RNA–Protein interactions for RNA: ENST00000639968.1

KCNMA1-274, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 4,126 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-274ENST00000639968 TOP2AP11388 1531 aaKnown RBP20.25■□□□□ 0.83
KCNMA1-274ENST00000639968 CCNB3Q8WWL7 1395 aa20.24■□□□□ 0.83
KCNMA1-274ENST00000639968 CHGAP10645 457 aaKnown RBP20.23■□□□□ 0.83
KCNMA1-274ENST00000639968 TSPY4P0CV99 314 aa20.22■□□□□ 0.83
KCNMA1-274ENST00000639968 TSPY10P0CW01 314 aa20.22■□□□□ 0.83
KCNMA1-274ENST00000639968 KCNH8Q96L42 1107 aa20.21■□□□□ 0.83
KCNMA1-274ENST00000639968 MRS2Q9HD23 443 aa20.21■□□□□ 0.83
KCNMA1-274ENST00000639968 SENP3Q9H4L4 574 aaPredicted RBP20.2■□□□□ 0.82
KCNMA1-274ENST00000639968 RAPGEF2Q9Y4G8 1499 aa20.19■□□□□ 0.82
KCNMA1-274ENST00000639968 BCL11AQ9H165 835 aa20.17■□□□□ 0.82
KCNMA1-274ENST00000639968 TDRD9Q8NDG6 1382 aaKnown RBP20.16■□□□□ 0.82
KCNMA1-274ENST00000639968 RGL3Q3MIN7 710 aa20.16■□□□□ 0.82
KCNMA1-274ENST00000639968 EIF4G2P78344 907 aaKnown RBP eCLIP20.15■□□□□ 0.82
KCNMA1-274ENST00000639968 ATAD2BQ9ULI0 1458 aa20.14■□□□□ 0.82
KCNMA1-274ENST00000639968 SMARCA4P51532 1647 aa20.13■□□□□ 0.81
KCNMA1-274ENST00000639968 CFDP1Q9UEE9 299 aaPredicted RBP20.12■□□□□ 0.81
KCNMA1-274ENST00000639968 TMC1Q8TDI8 760 aa20.11■□□□□ 0.81
KCNMA1-274ENST00000639968 FOXD1Q16676 465 aa20.09■□□□□ 0.81
KCNMA1-274ENST00000639968 PLEKHD1A6NEE1 506 aa20.08■□□□□ 0.81
KCNMA1-274ENST00000639968 SMARCA2P51531 1590 aa20.08■□□□□ 0.8
KCNMA1-274ENST00000639968 NPM2Q86SE8 214 aaKnown RBP20.06■□□□□ 0.8
KCNMA1-274ENST00000639968 RTL5Q5HYW3 569 aaPredicted RBP20.05■□□□□ 0.8
KCNMA1-274ENST00000639968 EIF4G1Q04637 1599 aaKnown RBP20.02■□□□□ 0.8
KCNMA1-274ENST00000639968 RAB3GAP2Q9H2M9 1393 aa20.01■□□□□ 0.79
KCNMA1-274ENST00000639968 PLPPR3Q6T4P5 718 aa20■□□□□ 0.79
KCNMA1-274ENST00000639968 CANXP27824 592 aaKnown RBP20■□□□□ 0.79
KCNMA1-274ENST00000639968 FHAD1B1AJZ9 1412 aa19.99■□□□□ 0.79
KCNMA1-274ENST00000639968 SUPT16HQ9Y5B9 1047 aaKnown RBP19.97■□□□□ 0.79
KCNMA1-274ENST00000639968 FHOD3Q2V2M9 1422 aa19.96■□□□□ 0.79
KCNMA1-274ENST00000639968 CADPSQ9ULU8 1353 aa19.95■□□□□ 0.78
KCNMA1-274ENST00000639968 SETD5Q9C0A6 1442 aa19.94■□□□□ 0.78
KCNMA1-274ENST00000639968 NPM1P06748 294 aaKnown RBP eCLIP19.94■□□□□ 0.78
KCNMA1-274ENST00000639968 CCDC136Q96JN2 1154 aa19.91■□□□□ 0.78
KCNMA1-274ENST00000639968 CARD11Q9BXL7 1154 aa19.89■□□□□ 0.77
KCNMA1-274ENST00000639968 ERCC6Q03468 1493 aa19.88■□□□□ 0.77
KCNMA1-274ENST00000639968 SLC24A1O60721 1099 aa19.87■□□□□ 0.77
KCNMA1-274ENST00000639968 STAG3Q9UJ98 1225 aa19.86■□□□□ 0.77
KCNMA1-274ENST00000639968 ARHGAP35Q9NRY4 1499 aa19.84■□□□□ 0.77
KCNMA1-274ENST00000639968 ANP32AP39687 249 aaKnown RBP19.82■□□□□ 0.76
KCNMA1-274ENST00000639968 DHX57Q6P158 1386 aaKnown RBP19.82■□□□□ 0.76
KCNMA1-274ENST00000639968 HSPA5P11021 654 aaKnown RBP19.81■□□□□ 0.76
KCNMA1-274ENST00000639968 DCAF11Q8TEB1 546 aa19.79■□□□□ 0.76
KCNMA1-274ENST00000639968 PPP1R15AO75807 674 aaPredicted RBP19.78■□□□□ 0.76
KCNMA1-274ENST00000639968 WDR43Q15061 677 aaKnown RBP eCLIP19.77■□□□□ 0.76
KCNMA1-274ENST00000639968 IGF1RP08069 1367 aa19.76■□□□□ 0.75
KCNMA1-274ENST00000639968 PKD2Q13563 968 aa19.75■□□□□ 0.75
KCNMA1-274ENST00000639968 MPHOSPH9Q99550 1183 aa19.75■□□□□ 0.75
KCNMA1-274ENST00000639968 PDS5BQ9NTI5 1447 aa19.73■□□□□ 0.75
KCNMA1-274ENST00000639968 NBR1Q14596 966 aa19.73■□□□□ 0.75
KCNMA1-274ENST00000639968 ESF1Q9H501 851 aaKnown RBP19.73■□□□□ 0.75
KCNMA1-274ENST00000639968 NEFMP07197 916 aa19.72■□□□□ 0.75
KCNMA1-274ENST00000639968 FMN1Q68DA7 1419 aa19.7■□□□□ 0.74
KCNMA1-274ENST00000639968 L3MBTL2Q969R5 705 aa19.7■□□□□ 0.74
KCNMA1-274ENST00000639968 RAD54L2Q9Y4B4 1467 aa19.7■□□□□ 0.74
KCNMA1-274ENST00000639968 CC2D1BQ5T0F9 858 aaKnown RBP19.7■□□□□ 0.74
KCNMA1-274ENST00000639968 FANCD2Q9BXW9 1451 aa19.7■□□□□ 0.74
KCNMA1-274ENST00000639968 B4GALNT3Q6L9W6 998 aa19.69■□□□□ 0.74
KCNMA1-274ENST00000639968 TIMELESSQ9UNS1 1208 aa19.68■□□□□ 0.74
KCNMA1-274ENST00000639968 SYNJ1O43426 1573 aa19.65■□□□□ 0.74
KCNMA1-274ENST00000639968 TNNT2P45379 298 aaPredicted RBP19.65■□□□□ 0.74
KCNMA1-274ENST00000639968 FGD5Q6ZNL6 1462 aa19.65■□□□□ 0.74
KCNMA1-274ENST00000639968 NEUROD2Q15784 382 aa19.64■□□□□ 0.73
KCNMA1-274ENST00000639968 ZBTB47Q9UFB7 747 aaPredicted RBP19.63■□□□□ 0.73
KCNMA1-274ENST00000639968 KIF21BO75037 1637 aa19.62■□□□□ 0.73
KCNMA1-274ENST00000639968 HNRNPMP52272 730 aaKnown RBP eCLIP19.61■□□□□ 0.73
KCNMA1-274ENST00000639968 KNSTRNQ9Y448 316 aa19.6■□□□□ 0.73
KCNMA1-274ENST00000639968 PLEKHG5O94827 1062 aa19.59■□□□□ 0.73
KCNMA1-274ENST00000639968 ARAP1Q96P48 1450 aa19.58■□□□□ 0.73
KCNMA1-274ENST00000639968 PHLDB1Q86UU1 1377 aa19.58■□□□□ 0.73
KCNMA1-274ENST00000639968 NUP155O75694 1391 aa19.58■□□□□ 0.72
KCNMA1-274ENST00000639968 JPH4Q96JJ6 628 aa19.57■□□□□ 0.72
KCNMA1-274ENST00000639968 CCER2I3L3R5 266 aa19.56■□□□□ 0.72
KCNMA1-274ENST00000639968 ZNF644Q9H582 1327 aaPredicted RBP19.55■□□□□ 0.72
KCNMA1-274ENST00000639968 NCAPD3P42695 1498 aa19.54■□□□□ 0.72
KCNMA1-274ENST00000639968 PPM1GO15355 546 aaPredicted RBP19.52■□□□□ 0.72
KCNMA1-274ENST00000639968 SAFB2Q14151 953 aaKnown RBP eCLIP19.5■□□□□ 0.71
KCNMA1-274ENST00000639968 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.49■□□□□ 0.71
KCNMA1-274ENST00000639968 DNAJC5BQ9UF47 199 aa19.49■□□□□ 0.71
KCNMA1-274ENST00000639968 PPP4R2Q9NY27 417 aa19.48■□□□□ 0.71
KCNMA1-274ENST00000639968 NESP48681 1621 aa19.48■□□□□ 0.71
KCNMA1-274ENST00000639968 GGT6Q6P531 493 aa19.48■□□□□ 0.71
KCNMA1-274ENST00000639968 CARMIL2Q6F5E8 1435 aa19.46■□□□□ 0.71
KCNMA1-274ENST00000639968 ARXQ96QS3 562 aa19.44■□□□□ 0.7
KCNMA1-274ENST00000639968 AQRO60306 1485 aaKnown RBP eCLIP19.43■□□□□ 0.7
KCNMA1-274ENST00000639968 GAPVD1Q14C86 1478 aa19.42■□□□□ 0.7
KCNMA1-274ENST00000639968 TMF1P82094 1093 aa19.41■□□□□ 0.7
KCNMA1-274ENST00000639968 ANKRD30AQ9BXX3 1397 aa19.41■□□□□ 0.7
KCNMA1-274ENST00000639968 CCDC18Q5T9S5 1454 aa19.4■□□□□ 0.7
KCNMA1-274ENST00000639968 MLECQ14165 292 aa19.4■□□□□ 0.7
KCNMA1-274ENST00000639968 RBM19Q9Y4C8 960 aaKnown RBP19.4■□□□□ 0.7
KCNMA1-274ENST00000639968 CFTRP13569 1480 aa19.4■□□□□ 0.7
KCNMA1-274ENST00000639968 RGS3P49796 1198 aa19.4■□□□□ 0.7
KCNMA1-274ENST00000639968 ST20-MTHFSA0A0A6YYL1 179 aa19.39■□□□□ 0.69
KCNMA1-274ENST00000639968 CDCA8Q53HL2 280 aa19.39■□□□□ 0.69
KCNMA1-274ENST00000639968 FRAT1Q92837 279 aaPredicted RBP19.39■□□□□ 0.69
KCNMA1-274ENST00000639968 PRXQ9BXM0 1461 aa19.38■□□□□ 0.69
KCNMA1-274ENST00000639968 TSHZ2Q9NRE2 1034 aa19.38■□□□□ 0.69
KCNMA1-274ENST00000639968 ROCK2O75116 1388 aaKnown RBP19.37■□□□□ 0.69
KCNMA1-274ENST00000639968 CUX1P39880 1505 aa19.37■□□□□ 0.69
KCNMA1-274ENST00000639968 LRRC9Q6ZRR7 1453 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms