RNA–Protein interactions for RNA: ENST00000639895.1

SPIN3-231, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 4,234 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-231ENST00000639895 NISCHQ9Y2I1 1504 aa19.96■□□□□ 0.79
SPIN3-231ENST00000639895 PELP1Q8IZL8 1130 aaKnown RBP19.08■□□□□ 0.64
SPIN3-231ENST00000639895 MYT1Q01538 1121 aa18.65■□□□□ 0.58
SPIN3-231ENST00000639895 PCGF6Q9BYE7 350 aa18.53■□□□□ 0.56
SPIN3-231ENST00000639895 HRCP23327 699 aa18.47■□□□□ 0.55
SPIN3-231ENST00000639895 SUPT5HO00267 1087 aaKnown RBP18.32■□□□□ 0.52
SPIN3-231ENST00000639895 PPARGC1BQ86YN6 1023 aaKnown RBP18.26■□□□□ 0.51
SPIN3-231ENST00000639895 DCAF8L2P0C7V8 631 aa17.99■□□□□ 0.47
SPIN3-231ENST00000639895 SHROOM4Q9ULL8 1493 aa17.96■□□□□ 0.47
SPIN3-231ENST00000639895 CENPBP07199 599 aaPredicted RBP17.9■□□□□ 0.46
SPIN3-231ENST00000639895 ZEB1P37275 1124 aaPredicted RBP17.77■□□□□ 0.43
SPIN3-231ENST00000639895 SCAF1Q9H7N4 1312 aaKnown RBP17.61■□□□□ 0.41
SPIN3-231ENST00000639895 YTHDC1Q96MU7 727 aaKnown RBP17.55■□□□□ 0.4
SPIN3-231ENST00000639895 EHMT2Q96KQ7 1210 aa17.53■□□□□ 0.4
SPIN3-231ENST00000639895 GTF3C3Q9Y5Q9 886 aa17.52■□□□□ 0.4
SPIN3-231ENST00000639895 TRIM26Q12899 539 aaPredicted RBP17.47■□□□□ 0.39
SPIN3-231ENST00000639895 ACIN1Q9UKV3 1341 aaKnown RBP17.37■□□□□ 0.37
SPIN3-231ENST00000639895 CCER1Q8TC90 406 aaPredicted RBP17.36■□□□□ 0.37
SPIN3-231ENST00000639895 TTBK1Q5TCY1 1321 aaPredicted RBP17.27■□□□□ 0.36
SPIN3-231ENST00000639895 LOC105371045A0A1W2PR82 267 aa17.23■□□□□ 0.35
SPIN3-231ENST00000639895 ERICH6Q7L0X2 663 aa17.22■□□□□ 0.35
SPIN3-231ENST00000639895 CHIC1Q5VXU3 224 aa17.2■□□□□ 0.34
SPIN3-231ENST00000639895 NEUROD1Q13562 356 aa17.2■□□□□ 0.34
SPIN3-231ENST00000639895 FAM9AQ8IZU1 332 aaPredicted RBP17.18■□□□□ 0.34
SPIN3-231ENST00000639895 DIEXFQ68CQ4 756 aaKnown RBP17.15■□□□□ 0.34
SPIN3-231ENST00000639895 BCL11AQ9H165 835 aa16.97■□□□□ 0.31
SPIN3-231ENST00000639895 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.95■□□□□ 0.3
SPIN3-231ENST00000639895 NEFLP07196 543 aa16.8■□□□□ 0.28
SPIN3-231ENST00000639895 ZCCHC6Q5VYS8 1495 aaKnown RBP16.78■□□□□ 0.28
SPIN3-231ENST00000639895 TRIM41Q8WV44 630 aa16.74■□□□□ 0.27
SPIN3-231ENST00000639895 ANP32EQ9BTT0 268 aa16.71■□□□□ 0.27
SPIN3-231ENST00000639895 BCANQ96GW7 911 aa16.71■□□□□ 0.26
SPIN3-231ENST00000639895 CCDC180Q9P1Z9 1646 aa16.63■□□□□ 0.25
SPIN3-231ENST00000639895 DCAF1Q9Y4B6 1507 aa16.59■□□□□ 0.25
SPIN3-231ENST00000639895 MYO15BQ96JP2 1530 aa16.59■□□□□ 0.25
SPIN3-231ENST00000639895 ZNF316A6NFI3 1004 aaPredicted RBP16.56■□□□□ 0.24
SPIN3-231ENST00000639895 APLP2Q06481 763 aa16.46■□□□□ 0.23
SPIN3-231ENST00000639895 CSRNP3Q8WYN3 585 aa16.46■□□□□ 0.22
SPIN3-231ENST00000639895 RTL5Q5HYW3 569 aaPredicted RBP16.39■□□□□ 0.21
SPIN3-231ENST00000639895 MIER1Q8N108 512 aa16.38■□□□□ 0.21
SPIN3-231ENST00000639895 PRKCSHP14314 528 aaPredicted RBP16.36■□□□□ 0.21
SPIN3-231ENST00000639895 HNRNPUL2Q1KMD3 747 aaKnown RBP16.36■□□□□ 0.21
SPIN3-231ENST00000639895 EIF5BO60841 1220 aaKnown RBP16.31■□□□□ 0.2
SPIN3-231ENST00000639895 CLSPNQ9HAW4 1339 aa16.3■□□□□ 0.2
SPIN3-231ENST00000639895 FKBP8Q14318 412 aa16.28■□□□□ 0.2
SPIN3-231ENST00000639895 CDK11AQ9UQ88 783 aaPredicted RBP16.23■□□□□ 0.19
SPIN3-231ENST00000639895 SUPT16HQ9Y5B9 1047 aaKnown RBP16.22■□□□□ 0.19
SPIN3-231ENST00000639895 UBTFP17480 764 aaKnown RBP16.21■□□□□ 0.18
SPIN3-231ENST00000639895 RANGAP1P46060 587 aaPredicted RBP16.2■□□□□ 0.18
SPIN3-231ENST00000639895 TSHZ2Q9NRE2 1034 aa16.18■□□□□ 0.18
SPIN3-231ENST00000639895 NBR1Q14596 966 aa16.16■□□□□ 0.18
SPIN3-231ENST00000639895 ITGAEP38570 1179 aa16.15■□□□□ 0.18
SPIN3-231ENST00000639895 MYT1LQ9UL68 1186 aa16.14■□□□□ 0.17
SPIN3-231ENST00000639895 ABCC9O60706 1549 aa16.09■□□□□ 0.17
SPIN3-231ENST00000639895 SCRIBQ14160 1630 aa16.08■□□□□ 0.17
SPIN3-231ENST00000639895 RTN4Q9NQC3 1192 aaKnown RBP16.05■□□□□ 0.16
SPIN3-231ENST00000639895 RBM19Q9Y4C8 960 aaKnown RBP16.01■□□□□ 0.15
SPIN3-231ENST00000639895 DEKP35659 375 aaKnown RBP16■□□□□ 0.15
SPIN3-231ENST00000639895 DAXXQ9UER7 740 aaPredicted RBP15.97■□□□□ 0.15
SPIN3-231ENST00000639895 RSF1Q96T23 1441 aaPredicted RBP15.94■□□□□ 0.14
SPIN3-231ENST00000639895 CCDC136Q96JN2 1154 aa15.94■□□□□ 0.14
SPIN3-231ENST00000639895 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.91■□□□□ 0.14
SPIN3-231ENST00000639895 TRIM52Q96A61 297 aa15.89■□□□□ 0.14
SPIN3-231ENST00000639895 ANP32AP39687 249 aaKnown RBP15.89■□□□□ 0.13
SPIN3-231ENST00000639895 ANO8Q9HCE9 1232 aaPredicted RBP15.87■□□□□ 0.13
SPIN3-231ENST00000639895 GLIPR1L2Q4G1C9 344 aa15.86■□□□□ 0.13
SPIN3-231ENST00000639895 IRX6P78412 446 aaPredicted RBP15.85■□□□□ 0.13
SPIN3-231ENST00000639895 ANP32CO43423 234 aa15.82■□□□□ 0.12
SPIN3-231ENST00000639895 NPM2Q86SE8 214 aaKnown RBP15.8■□□□□ 0.12
SPIN3-231ENST00000639895 CNGB1Q14028 1251 aaPredicted RBP15.78■□□□□ 0.12
SPIN3-231ENST00000639895 ZBTB47Q9UFB7 747 aaPredicted RBP15.77■□□□□ 0.12
SPIN3-231ENST00000639895 DDX10Q13206 875 aaKnown RBP15.75■□□□□ 0.11
SPIN3-231ENST00000639895 RB1CC1Q8TDY2 1594 aa15.72■□□□□ 0.11
SPIN3-231ENST00000639895 HNRNPUQ00839 825 aaKnown RBP eCLIP15.69■□□□□ 0.1
SPIN3-231ENST00000639895 NACADO15069 1562 aa15.67■□□□□ 0.1
SPIN3-231ENST00000639895 NOP58Q9Y2X3 529 aaKnown RBP15.67■□□□□ 0.1
SPIN3-231ENST00000639895 PABPN1Q86U42 306 aaKnown RBP eCLIP15.66■□□□□ 0.1
SPIN3-231ENST00000639895 SALL2Q9Y467 1007 aaPredicted RBP15.65■□□□□ 0.1
SPIN3-231ENST00000639895 ERICH6BQ5W0A0 696 aa15.62■□□□□ 0.09
SPIN3-231ENST00000639895 CECR2Q9BXF3 1484 aa15.61■□□□□ 0.09
SPIN3-231ENST00000639895 ATP1B4Q9UN42 357 aaPredicted RBP15.59■□□□□ 0.09
SPIN3-231ENST00000639895 NEFMP07197 916 aa15.58■□□□□ 0.09
SPIN3-231ENST00000639895 POLR3GLQ9BT43 218 aa15.57■□□□□ 0.08
SPIN3-231ENST00000639895 LAS1LQ9Y4W2 734 aaKnown RBP15.54■□□□□ 0.08
SPIN3-231ENST00000639895 MROH2BQ7Z745 1585 aa15.51■□□□□ 0.07
SPIN3-231ENST00000639895 HIRIP3Q9BW71 556 aaPredicted RBP15.5■□□□□ 0.07
SPIN3-231ENST00000639895 B4GALNT3Q6L9W6 998 aa15.47■□□□□ 0.07
SPIN3-231ENST00000639895 ARXQ96QS3 562 aa15.47■□□□□ 0.07
SPIN3-231ENST00000639895 KCNH8Q96L42 1107 aa15.47■□□□□ 0.07
SPIN3-231ENST00000639895 BAZ1AQ9NRL2 1556 aaPredicted RBP15.47■□□□□ 0.07
SPIN3-231ENST00000639895 FANCIQ9NVI1 1328 aa15.45■□□□□ 0.06
SPIN3-231ENST00000639895 IL27Q8NEV9 243 aa15.43■□□□□ 0.06
SPIN3-231ENST00000639895 FAM9BQ8IZU0 186 aa15.43■□□□□ 0.06
SPIN3-231ENST00000639895 PPP4R2Q9NY27 417 aa15.43■□□□□ 0.06
SPIN3-231ENST00000639895 CEP162Q5TB80 1403 aa15.42■□□□□ 0.06
SPIN3-231ENST00000639895 PKNOX2Q96KN3 472 aa15.41■□□□□ 0.06
SPIN3-231ENST00000639895 MSH5O43196 834 aa15.4■□□□□ 0.06
SPIN3-231ENST00000639895 EEA1Q15075 1411 aa15.4■□□□□ 0.06
SPIN3-231ENST00000639895 TIMELESSQ9UNS1 1208 aa15.38■□□□□ 0.05
SPIN3-231ENST00000639895 VSIG10Q8N0Z9 540 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 194 ms