RNA–Protein interactions for RNA: ENST00000628709.2

TRDN-206, Transcript of triadin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRDN, Length 1,661 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRDN-206ENST00000628709 AEBP2Q6ZN18 517 aaPredicted RBP21.57■■□□□ 1.04
TRDN-206ENST00000628709 CHIC1Q5VXU3 224 aa20.39■□□□□ 0.86
TRDN-206ENST00000628709 POTEDQ86YR6 584 aa20.04■□□□□ 0.8
TRDN-206ENST00000628709 SENP3Q9H4L4 574 aaPredicted RBP18.93■□□□□ 0.62
TRDN-206ENST00000628709 PHF23Q9BUL5 403 aaPredicted RBP18.32■□□□□ 0.52
TRDN-206ENST00000628709 FOXD1Q16676 465 aa17.72■□□□□ 0.43
TRDN-206ENST00000628709 MSH5O43196 834 aa17.48■□□□□ 0.39
TRDN-206ENST00000628709 PIAS4Q8N2W9 510 aaPredicted RBP16.18■□□□□ 0.18
TRDN-206ENST00000628709 CACNB1Q02641 598 aaPredicted RBP16.08■□□□□ 0.17
TRDN-206ENST00000628709 POTEHQ6S545 545 aa15.38■□□□□ 0.05
TRDN-206ENST00000628709 PPP6R1Q9UPN7 881 aa15.05■□□□□ -0
TRDN-206ENST00000628709 ADRA2BP18089 450 aa14.95□□□□□ -0.02
TRDN-206ENST00000628709 DMRT2Q9Y5R5 561 aa14.67□□□□□ -0.06
TRDN-206ENST00000628709 RNF39Q9H2S5 420 aa14.62□□□□□ -0.07
TRDN-206ENST00000628709 C1QBPQ07021 282 aaKnown RBP14.41□□□□□ -0.1
TRDN-206ENST00000628709 PLPPR3Q6T4P5 718 aa14.3□□□□□ -0.12
TRDN-206ENST00000628709 MAPK8IP2Q13387 824 aaPredicted RBP14.25□□□□□ -0.13
TRDN-206ENST00000628709 DCAF8L1A6NGE4 600 aa14.18□□□□□ -0.14
TRDN-206ENST00000628709 SCAF1Q9H7N4 1312 aaKnown RBP13.96□□□□□ -0.17
TRDN-206ENST00000628709 SP7Q8TDD2 431 aaPredicted RBP13.57□□□□□ -0.24
TRDN-206ENST00000628709 PLSCR2Q9NRY7 297 aa13.49□□□□□ -0.25
TRDN-206ENST00000628709 DNAJC5BQ9UF47 199 aa13.43□□□□□ -0.26
TRDN-206ENST00000628709 HOXD11P31277 338 aaPredicted RBP13.4□□□□□ -0.26
TRDN-206ENST00000628709 DSG3P32926 999 aa13.06□□□□□ -0.32
TRDN-206ENST00000628709 CHRDL2Q6WN34 429 aa13.02□□□□□ -0.33
TRDN-206ENST00000628709 RNF216Q9NWF9 866 aaPredicted RBP12.84□□□□□ -0.35
TRDN-206ENST00000628709 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.83□□□□□ -0.36
TRDN-206ENST00000628709 CAPN15O75808 1086 aa12.77□□□□□ -0.37
TRDN-206ENST00000628709 LHX8Q68G74 356 aa12.71□□□□□ -0.37
TRDN-206ENST00000628709 RBM42Q9BTD8 480 aaKnown RBP12.7□□□□□ -0.38
TRDN-206ENST00000628709 HAX1O00165 279 aa12.61□□□□□ -0.39
TRDN-206ENST00000628709 SPINK5Q9NQ38 1064 aaPredicted RBP12.57□□□□□ -0.4
TRDN-206ENST00000628709 CNKSR2Q8WXI2 1034 aa12.5□□□□□ -0.41
TRDN-206ENST00000628709 PIP4P2Q8N4L2 257 aa12.27□□□□□ -0.45
TRDN-206ENST00000628709 PPP4R3CPQ6ZMV5 832 aa12.24□□□□□ -0.45
TRDN-206ENST00000628709 U3KPZ7 1027 aaPredicted RBP12.23□□□□□ -0.45
TRDN-206ENST00000628709 ABCB7O75027 752 aa12.22□□□□□ -0.45
TRDN-206ENST00000628709 PCDH10Q9P2E7 1040 aa12.13□□□□□ -0.47
TRDN-206ENST00000628709 EVX2Q03828 476 aa12.13□□□□□ -0.47
TRDN-206ENST00000628709 TRHP20396 242 aaPredicted RBP12.09□□□□□ -0.47
TRDN-206ENST00000628709 ZNF219Q9P2Y4 722 aaPredicted RBP12.09□□□□□ -0.47
TRDN-206ENST00000628709 POTEMA6NI47 508 aa12.05□□□□□ -0.48
TRDN-206ENST00000628709 APLP2Q06481 763 aa12.01□□□□□ -0.49
TRDN-206ENST00000628709 POTEGQ6S5H5 508 aa11.94□□□□□ -0.5
TRDN-206ENST00000628709 AKT1S1Q96B36 256 aa11.94□□□□□ -0.5
TRDN-206ENST00000628709 FXR2P51116 673 aaKnown RBP eCLIP11.93□□□□□ -0.5
TRDN-206ENST00000628709 GABBR2O75899 941 aa11.89□□□□□ -0.51
TRDN-206ENST00000628709 REM2Q8IYK8 340 aaPredicted RBP11.75□□□□□ -0.53
TRDN-206ENST00000628709 C19orf67A6NJJ6 358 aa11.63□□□□□ -0.55
TRDN-206ENST00000628709 PITPNM1O00562 1244 aa11.62□□□□□ -0.55
TRDN-206ENST00000628709 NCBP3Q53F19 620 aaKnown RBP11.55□□□□□ -0.56
TRDN-206ENST00000628709 POTEIP0CG38 1075 aa11.52□□□□□ -0.56
TRDN-206ENST00000628709 OTUD5Q96G74 571 aa11.49□□□□□ -0.57
TRDN-206ENST00000628709 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.47□□□□□ -0.57
TRDN-206ENST00000628709 HNRNPUL2Q1KMD3 747 aaKnown RBP11.47□□□□□ -0.57
TRDN-206ENST00000628709 PRKAR2AP13861 404 aaKnown RBP11.35□□□□□ -0.59
TRDN-206ENST00000628709 POLA2Q14181 598 aa11.32□□□□□ -0.6
TRDN-206ENST00000628709 NPM3O75607 178 aaKnown RBP11.31□□□□□ -0.6
TRDN-206ENST00000628709 CLCN6P51797 869 aa11.3□□□□□ -0.6
TRDN-206ENST00000628709 DCBLD2Q96PD2 775 aa11.28□□□□□ -0.6
TRDN-206ENST00000628709 SAMD1Q6SPF0 538 aaPredicted RBP11.27□□□□□ -0.61
TRDN-206ENST00000628709 ZBTB12Q9Y330 459 aaPredicted RBP11.14□□□□□ -0.63
TRDN-206ENST00000628709 CDAN1Q8IWY9 1227 aa11.09□□□□□ -0.63
TRDN-206ENST00000628709 FAM163AQ96GL9 167 aaPredicted RBP11.09□□□□□ -0.63
TRDN-206ENST00000628709 POTEB2H3BUK9 544 aa11.07□□□□□ -0.64
TRDN-206ENST00000628709 LCE2DQ5TA82 110 aaPredicted RBP11.07□□□□□ -0.64
TRDN-206ENST00000628709 KCNA4P22459 653 aa11.04□□□□□ -0.64
TRDN-206ENST00000628709 MMRN1Q13201 1228 aa11.02□□□□□ -0.64
TRDN-206ENST00000628709 OSCARQ8IYS5 282 aa10.99□□□□□ -0.65
TRDN-206ENST00000628709 MAMSTRQ6ZN01 415 aa10.93□□□□□ -0.66
TRDN-206ENST00000628709 SLC4A2P04920 1241 aa10.92□□□□□ -0.66
TRDN-206ENST00000628709 CD44P16070 742 aaKnown RBP10.89□□□□□ -0.67
TRDN-206ENST00000628709 CLEC11AQ9Y240 323 aa10.85□□□□□ -0.67
TRDN-206ENST00000628709 SPNS2Q8IVW8 549 aa10.84□□□□□ -0.67
TRDN-206ENST00000628709 SPDYE1Q8NFV5 336 aaPredicted RBP10.84□□□□□ -0.67
TRDN-206ENST00000628709 CHADLQ6NUI6 762 aa10.73□□□□□ -0.69
TRDN-206ENST00000628709 SCUBE2Q9NQ36 999 aa10.71□□□□□ -0.69
TRDN-206ENST00000628709 ZNF579Q8NAF0 562 aaKnown RBP10.65□□□□□ -0.7
TRDN-206ENST00000628709 POTEJP0CG39 1038 aa10.6□□□□□ -0.71
TRDN-206ENST00000628709 SPDYE2BA6NHP3 402 aa10.55□□□□□ -0.72
TRDN-206ENST00000628709 GALR2O43603 387 aaPredicted RBP10.55□□□□□ -0.72
TRDN-206ENST00000628709 SPDYE6P0CI01 402 aa10.55□□□□□ -0.72
TRDN-206ENST00000628709 SPDYE2Q495Y8 402 aa10.55□□□□□ -0.72
TRDN-206ENST00000628709 METRNQ9UJH8 293 aa10.53□□□□□ -0.72
TRDN-206ENST00000628709 MYCNP04198 464 aaPredicted RBP10.51□□□□□ -0.73
TRDN-206ENST00000628709 C7P10643 843 aa10.51□□□□□ -0.73
TRDN-206ENST00000628709 SLC39A7Q92504 469 aa10.5□□□□□ -0.73
TRDN-206ENST00000628709 FARP1Q9Y4F1 1045 aaPredicted RBP10.47□□□□□ -0.73
TRDN-206ENST00000628709 PELP1Q8IZL8 1130 aaKnown RBP10.47□□□□□ -0.73
TRDN-206ENST00000628709 ZRANB1Q9UGI0 708 aa10.46□□□□□ -0.74
TRDN-206ENST00000628709 SLC4A1APQ9BWU0 796 aaKnown RBP10.45□□□□□ -0.74
TRDN-206ENST00000628709 PRR29P0C7W0 189 aa10.44□□□□□ -0.74
TRDN-206ENST00000628709 FOXD4L1Q9NU39 408 aa10.38□□□□□ -0.75
TRDN-206ENST00000628709 ST18O60284 1047 aa10.33□□□□□ -0.76
TRDN-206ENST00000628709 ASTLQ6HA08 431 aaPredicted RBP10.27□□□□□ -0.77
TRDN-206ENST00000628709 TMEM121BQ9BXQ6 578 aaPredicted RBP10.19□□□□□ -0.78
TRDN-206ENST00000628709 ATMINO43313 823 aaPredicted RBP10.18□□□□□ -0.78
TRDN-206ENST00000628709 ATF5Q9Y2D1 282 aaPredicted RBP10.18□□□□□ -0.78
TRDN-206ENST00000628709 ZBTB22O15209 634 aa10.13□□□□□ -0.79
TRDN-206ENST00000628709 ATXN8OSP0DMR3 200 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms