RNA–Protein interactions for RNA: ENST00000637881.1

CDKL5-211, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 1,782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-211ENST00000637881 SYNJ1O43426 1573 aa11.38□□□□□ -0.59
CDKL5-211ENST00000637881 DNMBPQ6XZF7 1577 aa11.38□□□□□ -0.59
CDKL5-211ENST00000637881 RAD54L2Q9Y4B4 1467 aa11.37□□□□□ -0.59
CDKL5-211ENST00000637881 WDR62O43379 1518 aa11.37□□□□□ -0.59
CDKL5-211ENST00000637881 SOGA1O94964 1423 aa11.36□□□□□ -0.59
CDKL5-211ENST00000637881 FGD5Q6ZNL6 1462 aa11.36□□□□□ -0.59
CDKL5-211ENST00000637881 FANCIQ9NVI1 1328 aa11.35□□□□□ -0.59
CDKL5-211ENST00000637881 POLA1P09884 1462 aaPredicted RBP11.34□□□□□ -0.59
CDKL5-211ENST00000637881 TOP2BQ02880 1626 aa11.33□□□□□ -0.6
CDKL5-211ENST00000637881 RBM19Q9Y4C8 960 aaKnown RBP11.33□□□□□ -0.6
CDKL5-211ENST00000637881 TDRD9Q8NDG6 1382 aaKnown RBP11.32□□□□□ -0.6
CDKL5-211ENST00000637881 BIVM-ERCC5R4GMW8 1640 aa11.29□□□□□ -0.6
CDKL5-211ENST00000637881 EHMT2Q96KQ7 1210 aa11.28□□□□□ -0.6
CDKL5-211ENST00000637881 AQRO60306 1485 aaKnown RBP eCLIP11.28□□□□□ -0.6
CDKL5-211ENST00000637881 DEKP35659 375 aaKnown RBP11.28□□□□□ -0.6
CDKL5-211ENST00000637881 IFT140Q96RY7 1462 aa11.28□□□□□ -0.6
CDKL5-211ENST00000637881 ZNF608Q9ULD9 1512 aaPredicted RBP11.27□□□□□ -0.6
CDKL5-211ENST00000637881 FBLN2P98095 1184 aa11.24□□□□□ -0.61
CDKL5-211ENST00000637881 RUSC2Q8N2Y8 1516 aa11.23□□□□□ -0.61
CDKL5-211ENST00000637881 SALL2Q9Y467 1007 aaPredicted RBP11.23□□□□□ -0.61
CDKL5-211ENST00000637881 TARBP1Q13395 1621 aaKnown RBP11.23□□□□□ -0.61
CDKL5-211ENST00000637881 ABCA10Q8WWZ4 1543 aa11.21□□□□□ -0.61
CDKL5-211ENST00000637881 KIF27Q86VH2 1401 aa11.2□□□□□ -0.62
CDKL5-211ENST00000637881 GAPVD1Q14C86 1478 aa11.2□□□□□ -0.62
CDKL5-211ENST00000637881 PKNOX2Q96KN3 472 aa11.18□□□□□ -0.62
CDKL5-211ENST00000637881 CHMP7Q8WUX9 453 aaPredicted RBP11.16□□□□□ -0.62
CDKL5-211ENST00000637881 EIF4G3O43432 1585 aaKnown RBP11.16□□□□□ -0.62
CDKL5-211ENST00000637881 IGF1RP08069 1367 aa11.16□□□□□ -0.62
CDKL5-211ENST00000637881 GRIN2BQ13224 1484 aa11.15□□□□□ -0.63
CDKL5-211ENST00000637881 SNAPC4Q5SXM2 1469 aa11.13□□□□□ -0.63
CDKL5-211ENST00000637881 WDR97A6NE52 1622 aa11.13□□□□□ -0.63
CDKL5-211ENST00000637881 CARMIL1Q5VZK9 1371 aa11.11□□□□□ -0.63
CDKL5-211ENST00000637881 ABCA5Q8WWZ7 1642 aa11.1□□□□□ -0.63
CDKL5-211ENST00000637881 NEFLP07196 543 aa11.1□□□□□ -0.63
CDKL5-211ENST00000637881 RANGAP1P46060 587 aaPredicted RBP11.09□□□□□ -0.63
CDKL5-211ENST00000637881 UBTFP17480 764 aaKnown RBP11.08□□□□□ -0.64
CDKL5-211ENST00000637881 POTEDQ86YR6 584 aa11.08□□□□□ -0.64
CDKL5-211ENST00000637881 PBRM1Q86U86 1689 aa11.07□□□□□ -0.64
CDKL5-211ENST00000637881 EEA1Q15075 1411 aa11.07□□□□□ -0.64
CDKL5-211ENST00000637881 ERICH3Q5RHP9 1530 aa11.06□□□□□ -0.64
CDKL5-211ENST00000637881 FKBP8Q14318 412 aa11.06□□□□□ -0.64
CDKL5-211ENST00000637881 OSCARQ8IYS5 282 aa11.06□□□□□ -0.64
CDKL5-211ENST00000637881 FHAD1B1AJZ9 1412 aa11.05□□□□□ -0.64
CDKL5-211ENST00000637881 CCDC136Q96JN2 1154 aa11.05□□□□□ -0.64
CDKL5-211ENST00000637881 MAGI1Q96QZ7 1491 aaPredicted RBP11.05□□□□□ -0.64
CDKL5-211ENST00000637881 SYNJ2O15056 1496 aa11.03□□□□□ -0.64
CDKL5-211ENST00000637881 RAPGEF2Q9Y4G8 1499 aa11.02□□□□□ -0.65
CDKL5-211ENST00000637881 PODXL2Q9NZ53 605 aa11.01□□□□□ -0.65
CDKL5-211ENST00000637881 ADAMTS12P58397 1594 aa11.01□□□□□ -0.65
CDKL5-211ENST00000637881 CDK11AQ9UQ88 783 aaPredicted RBP11□□□□□ -0.65
CDKL5-211ENST00000637881 GLIPR1L2Q4G1C9 344 aa11□□□□□ -0.65
CDKL5-211ENST00000637881 GRIN2AQ12879 1464 aa11□□□□□ -0.65
CDKL5-211ENST00000637881 PRXQ9BXM0 1461 aa11□□□□□ -0.65
CDKL5-211ENST00000637881 C11orf95C9JLR9 678 aaPredicted RBP10.99□□□□□ -0.65
CDKL5-211ENST00000637881 BCANQ96GW7 911 aa10.99□□□□□ -0.65
CDKL5-211ENST00000637881 CUL7Q14999 1698 aa10.98□□□□□ -0.65
CDKL5-211ENST00000637881 CHD1O14646 1710 aa10.97□□□□□ -0.65
CDKL5-211ENST00000637881 P3H3Q8IVL6 736 aa10.95□□□□□ -0.66
CDKL5-211ENST00000637881 NOP58Q9Y2X3 529 aaKnown RBP10.95□□□□□ -0.66
CDKL5-211ENST00000637881 RTL5Q5HYW3 569 aaPredicted RBP10.95□□□□□ -0.66
CDKL5-211ENST00000637881 GOLGA3Q08378 1498 aa10.95□□□□□ -0.66
CDKL5-211ENST00000637881 JPH4Q96JJ6 628 aa10.94□□□□□ -0.66
CDKL5-211ENST00000637881 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.93□□□□□ -0.66
CDKL5-211ENST00000637881 IL27Q8NEV9 243 aa10.93□□□□□ -0.66
CDKL5-211ENST00000637881 CEP170Q5SW79 1584 aa10.92□□□□□ -0.66
CDKL5-211ENST00000637881 RSPH6AQ9H0K4 717 aa10.92□□□□□ -0.66
CDKL5-211ENST00000637881 RIMBP3CA6NJZ7 1639 aa10.91□□□□□ -0.66
CDKL5-211ENST00000637881 RIMBP3BA6NNM3 1639 aa10.91□□□□□ -0.66
CDKL5-211ENST00000637881 KIF21BO75037 1637 aa10.91□□□□□ -0.66
CDKL5-211ENST00000637881 RIMBP3Q9UFD9 1639 aa10.91□□□□□ -0.66
CDKL5-211ENST00000637881 NUP160Q12769 1436 aa10.9□□□□□ -0.66
CDKL5-211ENST00000637881 PLEKHG5O94827 1062 aa10.9□□□□□ -0.67
CDKL5-211ENST00000637881 WASHC2AQ641Q2 1341 aa10.89□□□□□ -0.67
CDKL5-211ENST00000637881 KIAA0586Q9BVV6 1533 aa10.88□□□□□ -0.67
CDKL5-211ENST00000637881 WASHC2CQ9Y4E1 1318 aa10.88□□□□□ -0.67
CDKL5-211ENST00000637881 USP35Q9P2H5 1018 aa10.87□□□□□ -0.67
CDKL5-211ENST00000637881 TNIKQ9UKE5 1360 aa10.86□□□□□ -0.67
CDKL5-211ENST00000637881 PRG4Q92954 1404 aaPredicted RBP10.86□□□□□ -0.67
CDKL5-211ENST00000637881 SOCS7O14512 581 aa10.85□□□□□ -0.67
CDKL5-211ENST00000637881 ATP1B4Q9UN42 357 aaPredicted RBP10.85□□□□□ -0.67
CDKL5-211ENST00000637881 IQGAP2Q13576 1575 aa10.84□□□□□ -0.67
CDKL5-211ENST00000637881 ARHGEF11O15085 1522 aa10.84□□□□□ -0.67
CDKL5-211ENST00000637881 CEP162Q5TB80 1403 aa10.84□□□□□ -0.67
CDKL5-211ENST00000637881 ITGAEP38570 1179 aa10.83□□□□□ -0.68
CDKL5-211ENST00000637881 CYB5RLQ6IPT4 315 aa10.83□□□□□ -0.68
CDKL5-211ENST00000637881 CLASP1Q7Z460 1538 aa10.83□□□□□ -0.68
CDKL5-211ENST00000637881 CCER2I3L3R5 266 aa10.82□□□□□ -0.68
CDKL5-211ENST00000637881 NBR1Q14596 966 aa10.82□□□□□ -0.68
CDKL5-211ENST00000637881 CTTNBP2Q8WZ74 1663 aa10.81□□□□□ -0.68
CDKL5-211ENST00000637881 CLIP1P30622 1438 aa10.8□□□□□ -0.68
CDKL5-211ENST00000637881 CARMIL2Q6F5E8 1435 aa10.8□□□□□ -0.68
CDKL5-211ENST00000637881 ARID3CA6NKF2 412 aa10.8□□□□□ -0.68
CDKL5-211ENST00000637881 ERCC6L2Q5T890 1561 aa10.8□□□□□ -0.68
CDKL5-211ENST00000637881 RTN4Q9NQC3 1192 aaKnown RBP10.8□□□□□ -0.68
CDKL5-211ENST00000637881 FHOD3Q2V2M9 1422 aa10.78□□□□□ -0.68
CDKL5-211ENST00000637881 PPP4R3CPQ6ZMV5 832 aa10.78□□□□□ -0.68
CDKL5-211ENST00000637881 PPP4R2Q9NY27 417 aa10.77□□□□□ -0.68
CDKL5-211ENST00000637881 IPO9Q96P70 1041 aaKnown RBP10.77□□□□□ -0.69
CDKL5-211ENST00000637881 ZMYND15Q9H091 742 aa10.77□□□□□ -0.69
CDKL5-211ENST00000637881 PTPRGP23470 1445 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms