RNA–Protein interactions for RNA: ENST00000638754.1

KCNMA1-244, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 5,069 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-244ENST00000638754 ERCC6Q03468 1493 aa12.11□□□□□ -0.47
KCNMA1-244ENST00000638754 SALL2Q9Y467 1007 aaPredicted RBP12.11□□□□□ -0.47
KCNMA1-244ENST00000638754 EIF4G2P78344 907 aaKnown RBP eCLIP12.08□□□□□ -0.48
KCNMA1-244ENST00000638754 FKBP8Q14318 412 aa12.07□□□□□ -0.48
KCNMA1-244ENST00000638754 MRS2Q9HD23 443 aa12.07□□□□□ -0.48
KCNMA1-244ENST00000638754 RGL3Q3MIN7 710 aa12.06□□□□□ -0.48
KCNMA1-244ENST00000638754 MROH2BQ7Z745 1585 aa12.05□□□□□ -0.48
KCNMA1-244ENST00000638754 CARMIL1Q5VZK9 1371 aa12.05□□□□□ -0.48
KCNMA1-244ENST00000638754 CUX2O14529 1486 aa12.05□□□□□ -0.48
KCNMA1-244ENST00000638754 SOGA1O94964 1423 aa12.04□□□□□ -0.48
KCNMA1-244ENST00000638754 SENP3Q9H4L4 574 aaPredicted RBP12.03□□□□□ -0.48
KCNMA1-244ENST00000638754 WDR43Q15061 677 aaKnown RBP eCLIP12.03□□□□□ -0.48
KCNMA1-244ENST00000638754 MIER1Q8N108 512 aa12.01□□□□□ -0.49
KCNMA1-244ENST00000638754 PPP1R15AO75807 674 aaPredicted RBP12.01□□□□□ -0.49
KCNMA1-244ENST00000638754 CCDC88BA6NC98 1476 aa12□□□□□ -0.49
KCNMA1-244ENST00000638754 ANP32AP39687 249 aaKnown RBP12□□□□□ -0.49
KCNMA1-244ENST00000638754 FHAD1B1AJZ9 1412 aa11.99□□□□□ -0.49
KCNMA1-244ENST00000638754 NPM2Q86SE8 214 aaKnown RBP11.98□□□□□ -0.49
KCNMA1-244ENST00000638754 ARID4BQ4LE39 1312 aaPredicted RBP11.95□□□□□ -0.5
KCNMA1-244ENST00000638754 SMARCA2P51531 1590 aa11.95□□□□□ -0.5
KCNMA1-244ENST00000638754 CCNB3Q8WWL7 1395 aa11.95□□□□□ -0.5
KCNMA1-244ENST00000638754 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.94□□□□□ -0.5
KCNMA1-244ENST00000638754 SIN3AQ96ST3 1273 aa11.94□□□□□ -0.5
KCNMA1-244ENST00000638754 CCDC136Q96JN2 1154 aa11.94□□□□□ -0.5
KCNMA1-244ENST00000638754 EIF4G1Q04637 1599 aaKnown RBP11.93□□□□□ -0.5
KCNMA1-244ENST00000638754 PDS5BQ9NTI5 1447 aa11.93□□□□□ -0.5
KCNMA1-244ENST00000638754 CARD11Q9BXL7 1154 aa11.93□□□□□ -0.5
KCNMA1-244ENST00000638754 ABCC8Q09428 1581 aa11.92□□□□□ -0.5
KCNMA1-244ENST00000638754 SCAF1Q9H7N4 1312 aaKnown RBP11.92□□□□□ -0.5
KCNMA1-244ENST00000638754 TDRD9Q8NDG6 1382 aaKnown RBP11.92□□□□□ -0.5
KCNMA1-244ENST00000638754 CDCA8Q53HL2 280 aa11.9□□□□□ -0.5
KCNMA1-244ENST00000638754 C14orf37Q86TY3 774 aa11.89□□□□□ -0.51
KCNMA1-244ENST00000638754 PLEKHG5O94827 1062 aa11.89□□□□□ -0.51
KCNMA1-244ENST00000638754 UPF2Q9HAU5 1272 aaKnown RBP11.89□□□□□ -0.51
KCNMA1-244ENST00000638754 VPS8Q8N3P4 1428 aa11.88□□□□□ -0.51
KCNMA1-244ENST00000638754 KNSTRNQ9Y448 316 aa11.87□□□□□ -0.51
KCNMA1-244ENST00000638754 HSP90AA1P07900 732 aaKnown RBP11.87□□□□□ -0.51
KCNMA1-244ENST00000638754 IRX6P78412 446 aaPredicted RBP11.87□□□□□ -0.51
KCNMA1-244ENST00000638754 CADPSQ9ULU8 1353 aa11.86□□□□□ -0.51
KCNMA1-244ENST00000638754 KANK4Q5T7N3 995 aaPredicted RBP11.86□□□□□ -0.51
KCNMA1-244ENST00000638754 ZBTB7CA1YPR0 619 aa11.85□□□□□ -0.51
KCNMA1-244ENST00000638754 SENP3-EIF4A1A0A087X0R7 540 aa11.84□□□□□ -0.51
KCNMA1-244ENST00000638754 CFAP53Q96M91 514 aa11.83□□□□□ -0.52
KCNMA1-244ENST00000638754 CARMIL2Q6F5E8 1435 aa11.83□□□□□ -0.52
KCNMA1-244ENST00000638754 WIZO95785 1651 aa11.83□□□□□ -0.52
KCNMA1-244ENST00000638754 TOP2AP11388 1531 aaKnown RBP11.83□□□□□ -0.52
KCNMA1-244ENST00000638754 PPM1GO15355 546 aaPredicted RBP11.82□□□□□ -0.52
KCNMA1-244ENST00000638754 DCAF11Q8TEB1 546 aa11.82□□□□□ -0.52
KCNMA1-244ENST00000638754 POGKQ9P215 609 aa11.82□□□□□ -0.52
KCNMA1-244ENST00000638754 A0A0G2JS52 829 aa11.81□□□□□ -0.52
KCNMA1-244ENST00000638754 ATAD2BQ9ULI0 1458 aa11.81□□□□□ -0.52
KCNMA1-244ENST00000638754 ARHGAP35Q9NRY4 1499 aa11.79□□□□□ -0.52
KCNMA1-244ENST00000638754 FMN1Q68DA7 1419 aa11.79□□□□□ -0.52
KCNMA1-244ENST00000638754 TIMELESSQ9UNS1 1208 aa11.79□□□□□ -0.52
KCNMA1-244ENST00000638754 MLECQ14165 292 aa11.78□□□□□ -0.52
KCNMA1-244ENST00000638754 SETD5Q9C0A6 1442 aa11.78□□□□□ -0.52
KCNMA1-244ENST00000638754 KANK1Q14678 1352 aa11.78□□□□□ -0.52
KCNMA1-244ENST00000638754 MYH16Q9H6N6 1097 aa11.78□□□□□ -0.52
KCNMA1-244ENST00000638754 TRHP20396 242 aaPredicted RBP11.77□□□□□ -0.52
KCNMA1-244ENST00000638754 GGT6Q6P531 493 aa11.77□□□□□ -0.52
KCNMA1-244ENST00000638754 PKD2Q13563 968 aa11.76□□□□□ -0.53
KCNMA1-244ENST00000638754 NEUROD2Q15784 382 aa11.76□□□□□ -0.53
KCNMA1-244ENST00000638754 HAP1P54257 671 aaPredicted RBP11.75□□□□□ -0.53
KCNMA1-244ENST00000638754 EFCAB2Q5VUJ9 269 aa11.75□□□□□ -0.53
KCNMA1-244ENST00000638754 TNNT2P45379 298 aaPredicted RBP11.74□□□□□ -0.53
KCNMA1-244ENST00000638754 TMF1P82094 1093 aa11.74□□□□□ -0.53
KCNMA1-244ENST00000638754 FOXD1Q16676 465 aa11.74□□□□□ -0.53
KCNMA1-244ENST00000638754 NUDCQ9Y266 331 aa11.74□□□□□ -0.53
KCNMA1-244ENST00000638754 LMOD2Q6P5Q4 547 aa11.73□□□□□ -0.53
KCNMA1-244ENST00000638754 RAPGEF2Q9Y4G8 1499 aa11.73□□□□□ -0.53
KCNMA1-244ENST00000638754 CC2D1BQ5T0F9 858 aaKnown RBP11.73□□□□□ -0.53
KCNMA1-244ENST00000638754 MAPK8IP3Q9UPT6 1336 aa11.72□□□□□ -0.53
KCNMA1-244ENST00000638754 JPH4Q96JJ6 628 aa11.72□□□□□ -0.53
KCNMA1-244ENST00000638754 SUPT16HQ9Y5B9 1047 aaKnown RBP11.72□□□□□ -0.53
KCNMA1-244ENST00000638754 FHOD3Q2V2M9 1422 aa11.71□□□□□ -0.53
KCNMA1-244ENST00000638754 SMARCA4P51532 1647 aa11.71□□□□□ -0.54
KCNMA1-244ENST00000638754 RAB3GAP2Q9H2M9 1393 aa11.7□□□□□ -0.54
KCNMA1-244ENST00000638754 NUP155O75694 1391 aa11.7□□□□□ -0.54
KCNMA1-244ENST00000638754 HDGFP51858 240 aaKnown RBP11.69□□□□□ -0.54
KCNMA1-244ENST00000638754 MPHOSPH9Q99550 1183 aa11.69□□□□□ -0.54
KCNMA1-244ENST00000638754 ANP32BQ92688 251 aaKnown RBP11.69□□□□□ -0.54
KCNMA1-244ENST00000638754 SAFB2Q14151 953 aaKnown RBP eCLIP11.68□□□□□ -0.54
KCNMA1-244ENST00000638754 ANKRD30AQ9BXX3 1397 aa11.68□□□□□ -0.54
KCNMA1-244ENST00000638754 U2SURPO15042 1029 aaKnown RBP11.68□□□□□ -0.54
KCNMA1-244ENST00000638754 SRPK2P78362 688 aaKnown RBP11.68□□□□□ -0.54
KCNMA1-244ENST00000638754 LAS1LQ9Y4W2 734 aaKnown RBP11.68□□□□□ -0.54
KCNMA1-244ENST00000638754 HSPA5P11021 654 aaKnown RBP11.67□□□□□ -0.54
KCNMA1-244ENST00000638754 FANCD2Q9BXW9 1451 aa11.67□□□□□ -0.54
KCNMA1-244ENST00000638754 FTSJ3Q8IY81 847 aaKnown RBP11.66□□□□□ -0.54
KCNMA1-244ENST00000638754 HNRNPMP52272 730 aaKnown RBP eCLIP11.66□□□□□ -0.54
KCNMA1-244ENST00000638754 KIF3BO15066 747 aa11.65□□□□□ -0.54
KCNMA1-244ENST00000638754 STK26Q9P289 416 aa11.64□□□□□ -0.55
KCNMA1-244ENST00000638754 RUSC2Q8N2Y8 1516 aa11.64□□□□□ -0.55
KCNMA1-244ENST00000638754 ARXQ96QS3 562 aa11.64□□□□□ -0.55
KCNMA1-244ENST00000638754 NBR1Q14596 966 aa11.63□□□□□ -0.55
KCNMA1-244ENST00000638754 FRAT1Q92837 279 aaPredicted RBP11.63□□□□□ -0.55
KCNMA1-244ENST00000638754 RSPH4AQ5TD94 716 aa11.63□□□□□ -0.55
KCNMA1-244ENST00000638754 SOX12O15370 315 aa11.62□□□□□ -0.55
KCNMA1-244ENST00000638754 MORC1Q86VD1 984 aa11.62□□□□□ -0.55
KCNMA1-244ENST00000638754 SPAG9O60271 1321 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms