RNA–Protein interactions for RNA: ENST00000639406.1

KCNMA1-259, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 5,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-259ENST00000639406 PELP1Q8IZL8 1130 aaKnown RBP18.04■□□□□ 0.48
KCNMA1-259ENST00000639406 MYT1Q01538 1121 aa17.97■□□□□ 0.47
KCNMA1-259ENST00000639406 DCAF8L2P0C7V8 631 aa17.56■□□□□ 0.4
KCNMA1-259ENST00000639406 ERICH6Q7L0X2 663 aa17.41■□□□□ 0.38
KCNMA1-259ENST00000639406 CENPBP07199 599 aaPredicted RBP17.21■□□□□ 0.35
KCNMA1-259ENST00000639406 CCER1Q8TC90 406 aaPredicted RBP17.16■□□□□ 0.34
KCNMA1-259ENST00000639406 SUPT5HO00267 1087 aaKnown RBP17.02■□□□□ 0.31
KCNMA1-259ENST00000639406 PCGF6Q9BYE7 350 aa16.9■□□□□ 0.3
KCNMA1-259ENST00000639406 TTBK1Q5TCY1 1321 aaPredicted RBP16.81■□□□□ 0.28
KCNMA1-259ENST00000639406 ZEB1P37275 1124 aaPredicted RBP16.8■□□□□ 0.28
KCNMA1-259ENST00000639406 EHMT2Q96KQ7 1210 aa16.71■□□□□ 0.27
KCNMA1-259ENST00000639406 YTHDC1Q96MU7 727 aaKnown RBP16.63■□□□□ 0.25
KCNMA1-259ENST00000639406 NEFLP07196 543 aa16.63■□□□□ 0.25
KCNMA1-259ENST00000639406 FAM9AQ8IZU1 332 aaPredicted RBP16.5■□□□□ 0.23
KCNMA1-259ENST00000639406 NISCHQ9Y2I1 1504 aa16.44■□□□□ 0.22
KCNMA1-259ENST00000639406 APLP2Q06481 763 aa16.43■□□□□ 0.22
KCNMA1-259ENST00000639406 HRCP23327 699 aa16.34■□□□□ 0.21
KCNMA1-259ENST00000639406 SHROOM4Q9ULL8 1493 aa16.31■□□□□ 0.2
KCNMA1-259ENST00000639406 DAXXQ9UER7 740 aaPredicted RBP16.26■□□□□ 0.19
KCNMA1-259ENST00000639406 RTL5Q5HYW3 569 aaPredicted RBP16.22■□□□□ 0.19
KCNMA1-259ENST00000639406 PPARGC1BQ86YN6 1023 aaKnown RBP15.98■□□□□ 0.15
KCNMA1-259ENST00000639406 TRIM26Q12899 539 aaPredicted RBP15.95■□□□□ 0.14
KCNMA1-259ENST00000639406 GTF3C3Q9Y5Q9 886 aa15.94■□□□□ 0.14
KCNMA1-259ENST00000639406 ZNF316A6NFI3 1004 aaPredicted RBP15.9■□□□□ 0.14
KCNMA1-259ENST00000639406 EIF5BO60841 1220 aaKnown RBP15.84■□□□□ 0.13
KCNMA1-259ENST00000639406 GLIPR1L2Q4G1C9 344 aa15.8■□□□□ 0.12
KCNMA1-259ENST00000639406 DIEXFQ68CQ4 756 aaKnown RBP15.78■□□□□ 0.12
KCNMA1-259ENST00000639406 BCANQ96GW7 911 aa15.7■□□□□ 0.1
KCNMA1-259ENST00000639406 RANGAP1P46060 587 aaPredicted RBP15.68■□□□□ 0.1
KCNMA1-259ENST00000639406 TRIM41Q8WV44 630 aa15.66■□□□□ 0.1
KCNMA1-259ENST00000639406 CDK11AQ9UQ88 783 aaPredicted RBP15.65■□□□□ 0.1
KCNMA1-259ENST00000639406 ACIN1Q9UKV3 1341 aaKnown RBP15.63■□□□□ 0.09
KCNMA1-259ENST00000639406 CLSPNQ9HAW4 1339 aa15.57■□□□□ 0.08
KCNMA1-259ENST00000639406 MYT1LQ9UL68 1186 aa15.52■□□□□ 0.07
KCNMA1-259ENST00000639406 UBTFP17480 764 aaKnown RBP15.5■□□□□ 0.07
KCNMA1-259ENST00000639406 ATP1B4Q9UN42 357 aaPredicted RBP15.49■□□□□ 0.07
KCNMA1-259ENST00000639406 POLR3GLQ9BT43 218 aa15.44■□□□□ 0.06
KCNMA1-259ENST00000639406 ANP32AP39687 249 aaKnown RBP15.42■□□□□ 0.06
KCNMA1-259ENST00000639406 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.41■□□□□ 0.06
KCNMA1-259ENST00000639406 CNGB1Q14028 1251 aaPredicted RBP15.37■□□□□ 0.05
KCNMA1-259ENST00000639406 HNRNPUL2Q1KMD3 747 aaKnown RBP15.3■□□□□ 0.04
KCNMA1-259ENST00000639406 SCAF1Q9H7N4 1312 aaKnown RBP15.28■□□□□ 0.04
KCNMA1-259ENST00000639406 LOC105371045A0A1W2PR82 267 aa15.26■□□□□ 0.03
KCNMA1-259ENST00000639406 ABCC9O60706 1549 aa15.26■□□□□ 0.03
KCNMA1-259ENST00000639406 NBR1Q14596 966 aa15.25■□□□□ 0.03
KCNMA1-259ENST00000639406 NPM2Q86SE8 214 aaKnown RBP15.25■□□□□ 0.03
KCNMA1-259ENST00000639406 ITGAEP38570 1179 aa15.24■□□□□ 0.03
KCNMA1-259ENST00000639406 BCL11AQ9H165 835 aa15.24■□□□□ 0.03
KCNMA1-259ENST00000639406 ANP32BQ92688 251 aaKnown RBP15.22■□□□□ 0.03
KCNMA1-259ENST00000639406 ANP32EQ9BTT0 268 aa15.22■□□□□ 0.03
KCNMA1-259ENST00000639406 ANP32CO43423 234 aa15.16■□□□□ 0.02
KCNMA1-259ENST00000639406 FKBP8Q14318 412 aa15.15■□□□□ 0.02
KCNMA1-259ENST00000639406 NEUROD1Q13562 356 aa15.14■□□□□ 0.01
KCNMA1-259ENST00000639406 ZBTB47Q9UFB7 747 aaPredicted RBP15.09■□□□□ 0.01
KCNMA1-259ENST00000639406 CHIC1Q5VXU3 224 aa15.05■□□□□ 0
KCNMA1-259ENST00000639406 TNNT2P45379 298 aaPredicted RBP15.04■□□□□ -0
KCNMA1-259ENST00000639406 ARXQ96QS3 562 aa14.98□□□□□ -0.01
KCNMA1-259ENST00000639406 RTN4Q9NQC3 1192 aaKnown RBP14.96□□□□□ -0.01
KCNMA1-259ENST00000639406 CANXP27824 592 aaKnown RBP14.92□□□□□ -0.02
KCNMA1-259ENST00000639406 SLC4A1APQ9BWU0 796 aaKnown RBP14.92□□□□□ -0.02
KCNMA1-259ENST00000639406 HSP90AA1P07900 732 aaKnown RBP14.88□□□□□ -0.03
KCNMA1-259ENST00000639406 CDK11BP21127 795 aaKnown RBP14.88□□□□□ -0.03
KCNMA1-259ENST00000639406 NAP1L5Q96NT1 182 aaPredicted RBP14.87□□□□□ -0.03
KCNMA1-259ENST00000639406 ERICH6BQ5W0A0 696 aa14.85□□□□□ -0.03
KCNMA1-259ENST00000639406 UPF2Q9HAU5 1272 aaKnown RBP14.84□□□□□ -0.03
KCNMA1-259ENST00000639406 TRIM44Q96DX7 344 aaPredicted RBP14.83□□□□□ -0.04
KCNMA1-259ENST00000639406 NEFMP07197 916 aa14.81□□□□□ -0.04
KCNMA1-259ENST00000639406 CCDC136Q96JN2 1154 aa14.77□□□□□ -0.05
KCNMA1-259ENST00000639406 HNRNPUQ00839 825 aaKnown RBP eCLIP14.73□□□□□ -0.05
KCNMA1-259ENST00000639406 DEKP35659 375 aaKnown RBP14.73□□□□□ -0.05
KCNMA1-259ENST00000639406 AMER1Q5JTC6 1135 aaPredicted RBP14.73□□□□□ -0.05
KCNMA1-259ENST00000639406 DDRGK1Q96HY6 314 aa14.72□□□□□ -0.05
KCNMA1-259ENST00000639406 FAM50AQ14320 339 aaKnown RBP14.71□□□□□ -0.05
KCNMA1-259ENST00000639406 NCLP19338 710 aaKnown RBP14.68□□□□□ -0.06
KCNMA1-259ENST00000639406 TRIM52Q96A61 297 aa14.68□□□□□ -0.06
KCNMA1-259ENST00000639406 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.68□□□□□ -0.06
KCNMA1-259ENST00000639406 PPM1GO15355 546 aaPredicted RBP14.67□□□□□ -0.06
KCNMA1-259ENST00000639406 PABPN1Q86U42 306 aaKnown RBP eCLIP14.65□□□□□ -0.06
KCNMA1-259ENST00000639406 IRX6P78412 446 aaPredicted RBP14.65□□□□□ -0.06
KCNMA1-259ENST00000639406 FBLN2P98095 1184 aa14.63□□□□□ -0.07
KCNMA1-259ENST00000639406 NOP58Q9Y2X3 529 aaKnown RBP14.63□□□□□ -0.07
KCNMA1-259ENST00000639406 ESF1Q9H501 851 aaKnown RBP14.63□□□□□ -0.07
KCNMA1-259ENST00000639406 MIER1Q8N108 512 aa14.62□□□□□ -0.07
KCNMA1-259ENST00000639406 ZNF326Q5BKZ1 582 aaKnown RBP14.61□□□□□ -0.07
KCNMA1-259ENST00000639406 DNTTIP2Q5QJE6 756 aaKnown RBP14.61□□□□□ -0.07
KCNMA1-259ENST00000639406 NPM1P06748 294 aaKnown RBP eCLIP14.61□□□□□ -0.07
KCNMA1-259ENST00000639406 CSRNP3Q8WYN3 585 aa14.6□□□□□ -0.07
KCNMA1-259ENST00000639406 BECN1Q14457 450 aa14.59□□□□□ -0.07
KCNMA1-259ENST00000639406 FAM9BQ8IZU0 186 aa14.59□□□□□ -0.07
KCNMA1-259ENST00000639406 LAS1LQ9Y4W2 734 aaKnown RBP14.58□□□□□ -0.08
KCNMA1-259ENST00000639406 PTMAP06454 111 aaKnown RBP14.56□□□□□ -0.08
KCNMA1-259ENST00000639406 DDX10Q13206 875 aaKnown RBP14.54□□□□□ -0.08
KCNMA1-259ENST00000639406 GOLGA6L22H0YM25 854 aa14.51□□□□□ -0.09
KCNMA1-259ENST00000639406 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.51□□□□□ -0.09
KCNMA1-259ENST00000639406 SUPT16HQ9Y5B9 1047 aaKnown RBP14.49□□□□□ -0.09
KCNMA1-259ENST00000639406 ARID4BQ4LE39 1312 aaPredicted RBP14.49□□□□□ -0.09
KCNMA1-259ENST00000639406 SALL2Q9Y467 1007 aaPredicted RBP14.44□□□□□ -0.1
KCNMA1-259ENST00000639406 L1TD1Q5T7N2 865 aaKnown RBP14.43□□□□□ -0.1
KCNMA1-259ENST00000639406 SLC24A1O60721 1099 aa14.43□□□□□ -0.1
KCNMA1-259ENST00000639406 DCAF1Q9Y4B6 1507 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms