RNA–Protein interactions for RNA: ENST00000628709.2

TRDN-206, Transcript of triadin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRDN, Length 1,661 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRDN-206ENST00000628709 SSUH2Q9Y2M2 353 aa10.12□□□□□ -0.79
TRDN-206ENST00000628709 PAK3O75914 559 aaPredicted RBP10.11□□□□□ -0.79
TRDN-206ENST00000628709 ZNF692Q9BU19 519 aaPredicted RBP10.09□□□□□ -0.79
TRDN-206ENST00000628709 PHF12Q96QT6 1004 aa10.07□□□□□ -0.8
TRDN-206ENST00000628709 FBLN2P98095 1184 aa10.04□□□□□ -0.8
TRDN-206ENST00000628709 SLAIN1Q8ND83 568 aa10.01□□□□□ -0.81
TRDN-206ENST00000628709 POTEFA5A3E0 1075 aa9.96□□□□□ -0.82
TRDN-206ENST00000628709 RNF166Q96A37 237 aaPredicted RBP9.96□□□□□ -0.82
TRDN-206ENST00000628709 KRTAP3-3Q9BYR6 98 aa9.95□□□□□ -0.82
TRDN-206ENST00000628709 KRTAP3-2Q9BYR7 98 aa9.95□□□□□ -0.82
TRDN-206ENST00000628709 SNPHO15079 494 aa9.93□□□□□ -0.82
TRDN-206ENST00000628709 MARVELD3Q96A59 401 aa9.92□□□□□ -0.82
TRDN-206ENST00000628709 ATN1P54259 1190 aaPredicted RBP9.9□□□□□ -0.82
TRDN-206ENST00000628709 MS4A3Q96HJ5 214 aa9.9□□□□□ -0.83
TRDN-206ENST00000628709 SEC24BO95487 1268 aa9.85□□□□□ -0.83
TRDN-206ENST00000628709 PABPN1Q86U42 306 aaKnown RBP eCLIP9.84□□□□□ -0.83
TRDN-206ENST00000628709 EMP3P54852 163 aa9.8□□□□□ -0.84
TRDN-206ENST00000628709 HS3ST6Q96QI5 342 aa9.75□□□□□ -0.85
TRDN-206ENST00000628709 MKRN4PQ13434 485 aaPredicted RBP9.73□□□□□ -0.85
TRDN-206ENST00000628709 MYT1LQ9UL68 1186 aa9.71□□□□□ -0.85
TRDN-206ENST00000628709 COLQQ9Y215 455 aaPredicted RBP9.71□□□□□ -0.85
TRDN-206ENST00000628709 FAM205CA6NFA0 338 aa9.66□□□□□ -0.86
TRDN-206ENST00000628709 CSRNP3Q8WYN3 585 aa9.66□□□□□ -0.86
TRDN-206ENST00000628709 CREBZFQ9NS37 354 aa9.65□□□□□ -0.86
TRDN-206ENST00000628709 POTEB3A0JP26 581 aa9.64□□□□□ -0.87
TRDN-206ENST00000628709 POTEBQ6S5H4 581 aa9.64□□□□□ -0.87
TRDN-206ENST00000628709 BMP2KQ9NSY1 1161 aaPredicted RBP9.63□□□□□ -0.87
TRDN-206ENST00000628709 EHMT2Q96KQ7 1210 aa9.61□□□□□ -0.87
TRDN-206ENST00000628709 NPM1P06748 294 aaKnown RBP eCLIP9.6□□□□□ -0.87
TRDN-206ENST00000628709 IER5LQ5T953 404 aa9.59□□□□□ -0.87
TRDN-206ENST00000628709 TIE1P35590 1138 aa9.56□□□□□ -0.88
TRDN-206ENST00000628709 PLA2G2EQ9NZK7 142 aa9.55□□□□□ -0.88
TRDN-206ENST00000628709 PTGER2P43116 358 aa9.52□□□□□ -0.89
TRDN-206ENST00000628709 IRX2Q9BZI1 471 aaPredicted RBP9.48□□□□□ -0.89
TRDN-206ENST00000628709 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.45□□□□□ -0.9
TRDN-206ENST00000628709 PLCG2P16885 1265 aa9.39□□□□□ -0.91
TRDN-206ENST00000628709 TTLL13PA6NNM8 815 aa9.38□□□□□ -0.91
TRDN-206ENST00000628709 TRPC6Q9Y210 931 aa9.36□□□□□ -0.91
TRDN-206ENST00000628709 STAG3Q9UJ98 1225 aa9.35□□□□□ -0.91
TRDN-206ENST00000628709 RGS20O76081 388 aa9.34□□□□□ -0.91
TRDN-206ENST00000628709 KIF12Q96FN5 646 aa9.34□□□□□ -0.91
TRDN-206ENST00000628709 TRIM35Q9UPQ4 493 aa9.33□□□□□ -0.92
TRDN-206ENST00000628709 SPDYE4A6NLX3 237 aa9.29□□□□□ -0.92
TRDN-206ENST00000628709 LOC100996750A0A140TA64 210 aa9.29□□□□□ -0.92
TRDN-206ENST00000628709 KRTAP4-6Q9BYQ5 205 aa9.29□□□□□ -0.92
TRDN-206ENST00000628709 CCDC61Q9Y6R9 512 aa9.24□□□□□ -0.93
TRDN-206ENST00000628709 ERBB3P21860 1342 aa9.23□□□□□ -0.93
TRDN-206ENST00000628709 TSPYL2Q9H2G4 693 aaPredicted RBP9.21□□□□□ -0.93
TRDN-206ENST00000628709 HCSTQ9UBK5 93 aa9.2□□□□□ -0.94
TRDN-206ENST00000628709 MNX1P50219 401 aaPredicted RBP9.19□□□□□ -0.94
TRDN-206ENST00000628709 MAP3K13O43283 966 aa9.15□□□□□ -0.94
TRDN-206ENST00000628709 IRX5P78411 483 aaPredicted RBP9.14□□□□□ -0.95
TRDN-206ENST00000628709 Q6ZNB5 142 aa9.13□□□□□ -0.95
TRDN-206ENST00000628709 OCEL1Q9H607 264 aa9.11□□□□□ -0.95
TRDN-206ENST00000628709 PROM2Q8N271 834 aa9.1□□□□□ -0.95
TRDN-206ENST00000628709 C3orf67Q6ZVT6 689 aa9.1□□□□□ -0.95
TRDN-206ENST00000628709 HOXB1P14653 301 aaPredicted RBP9.09□□□□□ -0.95
TRDN-206ENST00000628709 ZNF687Q8N1G0 1237 aa9.06□□□□□ -0.96
TRDN-206ENST00000628709 VARS2Q5ST30 1063 aaKnown RBP9.04□□□□□ -0.96
TRDN-206ENST00000628709 ANKRD13DQ6ZTN6 518 aa9.02□□□□□ -0.97
TRDN-206ENST00000628709 ZNF710Q8N1W2 664 aa9□□□□□ -0.97
TRDN-206ENST00000628709 SGIP1Q9BQI5 828 aa8.99□□□□□ -0.97
TRDN-206ENST00000628709 TMEM106CQ9BVX2 250 aa8.94□□□□□ -0.98
TRDN-206ENST00000628709 PLEKHG5O94827 1062 aa8.93□□□□□ -0.98
TRDN-206ENST00000628709 L3MBTL3Q96JM7 780 aaPredicted RBP8.92□□□□□ -0.98
TRDN-206ENST00000628709 HOXB3P14651 431 aaPredicted RBP8.89□□□□□ -0.99
TRDN-206ENST00000628709 DOK7Q18PE1 504 aa8.88□□□□□ -0.99
TRDN-206ENST00000628709 PCDHB13Q9Y5F0 798 aa8.86□□□□□ -0.99
TRDN-206ENST00000628709 MIER1Q8N108 512 aa8.85□□□□□ -0.99
TRDN-206ENST00000628709 IFFO2Q5TF58 517 aa8.84□□□□□ -0.99
TRDN-206ENST00000628709 RIMBP2O15034 1052 aa8.82□□□□□ -1
TRDN-206ENST00000628709 LSM11P83369 360 aaKnown RBP eCLIP8.82□□□□□ -1
TRDN-206ENST00000628709 TRAF7Q6Q0C0 670 aa8.81□□□□□ -1
TRDN-206ENST00000628709 ZBTB47Q9UFB7 747 aaPredicted RBP8.81□□□□□ -1
TRDN-206ENST00000628709 FKBP8Q14318 412 aa8.8□□□□□ -1
TRDN-206ENST00000628709 LAPTM4AQ15012 233 aa8.8□□□□□ -1
TRDN-206ENST00000628709 PLCD3Q8N3E9 789 aa8.79□□□□□ -1
TRDN-206ENST00000628709 A0A0G2JS52 829 aa8.77□□□□□ -1.01
TRDN-206ENST00000628709 RASEFQ8IZ41 740 aa8.75□□□□□ -1.01
TRDN-206ENST00000628709 ZNF775Q96BV0 537 aaPredicted RBP8.75□□□□□ -1.01
TRDN-206ENST00000628709 ZNF787Q6DD87 383 aa8.72□□□□□ -1.01
TRDN-206ENST00000628709 FBXO3Q9UK99 471 aa8.72□□□□□ -1.01
TRDN-206ENST00000628709 NUBP1P53384 320 aa8.69□□□□□ -1.02
TRDN-206ENST00000628709 IFNL1Q8IU54 200 aa8.69□□□□□ -1.02
TRDN-206ENST00000628709 ZSWIM6Q9HCJ5 1215 aa8.68□□□□□ -1.02
TRDN-206ENST00000628709 PDCD7Q8N8D1 485 aaKnown RBP8.66□□□□□ -1.02
TRDN-206ENST00000628709 FAM212AQ96EL1 285 aa8.66□□□□□ -1.02
TRDN-206ENST00000628709 LCE2BO14633 110 aa8.65□□□□□ -1.02
TRDN-206ENST00000628709 PBX2P40425 430 aa8.6□□□□□ -1.03
TRDN-206ENST00000628709 STK17AQ9UEE5 414 aa8.57□□□□□ -1.04
TRDN-206ENST00000628709 SUZ12Q15022 739 aaKnown RBP8.56□□□□□ -1.04
TRDN-206ENST00000628709 DCAF8Q5TAQ9 597 aa8.55□□□□□ -1.04
TRDN-206ENST00000628709 VASPP50552 380 aaPredicted RBP8.53□□□□□ -1.04
TRDN-206ENST00000628709 G3V3G9 751 aa8.53□□□□□ -1.04
TRDN-206ENST00000628709 GSE1Q14687 1217 aa8.51□□□□□ -1.05
TRDN-206ENST00000628709 KLHL34Q8N239 644 aa8.5□□□□□ -1.05
TRDN-206ENST00000628709 GFRA3O60609 400 aa8.49□□□□□ -1.05
TRDN-206ENST00000628709 PYGBP11216 843 aa8.48□□□□□ -1.05
TRDN-206ENST00000628709 GPR153Q6NV75 609 aa8.48□□□□□ -1.05
TRDN-206ENST00000628709 ZNF316A6NFI3 1004 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms