RNA–Protein interactions for RNA: ENST00000637881.1

CDKL5-211, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 1,782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-211ENST00000637881 NISCHQ9Y2I1 1504 aa15.77■□□□□ 0.12
CDKL5-211ENST00000637881 AEBP2Q6ZN18 517 aaPredicted RBP15.57■□□□□ 0.08
CDKL5-211ENST00000637881 CHIC1Q5VXU3 224 aa15.1■□□□□ 0.01
CDKL5-211ENST00000637881 PELP1Q8IZL8 1130 aaKnown RBP14.01□□□□□ -0.17
CDKL5-211ENST00000637881 CCDC180Q9P1Z9 1646 aa13.79□□□□□ -0.2
CDKL5-211ENST00000637881 MYT1Q01538 1121 aa13.78□□□□□ -0.2
CDKL5-211ENST00000637881 ABCC9O60706 1549 aa13.54□□□□□ -0.24
CDKL5-211ENST00000637881 DCAF8L2P0C7V8 631 aa13.43□□□□□ -0.26
CDKL5-211ENST00000637881 HRCP23327 699 aa13.33□□□□□ -0.28
CDKL5-211ENST00000637881 SENP3Q9H4L4 574 aaPredicted RBP13.33□□□□□ -0.28
CDKL5-211ENST00000637881 PHF23Q9BUL5 403 aaPredicted RBP13.27□□□□□ -0.29
CDKL5-211ENST00000637881 TTBK1Q5TCY1 1321 aaPredicted RBP13.2□□□□□ -0.3
CDKL5-211ENST00000637881 ZCCHC6Q5VYS8 1495 aaKnown RBP13.14□□□□□ -0.31
CDKL5-211ENST00000637881 DNAJC5Q9H3Z4 198 aa13.11□□□□□ -0.31
CDKL5-211ENST00000637881 NACADO15069 1562 aa12.98□□□□□ -0.33
CDKL5-211ENST00000637881 RB1CC1Q8TDY2 1594 aa12.98□□□□□ -0.33
CDKL5-211ENST00000637881 DCAF1Q9Y4B6 1507 aa12.94□□□□□ -0.34
CDKL5-211ENST00000637881 MYO15BQ96JP2 1530 aa12.89□□□□□ -0.35
CDKL5-211ENST00000637881 DNAJC5BQ9UF47 199 aa12.86□□□□□ -0.35
CDKL5-211ENST00000637881 SHROOM4Q9ULL8 1493 aa12.85□□□□□ -0.35
CDKL5-211ENST00000637881 PABPN1Q86U42 306 aaKnown RBP eCLIP12.79□□□□□ -0.36
CDKL5-211ENST00000637881 SCRIBQ14160 1630 aa12.79□□□□□ -0.36
CDKL5-211ENST00000637881 SCAF1Q9H7N4 1312 aaKnown RBP12.79□□□□□ -0.36
CDKL5-211ENST00000637881 PPARGC1BQ86YN6 1023 aaKnown RBP12.66□□□□□ -0.38
CDKL5-211ENST00000637881 UNC13AQ9UPW8 1703 aa12.64□□□□□ -0.39
CDKL5-211ENST00000637881 BICRAQ9NZM4 1560 aa12.57□□□□□ -0.4
CDKL5-211ENST00000637881 ZEB1P37275 1124 aaPredicted RBP12.51□□□□□ -0.41
CDKL5-211ENST00000637881 PCGF6Q9BYE7 350 aa12.51□□□□□ -0.41
CDKL5-211ENST00000637881 ACIN1Q9UKV3 1341 aaKnown RBP12.42□□□□□ -0.42
CDKL5-211ENST00000637881 CENPBP07199 599 aaPredicted RBP12.37□□□□□ -0.43
CDKL5-211ENST00000637881 FOXD1Q16676 465 aa12.37□□□□□ -0.43
CDKL5-211ENST00000637881 BCL11AQ9H165 835 aa12.35□□□□□ -0.43
CDKL5-211ENST00000637881 ERICH6Q7L0X2 663 aa12.35□□□□□ -0.43
CDKL5-211ENST00000637881 CECR2Q9BXF3 1484 aa12.34□□□□□ -0.43
CDKL5-211ENST00000637881 PRKCSHP14314 528 aaPredicted RBP12.33□□□□□ -0.44
CDKL5-211ENST00000637881 PLPPR3Q6T4P5 718 aa12.26□□□□□ -0.45
CDKL5-211ENST00000637881 EIF4G1Q04637 1599 aaKnown RBP12.25□□□□□ -0.45
CDKL5-211ENST00000637881 SUPT5HO00267 1087 aaKnown RBP12.24□□□□□ -0.45
CDKL5-211ENST00000637881 TRIM26Q12899 539 aaPredicted RBP12.24□□□□□ -0.45
CDKL5-211ENST00000637881 GTF3C3Q9Y5Q9 886 aa12.21□□□□□ -0.45
CDKL5-211ENST00000637881 MROH2BQ7Z745 1585 aa12.21□□□□□ -0.46
CDKL5-211ENST00000637881 NEUROD1Q13562 356 aa12.2□□□□□ -0.46
CDKL5-211ENST00000637881 APLP2Q06481 763 aa12.2□□□□□ -0.46
CDKL5-211ENST00000637881 BAZ1AQ9NRL2 1556 aaPredicted RBP12.19□□□□□ -0.46
CDKL5-211ENST00000637881 FAM9AQ8IZU1 332 aaPredicted RBP12.17□□□□□ -0.46
CDKL5-211ENST00000637881 SMARCA4P51532 1647 aa12.17□□□□□ -0.46
CDKL5-211ENST00000637881 CC2D2AQ9P2K1 1620 aa12.16□□□□□ -0.46
CDKL5-211ENST00000637881 RSF1Q96T23 1441 aaPredicted RBP12.15□□□□□ -0.46
CDKL5-211ENST00000637881 ATAD2BQ9ULI0 1458 aa12.09□□□□□ -0.47
CDKL5-211ENST00000637881 WIZO95785 1651 aa12.08□□□□□ -0.48
CDKL5-211ENST00000637881 ANP32EQ9BTT0 268 aa12.07□□□□□ -0.48
CDKL5-211ENST00000637881 SMARCA2P51531 1590 aa12.04□□□□□ -0.48
CDKL5-211ENST00000637881 BAZ1BQ9UIG0 1483 aaKnown RBP12.02□□□□□ -0.49
CDKL5-211ENST00000637881 NCAPD3P42695 1498 aa12.01□□□□□ -0.49
CDKL5-211ENST00000637881 CLSPNQ9HAW4 1339 aa11.96□□□□□ -0.49
CDKL5-211ENST00000637881 PEG3Q9GZU2 1588 aa11.96□□□□□ -0.49
CDKL5-211ENST00000637881 HMGXB3Q12766 1538 aa11.92□□□□□ -0.5
CDKL5-211ENST00000637881 TOP2AP11388 1531 aaKnown RBP11.9□□□□□ -0.5
CDKL5-211ENST00000637881 CCDC88BA6NC98 1476 aa11.85□□□□□ -0.51
CDKL5-211ENST00000637881 DIEXFQ68CQ4 756 aaKnown RBP11.83□□□□□ -0.52
CDKL5-211ENST00000637881 CSRNP3Q8WYN3 585 aa11.79□□□□□ -0.52
CDKL5-211ENST00000637881 NESP48681 1621 aa11.77□□□□□ -0.53
CDKL5-211ENST00000637881 TRIM41Q8WV44 630 aa11.74□□□□□ -0.53
CDKL5-211ENST00000637881 CADPSQ9ULU8 1353 aa11.74□□□□□ -0.53
CDKL5-211ENST00000637881 PPP6R1Q9UPN7 881 aa11.72□□□□□ -0.53
CDKL5-211ENST00000637881 ADRA2BP18089 450 aa11.69□□□□□ -0.54
CDKL5-211ENST00000637881 TSHZ2Q9NRE2 1034 aa11.67□□□□□ -0.54
CDKL5-211ENST00000637881 CUX2O14529 1486 aa11.67□□□□□ -0.54
CDKL5-211ENST00000637881 CFTRP13569 1480 aa11.67□□□□□ -0.54
CDKL5-211ENST00000637881 MYT1LQ9UL68 1186 aa11.67□□□□□ -0.54
CDKL5-211ENST00000637881 ERCC6Q03468 1493 aa11.65□□□□□ -0.54
CDKL5-211ENST00000637881 LAMC3Q9Y6N6 1575 aa11.64□□□□□ -0.55
CDKL5-211ENST00000637881 PDS5BQ9NTI5 1447 aa11.63□□□□□ -0.55
CDKL5-211ENST00000637881 PIAS4Q8N2W9 510 aaPredicted RBP11.62□□□□□ -0.55
CDKL5-211ENST00000637881 FANCD2Q9BXW9 1451 aa11.6□□□□□ -0.55
CDKL5-211ENST00000637881 LOC105371045A0A1W2PR82 267 aa11.6□□□□□ -0.55
CDKL5-211ENST00000637881 SLC24A1O60721 1099 aa11.59□□□□□ -0.55
CDKL5-211ENST00000637881 MSH5O43196 834 aa11.59□□□□□ -0.55
CDKL5-211ENST00000637881 SUPT16HQ9Y5B9 1047 aaKnown RBP11.57□□□□□ -0.56
CDKL5-211ENST00000637881 CEP164Q9UPV0 1460 aa11.56□□□□□ -0.56
CDKL5-211ENST00000637881 ZNF316A6NFI3 1004 aaPredicted RBP11.54□□□□□ -0.56
CDKL5-211ENST00000637881 KIF21AQ7Z4S6 1674 aa11.54□□□□□ -0.56
CDKL5-211ENST00000637881 ERICH6BQ5W0A0 696 aa11.54□□□□□ -0.56
CDKL5-211ENST00000637881 UBE2Q2Q8WVN8 375 aa11.54□□□□□ -0.56
CDKL5-211ENST00000637881 ABCC8Q09428 1581 aa11.51□□□□□ -0.57
CDKL5-211ENST00000637881 CCER1Q8TC90 406 aaPredicted RBP11.5□□□□□ -0.57
CDKL5-211ENST00000637881 MRC2Q9UBG0 1479 aa11.47□□□□□ -0.57
CDKL5-211ENST00000637881 PRDM2Q13029 1718 aa11.47□□□□□ -0.57
CDKL5-211ENST00000637881 ILDR1Q86SU0 546 aaPredicted RBP11.46□□□□□ -0.57
CDKL5-211ENST00000637881 WRNQ14191 1432 aaPredicted RBP eCLIP11.46□□□□□ -0.57
CDKL5-211ENST00000637881 URB2Q14146 1524 aaKnown RBP11.46□□□□□ -0.58
CDKL5-211ENST00000637881 YTHDC1Q96MU7 727 aaKnown RBP11.46□□□□□ -0.58
CDKL5-211ENST00000637881 DAXXQ9UER7 740 aaPredicted RBP11.43□□□□□ -0.58
CDKL5-211ENST00000637881 CUX1P39880 1505 aa11.42□□□□□ -0.58
CDKL5-211ENST00000637881 TOPBP1Q92547 1522 aa11.42□□□□□ -0.58
CDKL5-211ENST00000637881 THOC2Q8NI27 1593 aaKnown RBP11.4□□□□□ -0.58
CDKL5-211ENST00000637881 MIER1Q8N108 512 aa11.39□□□□□ -0.59
CDKL5-211ENST00000637881 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.39□□□□□ -0.59
CDKL5-211ENST00000637881 EIF5BO60841 1220 aaKnown RBP11.39□□□□□ -0.59
CDKL5-211ENST00000637881 ANO8Q9HCE9 1232 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms