RNA–Protein interactions for RNA: ENST00000639895.1

SPIN3-231, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 4,234 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-231ENST00000639895 WIZO95785 1651 aa15.36■□□□□ 0.05
SPIN3-231ENST00000639895 NAP1L5Q96NT1 182 aaPredicted RBP15.36■□□□□ 0.05
SPIN3-231ENST00000639895 TNIKQ9UKE5 1360 aa15.35■□□□□ 0.05
SPIN3-231ENST00000639895 PPM1GO15355 546 aaPredicted RBP15.35■□□□□ 0.05
SPIN3-231ENST00000639895 FAM50AQ14320 339 aaKnown RBP15.33■□□□□ 0.04
SPIN3-231ENST00000639895 GOLGA3Q08378 1498 aa15.32■□□□□ 0.04
SPIN3-231ENST00000639895 UBE2Q2Q8WVN8 375 aa15.31■□□□□ 0.04
SPIN3-231ENST00000639895 WRNQ14191 1432 aaPredicted RBP eCLIP15.29■□□□□ 0.04
SPIN3-231ENST00000639895 ABCC8Q09428 1581 aa15.27■□□□□ 0.04
SPIN3-231ENST00000639895 CLIP1P30622 1438 aa15.27■□□□□ 0.03
SPIN3-231ENST00000639895 IPO9Q96P70 1041 aaKnown RBP15.27■□□□□ 0.03
SPIN3-231ENST00000639895 SOGA1O94964 1423 aa15.27■□□□□ 0.03
SPIN3-231ENST00000639895 CCDC88BA6NC98 1476 aa15.26■□□□□ 0.03
SPIN3-231ENST00000639895 MRS2Q9HD23 443 aa15.24■□□□□ 0.03
SPIN3-231ENST00000639895 ARID4BQ4LE39 1312 aaPredicted RBP15.23■□□□□ 0.03
SPIN3-231ENST00000639895 SENP3-EIF4A1A0A087X0R7 540 aa15.22■□□□□ 0.03
SPIN3-231ENST00000639895 PODXL2Q9NZ53 605 aa15.22■□□□□ 0.03
SPIN3-231ENST00000639895 TOP2AP11388 1531 aaKnown RBP15.22■□□□□ 0.03
SPIN3-231ENST00000639895 RSPH6AQ9H0K4 717 aa15.2■□□□□ 0.02
SPIN3-231ENST00000639895 CEP164Q9UPV0 1460 aa15.2■□□□□ 0.02
SPIN3-231ENST00000639895 PAK3O75914 559 aaPredicted RBP15.2■□□□□ 0.02
SPIN3-231ENST00000639895 DDRGK1Q96HY6 314 aa15.18■□□□□ 0.02
SPIN3-231ENST00000639895 HSP90AA1P07900 732 aaKnown RBP15.16■□□□□ 0.02
SPIN3-231ENST00000639895 CCER2I3L3R5 266 aa15.15■□□□□ 0.02
SPIN3-231ENST00000639895 BRPF3Q9ULD4 1205 aa15.15■□□□□ 0.02
SPIN3-231ENST00000639895 HSP90AA2PQ14568 343 aaPredicted RBP15.14■□□□□ 0.01
SPIN3-231ENST00000639895 BAZ1BQ9UIG0 1483 aaKnown RBP15.13■□□□□ 0.01
SPIN3-231ENST00000639895 A0A0U1RQG5 324 aaPredicted RBP15.13■□□□□ 0.01
SPIN3-231ENST00000639895 TONSLQ96HA7 1378 aa15.12■□□□□ 0.01
SPIN3-231ENST00000639895 SMARCA4P51532 1647 aa15.11■□□□□ 0.01
SPIN3-231ENST00000639895 PNNQ9H307 717 aaKnown RBP15.1■□□□□ 0.01
SPIN3-231ENST00000639895 USP35Q9P2H5 1018 aa15.09■□□□□ 0.01
SPIN3-231ENST00000639895 GSE1Q14687 1217 aa15.09■□□□□ 0.01
SPIN3-231ENST00000639895 SIN3AQ96ST3 1273 aa15.07■□□□□ 0
SPIN3-231ENST00000639895 TRIM44Q96DX7 344 aaPredicted RBP15.06■□□□□ 0
SPIN3-231ENST00000639895 ANP32BQ92688 251 aaKnown RBP15.05■□□□□ -0
SPIN3-231ENST00000639895 SMARCA2P51531 1590 aa15.02■□□□□ -0
SPIN3-231ENST00000639895 VPS8Q8N3P4 1428 aa15.02■□□□□ -0
SPIN3-231ENST00000639895 ZNF326Q5BKZ1 582 aaKnown RBP15.02□□□□□ -0.01
SPIN3-231ENST00000639895 RUSC2Q8N2Y8 1516 aa15.01□□□□□ -0.01
SPIN3-231ENST00000639895 P3H3Q8IVL6 736 aa15□□□□□ -0.01
SPIN3-231ENST00000639895 TMC1Q8TDI8 760 aa14.98□□□□□ -0.01
SPIN3-231ENST00000639895 ARID3AQ99856 593 aa14.96□□□□□ -0.01
SPIN3-231ENST00000639895 TNNT2P45379 298 aaPredicted RBP14.95□□□□□ -0.02
SPIN3-231ENST00000639895 SLC4A3P48751 1232 aa14.95□□□□□ -0.02
SPIN3-231ENST00000639895 KIF27Q86VH2 1401 aa14.95□□□□□ -0.02
SPIN3-231ENST00000639895 L1TD1Q5T7N2 865 aaKnown RBP14.94□□□□□ -0.02
SPIN3-231ENST00000639895 ZMYND15Q9H091 742 aa14.94□□□□□ -0.02
SPIN3-231ENST00000639895 UPF2Q9HAU5 1272 aaKnown RBP14.94□□□□□ -0.02
SPIN3-231ENST00000639895 AMER1Q5JTC6 1135 aaPredicted RBP14.93□□□□□ -0.02
SPIN3-231ENST00000639895 SLC24A1O60721 1099 aa14.92□□□□□ -0.02
SPIN3-231ENST00000639895 BECN1Q14457 450 aa14.9□□□□□ -0.02
SPIN3-231ENST00000639895 FRAT1Q92837 279 aaPredicted RBP14.9□□□□□ -0.02
SPIN3-231ENST00000639895 TCERG1O14776 1098 aaKnown RBP14.9□□□□□ -0.02
SPIN3-231ENST00000639895 RGS3P49796 1198 aa14.88□□□□□ -0.03
SPIN3-231ENST00000639895 GZF1Q9H116 711 aaPredicted RBP14.88□□□□□ -0.03
SPIN3-231ENST00000639895 EIF4G2P78344 907 aaKnown RBP eCLIP14.88□□□□□ -0.03
SPIN3-231ENST00000639895 CANXP27824 592 aaKnown RBP14.87□□□□□ -0.03
SPIN3-231ENST00000639895 DHX57Q6P158 1386 aaKnown RBP14.87□□□□□ -0.03
SPIN3-231ENST00000639895 PDE4AP27815 886 aa14.87□□□□□ -0.03
SPIN3-231ENST00000639895 ATAD2BQ9ULI0 1458 aa14.87□□□□□ -0.03
SPIN3-231ENST00000639895 RAPGEF2Q9Y4G8 1499 aa14.87□□□□□ -0.03
SPIN3-231ENST00000639895 PLEKHG5O94827 1062 aa14.87□□□□□ -0.03
SPIN3-231ENST00000639895 NFKBIBQ15653 356 aa14.86□□□□□ -0.03
SPIN3-231ENST00000639895 SLKQ9H2G2 1235 aaPredicted RBP14.83□□□□□ -0.04
SPIN3-231ENST00000639895 FAM43AQ8N2R8 423 aa14.82□□□□□ -0.04
SPIN3-231ENST00000639895 CDK11BP21127 795 aaKnown RBP14.81□□□□□ -0.04
SPIN3-231ENST00000639895 CCNB3Q8WWL7 1395 aa14.81□□□□□ -0.04
SPIN3-231ENST00000639895 KANK4Q5T7N3 995 aaPredicted RBP14.81□□□□□ -0.04
SPIN3-231ENST00000639895 GOLGA6L3A6NEY3 463 aa14.78□□□□□ -0.04
SPIN3-231ENST00000639895 SPRYD3Q8NCJ5 442 aa14.77□□□□□ -0.05
SPIN3-231ENST00000639895 NCLP19338 710 aaKnown RBP14.75□□□□□ -0.05
SPIN3-231ENST00000639895 NUDCQ9Y266 331 aa14.74□□□□□ -0.05
SPIN3-231ENST00000639895 CUX2O14529 1486 aa14.74□□□□□ -0.05
SPIN3-231ENST00000639895 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.74□□□□□ -0.05
SPIN3-231ENST00000639895 KIF21BO75037 1637 aa14.73□□□□□ -0.05
SPIN3-231ENST00000639895 DNTTIP2Q5QJE6 756 aaKnown RBP14.73□□□□□ -0.05
SPIN3-231ENST00000639895 MYH16Q9H6N6 1097 aa14.73□□□□□ -0.05
SPIN3-231ENST00000639895 PPP1R15AO75807 674 aaPredicted RBP14.72□□□□□ -0.05
SPIN3-231ENST00000639895 RRP9O43818 475 aaKnown RBP14.72□□□□□ -0.05
SPIN3-231ENST00000639895 MSNP26038 577 aaKnown RBP14.72□□□□□ -0.05
SPIN3-231ENST00000639895 SYNJ1O43426 1573 aa14.72□□□□□ -0.05
SPIN3-231ENST00000639895 FRAT2O75474 233 aaPredicted RBP14.71□□□□□ -0.05
SPIN3-231ENST00000639895 MTUS2Q5JR59 1369 aa14.71□□□□□ -0.05
SPIN3-231ENST00000639895 CARMIL1Q5VZK9 1371 aa14.7□□□□□ -0.06
SPIN3-231ENST00000639895 EXOC6Q8TAG9 804 aa14.68□□□□□ -0.06
SPIN3-231ENST00000639895 HSPA5P11021 654 aaKnown RBP14.68□□□□□ -0.06
SPIN3-231ENST00000639895 FHAD1B1AJZ9 1412 aa14.67□□□□□ -0.06
SPIN3-231ENST00000639895 EIF4G1Q04637 1599 aaKnown RBP14.67□□□□□ -0.06
SPIN3-231ENST00000639895 FAM13BQ9NYF5 915 aa14.67□□□□□ -0.06
SPIN3-231ENST00000639895 RAB3GAP2Q9H2M9 1393 aa14.67□□□□□ -0.06
SPIN3-231ENST00000639895 ZBED9Q6R2W3 1325 aa14.67□□□□□ -0.06
SPIN3-231ENST00000639895 RCAN3Q9UKA8 241 aa14.67□□□□□ -0.06
SPIN3-231ENST00000639895 ZBTB7CA1YPR0 619 aa14.66□□□□□ -0.06
SPIN3-231ENST00000639895 ARID3CA6NKF2 412 aa14.66□□□□□ -0.06
SPIN3-231ENST00000639895 C11orf95C9JLR9 678 aaPredicted RBP14.65□□□□□ -0.07
SPIN3-231ENST00000639895 PTMAP06454 111 aaKnown RBP14.65□□□□□ -0.07
SPIN3-231ENST00000639895 CHIC2Q9UKJ5 165 aa14.63□□□□□ -0.07
SPIN3-231ENST00000639895 SETD5Q9C0A6 1442 aa14.63□□□□□ -0.07
SPIN3-231ENST00000639895 GOLGA6L22H0YM25 854 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms