RNA–Protein interactions for RNA: ENST00000639406.1

KCNMA1-259, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 5,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-259ENST00000639406 VSIG10Q8N0Z9 540 aa14.42□□□□□ -0.1
KCNMA1-259ENST00000639406 RBM19Q9Y4C8 960 aaKnown RBP14.41□□□□□ -0.1
KCNMA1-259ENST00000639406 CCDC180Q9P1Z9 1646 aa14.39□□□□□ -0.11
KCNMA1-259ENST00000639406 MSNP26038 577 aaKnown RBP14.39□□□□□ -0.11
KCNMA1-259ENST00000639406 TNNT3P45378 269 aaPredicted RBP14.38□□□□□ -0.11
KCNMA1-259ENST00000639406 AEBP2Q6ZN18 517 aaPredicted RBP14.38□□□□□ -0.11
KCNMA1-259ENST00000639406 RB1CC1Q8TDY2 1594 aa14.37□□□□□ -0.11
KCNMA1-259ENST00000639406 MRS2Q9HD23 443 aa14.35□□□□□ -0.11
KCNMA1-259ENST00000639406 PNNQ9H307 717 aaKnown RBP14.35□□□□□ -0.11
KCNMA1-259ENST00000639406 HSP90AA2PQ14568 343 aaPredicted RBP14.35□□□□□ -0.11
KCNMA1-259ENST00000639406 ARID3AQ99856 593 aa14.34□□□□□ -0.11
KCNMA1-259ENST00000639406 PPP4R2Q9NY27 417 aa14.34□□□□□ -0.11
KCNMA1-259ENST00000639406 CHAF1AQ13111 956 aaPredicted RBP14.34□□□□□ -0.11
KCNMA1-259ENST00000639406 TMC1Q8TDI8 760 aa14.33□□□□□ -0.12
KCNMA1-259ENST00000639406 RSPH6AQ9H0K4 717 aa14.33□□□□□ -0.12
KCNMA1-259ENST00000639406 PRKCSHP14314 528 aaPredicted RBP14.32□□□□□ -0.12
KCNMA1-259ENST00000639406 TONSLQ96HA7 1378 aa14.31□□□□□ -0.12
KCNMA1-259ENST00000639406 PLPPR3Q6T4P5 718 aa14.27□□□□□ -0.13
KCNMA1-259ENST00000639406 TRHP20396 242 aaPredicted RBP14.27□□□□□ -0.13
KCNMA1-259ENST00000639406 PLCB2Q00722 1185 aa14.26□□□□□ -0.13
KCNMA1-259ENST00000639406 TSHZ2Q9NRE2 1034 aa14.26□□□□□ -0.13
KCNMA1-259ENST00000639406 PKNOX2Q96KN3 472 aa14.25□□□□□ -0.13
KCNMA1-259ENST00000639406 TPRNQ4KMQ1 711 aa14.23□□□□□ -0.13
KCNMA1-259ENST00000639406 PODXL2Q9NZ53 605 aa14.23□□□□□ -0.13
KCNMA1-259ENST00000639406 ZRSR1Q15695 479 aaKnown RBP14.22□□□□□ -0.13
KCNMA1-259ENST00000639406 GOLGA6L6A8MZA4 724 aa14.21□□□□□ -0.13
KCNMA1-259ENST00000639406 A0A0U1RQG5 324 aaPredicted RBP14.21□□□□□ -0.13
KCNMA1-259ENST00000639406 WDR43Q15061 677 aaKnown RBP eCLIP14.2□□□□□ -0.14
KCNMA1-259ENST00000639406 MYH16Q9H6N6 1097 aa14.2□□□□□ -0.14
KCNMA1-259ENST00000639406 B4GALNT3Q6L9W6 998 aa14.18□□□□□ -0.14
KCNMA1-259ENST00000639406 ZBTB7CA1YPR0 619 aa14.16□□□□□ -0.14
KCNMA1-259ENST00000639406 HSP90AB1P08238 724 aaKnown RBP14.15□□□□□ -0.14
KCNMA1-259ENST00000639406 TIMELESSQ9UNS1 1208 aa14.14□□□□□ -0.15
KCNMA1-259ENST00000639406 STAG3Q9UJ98 1225 aa14.14□□□□□ -0.15
KCNMA1-259ENST00000639406 NRDCO43847 1150 aa14.13□□□□□ -0.15
KCNMA1-259ENST00000639406 RGS3P49796 1198 aa14.12□□□□□ -0.15
KCNMA1-259ENST00000639406 HIRIP3Q9BW71 556 aaPredicted RBP14.12□□□□□ -0.15
KCNMA1-259ENST00000639406 GOLGA6L3A6NEY3 463 aa14.1□□□□□ -0.15
KCNMA1-259ENST00000639406 KIAA2012Q0VF49 1180 aa14.09□□□□□ -0.15
KCNMA1-259ENST00000639406 CASC1Q6TDU7 716 aa14.09□□□□□ -0.15
KCNMA1-259ENST00000639406 CALRP27797 417 aaKnown RBP14.08□□□□□ -0.16
KCNMA1-259ENST00000639406 HSCBQ8IWL3 235 aa14.08□□□□□ -0.16
KCNMA1-259ENST00000639406 DRC7Q8IY82 874 aa14.07□□□□□ -0.16
KCNMA1-259ENST00000639406 GZF1Q9H116 711 aaPredicted RBP14.07□□□□□ -0.16
KCNMA1-259ENST00000639406 IPO9Q96P70 1041 aaKnown RBP14.07□□□□□ -0.16
KCNMA1-259ENST00000639406 PTMSP20962 102 aa14.06□□□□□ -0.16
KCNMA1-259ENST00000639406 SPRYD3Q8NCJ5 442 aa14.06□□□□□ -0.16
KCNMA1-259ENST00000639406 ANO8Q9HCE9 1232 aaPredicted RBP14.06□□□□□ -0.16
KCNMA1-259ENST00000639406 NACADO15069 1562 aa14.05□□□□□ -0.16
KCNMA1-259ENST00000639406 SENP3-EIF4A1A0A087X0R7 540 aa14.01□□□□□ -0.17
KCNMA1-259ENST00000639406 APPP05067 770 aa14.01□□□□□ -0.17
KCNMA1-259ENST00000639406 ZNF771Q7L3S4 317 aaPredicted RBP14□□□□□ -0.17
KCNMA1-259ENST00000639406 USP35Q9P2H5 1018 aa14□□□□□ -0.17
KCNMA1-259ENST00000639406 SETQ01105 290 aaPredicted RBP14□□□□□ -0.17
KCNMA1-259ENST00000639406 GBP4Q96PP9 640 aa13.99□□□□□ -0.17
KCNMA1-259ENST00000639406 EIF4G2P78344 907 aaKnown RBP eCLIP13.98□□□□□ -0.17
KCNMA1-259ENST00000639406 GSE1Q14687 1217 aa13.97□□□□□ -0.17
KCNMA1-259ENST00000639406 ERCC6Q03468 1493 aa13.97□□□□□ -0.17
KCNMA1-259ENST00000639406 GOLGA6L1Q8N7Z2 621 aa13.96□□□□□ -0.18
KCNMA1-259ENST00000639406 SLKQ9H2G2 1235 aaPredicted RBP13.94□□□□□ -0.18
KCNMA1-259ENST00000639406 GOLGA6L4A6NEF3 574 aa13.94□□□□□ -0.18
KCNMA1-259ENST00000639406 FTSJ3Q8IY81 847 aaKnown RBP13.94□□□□□ -0.18
KCNMA1-259ENST00000639406 CHMP7Q8WUX9 453 aaPredicted RBP13.91□□□□□ -0.18
KCNMA1-259ENST00000639406 TCERG1O14776 1098 aaKnown RBP13.91□□□□□ -0.18
KCNMA1-259ENST00000639406 FAM13BQ9NYF5 915 aa13.89□□□□□ -0.19
KCNMA1-259ENST00000639406 NOC3LQ8WTT2 800 aaKnown RBP13.88□□□□□ -0.19
KCNMA1-259ENST00000639406 P3H3Q8IVL6 736 aa13.88□□□□□ -0.19
KCNMA1-259ENST00000639406 SCRIBQ14160 1630 aa13.88□□□□□ -0.19
KCNMA1-259ENST00000639406 C14orf37Q86TY3 774 aa13.87□□□□□ -0.19
KCNMA1-259ENST00000639406 HAP1P54257 671 aaPredicted RBP13.86□□□□□ -0.19
KCNMA1-259ENST00000639406 SYAP1Q96A49 352 aaPredicted RBP13.85□□□□□ -0.19
KCNMA1-259ENST00000639406 FANCIQ9NVI1 1328 aa13.85□□□□□ -0.19
KCNMA1-259ENST00000639406 ZNF777Q9ULD5 760 aaPredicted RBP13.85□□□□□ -0.19
KCNMA1-259ENST00000639406 FRAT1Q92837 279 aaPredicted RBP13.84□□□□□ -0.19
KCNMA1-259ENST00000639406 CCER2I3L3R5 266 aa13.83□□□□□ -0.2
KCNMA1-259ENST00000639406 KDM2AQ9Y2K7 1162 aa13.82□□□□□ -0.2
KCNMA1-259ENST00000639406 A0A0G2JS52 829 aa13.8□□□□□ -0.2
KCNMA1-259ENST00000639406 CALD1Q05682 793 aaKnown RBP13.8□□□□□ -0.2
KCNMA1-259ENST00000639406 ARID3CA6NKF2 412 aa13.79□□□□□ -0.2
KCNMA1-259ENST00000639406 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.78□□□□□ -0.2
KCNMA1-259ENST00000639406 TULP1O00294 542 aaPredicted RBP13.78□□□□□ -0.2
KCNMA1-259ENST00000639406 DCAF8L1A6NGE4 600 aa13.77□□□□□ -0.2
KCNMA1-259ENST00000639406 MCCP23508 829 aa13.77□□□□□ -0.2
KCNMA1-259ENST00000639406 TAOK2Q9UL54 1235 aa13.77□□□□□ -0.2
KCNMA1-259ENST00000639406 DDX11L8A8MPP1 907 aa13.77□□□□□ -0.21
KCNMA1-259ENST00000639406 MS4A1P11836 297 aa13.77□□□□□ -0.21
KCNMA1-259ENST00000639406 TEX35Q5T0J7 233 aa13.76□□□□□ -0.21
KCNMA1-259ENST00000639406 CHMP4BQ9H444 224 aaKnown RBP13.76□□□□□ -0.21
KCNMA1-259ENST00000639406 FAM43AQ8N2R8 423 aa13.76□□□□□ -0.21
KCNMA1-259ENST00000639406 MAP7D2Q96T17 732 aa13.76□□□□□ -0.21
KCNMA1-259ENST00000639406 NOM1Q5C9Z4 860 aaKnown RBP13.76□□□□□ -0.21
KCNMA1-259ENST00000639406 CHIC2Q9UKJ5 165 aa13.76□□□□□ -0.21
KCNMA1-259ENST00000639406 FGD1P98174 961 aa13.76□□□□□ -0.21
KCNMA1-259ENST00000639406 HTATSF1O43719 755 aaKnown RBP13.75□□□□□ -0.21
KCNMA1-259ENST00000639406 CSPP1Q1MSJ5 1256 aa13.75□□□□□ -0.21
KCNMA1-259ENST00000639406 CFAP44Q96MT7 982 aa13.74□□□□□ -0.21
KCNMA1-259ENST00000639406 MYO15BQ96JP2 1530 aa13.74□□□□□ -0.21
KCNMA1-259ENST00000639406 CHGAP10645 457 aaKnown RBP13.74□□□□□ -0.21
KCNMA1-259ENST00000639406 MTERF4Q7Z6M4 381 aaKnown RBP13.74□□□□□ -0.21
KCNMA1-259ENST00000639406 KCNJ4P48050 445 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms