
KCNMA1-278ENST00000640141 DCAF11Q8TEB1 546 aa23.74■■□□□ 1.39
KCNMA1-278ENST00000640141 CUX2O14529 1486 aa23.7■■□□□ 1.38
KCNMA1-278ENST00000640141 RGS3P49796 1198 aa23.68■■□□□ 1.38
KCNMA1-278ENST00000640141 EIF4G1Q04637 1599 aaKnown RBP23.67■■□□□ 1.38
KCNMA1-278ENST00000640141 PTMAP06454 111 aaKnown RBP23.66■■□□□ 1.38
KCNMA1-278ENST00000640141 OS9Q13438 667 aaPredicted RBP23.65■■□□□ 1.38
KCNMA1-278ENST00000640141 SRPK2P78362 688 aaKnown RBP23.62■■□□□ 1.37
KCNMA1-278ENST00000640141 NPHP1O15259 732 aa23.62■■□□□ 1.37
KCNMA1-278ENST00000640141 MORC1Q86VD1 984 aa23.59■■□□□ 1.37
KCNMA1-278ENST00000640141 MLECQ14165 292 aa23.58■■□□□ 1.36
KCNMA1-278ENST00000640141 FGD1P98174 961 aa23.57■■□□□ 1.36
KCNMA1-278ENST00000640141 CECR2Q9BXF3 1484 aa23.57■■□□□ 1.36
KCNMA1-278ENST00000640141 SETD5Q9C0A6 1442 aa23.56■■□□□ 1.36
KCNMA1-278ENST00000640141 SOGA1O94964 1423 aa23.56■■□□□ 1.36
KCNMA1-278ENST00000640141 KCNJ4P48050 445 aa23.55■■□□□ 1.36
KCNMA1-278ENST00000640141 TPRNQ4KMQ1 711 aa23.54■■□□□ 1.36
KCNMA1-278ENST00000640141 ARHGAP35Q9NRY4 1499 aa23.54■■□□□ 1.36
KCNMA1-278ENST00000640141 HSP90AB1P08238 724 aaKnown RBP23.54■■□□□ 1.36
KCNMA1-278ENST00000640141 CCER2I3L3R5 266 aa23.53■■□□□ 1.36
KCNMA1-278ENST00000640141 CARMIL2Q6F5E8 1435 aa23.53■■□□□ 1.36
KCNMA1-278ENST00000640141 PKD2Q13563 968 aa23.52■■□□□ 1.36
KCNMA1-278ENST00000640141 GGT6Q6P531 493 aa23.52■■□□□ 1.36
KCNMA1-278ENST00000640141 TRHP20396 242 aaPredicted RBP23.52■■□□□ 1.36
KCNMA1-278ENST00000640141 DNTTIP2Q5QJE6 756 aaKnown RBP23.51■■□□□ 1.35
KCNMA1-278ENST00000640141 VPS8Q8N3P4 1428 aa23.5■■□□□ 1.35
KCNMA1-278ENST00000640141 GOLGA2Q08379 1002 aa23.5■■□□□ 1.35
KCNMA1-278ENST00000640141 SOX12O15370 315 aa23.49■■□□□ 1.35
KCNMA1-278ENST00000640141 SAFB2Q14151 953 aaKnown RBP eCLIP23.49■■□□□ 1.35
KCNMA1-278ENST00000640141 HSPA5P11021 654 aaKnown RBP23.49■■□□□ 1.35
KCNMA1-278ENST00000640141 ERICH6BQ5W0A0 696 aa23.48■■□□□ 1.35
KCNMA1-278ENST00000640141 B4GALNT3Q6L9W6 998 aa23.48■■□□□ 1.35
KCNMA1-278ENST00000640141 HDGFL2Q7Z4V5 671 aaPredicted RBP23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms