RNA–Protein interactions for RNA: ENST00000627179.1

LINC01338-201, Transcript of long intergenic non-protein coding RNA 1338, humanhuman

TSL 3 BASIC

Gene LINC01338, Length 632 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01338-201ENST00000627179 CCDC61Q9Y6R9 512 aa14.29□□□□□ -0.12
LINC01338-201ENST00000627179 VASPP50552 380 aaPredicted RBP14.26□□□□□ -0.13
LINC01338-201ENST00000627179 NUBP1P53384 320 aa14.26□□□□□ -0.13
LINC01338-201ENST00000627179 KIF12Q96FN5 646 aa14.2□□□□□ -0.14
LINC01338-201ENST00000627179 MS4A3Q96HJ5 214 aa14.19□□□□□ -0.14
LINC01338-201ENST00000627179 FAM212AQ96EL1 285 aa14.17□□□□□ -0.14
LINC01338-201ENST00000627179 KLHL34Q8N239 644 aa14.15□□□□□ -0.14
LINC01338-201ENST00000627179 MAP3K13O43283 966 aa14.11□□□□□ -0.15
LINC01338-201ENST00000627179 SGIP1Q9BQI5 828 aa14.1□□□□□ -0.15
LINC01338-201ENST00000627179 LHX8Q68G74 356 aa14.09□□□□□ -0.15
LINC01338-201ENST00000627179 DCAF8Q5TAQ9 597 aa14.07□□□□□ -0.16
LINC01338-201ENST00000627179 ASTLQ6HA08 431 aaPredicted RBP14.07□□□□□ -0.16
LINC01338-201ENST00000627179 ATMINO43313 823 aaPredicted RBP14.03□□□□□ -0.16
LINC01338-201ENST00000627179 IFNLR1Q8IU57 520 aaPredicted RBP14.02□□□□□ -0.17
LINC01338-201ENST00000627179 GSE1Q14687 1217 aa14.01□□□□□ -0.17
LINC01338-201ENST00000627179 PCDHB13Q9Y5F0 798 aa14.01□□□□□ -0.17
LINC01338-201ENST00000627179 TIE1P35590 1138 aa13.99□□□□□ -0.17
LINC01338-201ENST00000627179 PELP1Q8IZL8 1130 aaKnown RBP13.99□□□□□ -0.17
LINC01338-201ENST00000627179 SPOCK2Q92563 424 aa13.97□□□□□ -0.17
LINC01338-201ENST00000627179 SLC39A7Q92504 469 aa13.96□□□□□ -0.17
LINC01338-201ENST00000627179 BMP2KQ9NSY1 1161 aaPredicted RBP13.96□□□□□ -0.17
LINC01338-201ENST00000627179 TRPC6Q9Y210 931 aa13.95□□□□□ -0.18
LINC01338-201ENST00000627179 C7P10643 843 aa13.94□□□□□ -0.18
LINC01338-201ENST00000627179 ATN1P54259 1190 aaPredicted RBP13.94□□□□□ -0.18
LINC01338-201ENST00000627179 PYGBP11216 843 aa13.93□□□□□ -0.18
LINC01338-201ENST00000627179 IFNL1Q8IU54 200 aa13.93□□□□□ -0.18
LINC01338-201ENST00000627179 METRNQ9UJH8 293 aa13.89□□□□□ -0.19
LINC01338-201ENST00000627179 TTLL13PA6NNM8 815 aa13.88□□□□□ -0.19
LINC01338-201ENST00000627179 CHRM1P11229 460 aaPredicted RBP13.88□□□□□ -0.19
LINC01338-201ENST00000627179 POTEB2H3BUK9 544 aa13.81□□□□□ -0.2
LINC01338-201ENST00000627179 CIZ1Q9ULV3 898 aaPredicted RBP13.81□□□□□ -0.2
LINC01338-201ENST00000627179 ZNF467Q7Z7K2 595 aaPredicted RBP13.8□□□□□ -0.2
LINC01338-201ENST00000627179 TMEM106CQ9BVX2 250 aa13.8□□□□□ -0.2
LINC01338-201ENST00000627179 PCDHB8Q9UN66 801 aa13.79□□□□□ -0.2
LINC01338-201ENST00000627179 TRIM35Q9UPQ4 493 aa13.79□□□□□ -0.2
LINC01338-201ENST00000627179 IER5LQ5T953 404 aa13.78□□□□□ -0.2
LINC01338-201ENST00000627179 TRIM41Q8WV44 630 aa13.73□□□□□ -0.21
LINC01338-201ENST00000627179 POTEFA5A3E0 1075 aa13.72□□□□□ -0.21
LINC01338-201ENST00000627179 OTUD5Q96G74 571 aa13.72□□□□□ -0.21
LINC01338-201ENST00000627179 SEC24BO95487 1268 aa13.71□□□□□ -0.21
LINC01338-201ENST00000627179 MAMSTRQ6ZN01 415 aa13.7□□□□□ -0.22
LINC01338-201ENST00000627179 COLQQ9Y215 455 aaPredicted RBP13.67□□□□□ -0.22
LINC01338-201ENST00000627179 POTEJP0CG39 1038 aa13.66□□□□□ -0.22
LINC01338-201ENST00000627179 PSEN1P49768 467 aa13.64□□□□□ -0.23
LINC01338-201ENST00000627179 PDAP1Q13442 181 aaKnown RBP13.62□□□□□ -0.23
LINC01338-201ENST00000627179 SCUBE2Q9NQ36 999 aa13.61□□□□□ -0.23
LINC01338-201ENST00000627179 PLCG2P16885 1265 aa13.6□□□□□ -0.23
LINC01338-201ENST00000627179 IRX5P78411 483 aaPredicted RBP13.6□□□□□ -0.23
LINC01338-201ENST00000627179 OCEL1Q9H607 264 aa13.58□□□□□ -0.24
LINC01338-201ENST00000627179 GOLGA2Q08379 1002 aa13.57□□□□□ -0.24
LINC01338-201ENST00000627179 MKRN3Q13064 507 aaKnown RBP13.54□□□□□ -0.24
LINC01338-201ENST00000627179 RIOK3O14730 519 aaKnown RBP13.47□□□□□ -0.25
LINC01338-201ENST00000627179 CABP2Q9NPB3 220 aa13.45□□□□□ -0.26
LINC01338-201ENST00000627179 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.44□□□□□ -0.26
LINC01338-201ENST00000627179 PDCD7Q8N8D1 485 aaKnown RBP13.43□□□□□ -0.26
LINC01338-201ENST00000627179 RNF25Q96BH1 459 aaPredicted RBP13.43□□□□□ -0.26
LINC01338-201ENST00000627179 VGFO15240 615 aaPredicted RBP13.42□□□□□ -0.26
LINC01338-201ENST00000627179 ILDR1Q86SU0 546 aaPredicted RBP13.42□□□□□ -0.26
LINC01338-201ENST00000627179 L3MBTL3Q96JM7 780 aaPredicted RBP13.39□□□□□ -0.27
LINC01338-201ENST00000627179 TAOK2Q9UL54 1235 aa13.39□□□□□ -0.27
LINC01338-201ENST00000627179 ECM2O94769 699 aaPredicted RBP13.36□□□□□ -0.27
LINC01338-201ENST00000627179 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.35□□□□□ -0.27
LINC01338-201ENST00000627179 SLAIN1Q8ND83 568 aa13.35□□□□□ -0.27
LINC01338-201ENST00000627179 ZFP91Q96JP5 570 aaPredicted RBP13.35□□□□□ -0.27
LINC01338-201ENST00000627179 PKD2Q13563 968 aa13.34□□□□□ -0.27
LINC01338-201ENST00000627179 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.34□□□□□ -0.27
LINC01338-201ENST00000627179 EFCAB3Q8N7B9 438 aa13.33□□□□□ -0.28
LINC01338-201ENST00000627179 SOX12O15370 315 aa13.29□□□□□ -0.28
LINC01338-201ENST00000627179 FAM163AQ96GL9 167 aaPredicted RBP13.28□□□□□ -0.28
LINC01338-201ENST00000627179 DPY19L2Q6NUT2 758 aa13.27□□□□□ -0.29
LINC01338-201ENST00000627179 C3orf67Q6ZVT6 689 aa13.27□□□□□ -0.29
LINC01338-201ENST00000627179 G3V3G9 751 aa13.24□□□□□ -0.29
LINC01338-201ENST00000627179 BOLA1Q9Y3E2 137 aa13.24□□□□□ -0.29
LINC01338-201ENST00000627179 POTEMA6NI47 508 aa13.22□□□□□ -0.29
LINC01338-201ENST00000627179 RGL2O15211 777 aa13.22□□□□□ -0.29
LINC01338-201ENST00000627179 BCL11BQ9C0K0 894 aaPredicted RBP13.22□□□□□ -0.29
LINC01338-201ENST00000627179 LCE2DQ5TA82 110 aaPredicted RBP13.21□□□□□ -0.29
LINC01338-201ENST00000627179 POTEGQ6S5H5 508 aa13.21□□□□□ -0.29
LINC01338-201ENST00000627179 SNPHO15079 494 aa13.19□□□□□ -0.3
LINC01338-201ENST00000627179 STK24Q9Y6E0 443 aa13.19□□□□□ -0.3
LINC01338-201ENST00000627179 STK25O00506 426 aa13.18□□□□□ -0.3
LINC01338-201ENST00000627179 TMEM121BQ9BXQ6 578 aaPredicted RBP13.17□□□□□ -0.3
LINC01338-201ENST00000627179 PHF8Q9UPP1 1060 aa13.15□□□□□ -0.3
LINC01338-201ENST00000627179 NLRP6P59044 892 aa13.14□□□□□ -0.31
LINC01338-201ENST00000627179 MS4A4AQ96JQ5 239 aa13.13□□□□□ -0.31
LINC01338-201ENST00000627179 ST18O60284 1047 aa13.11□□□□□ -0.31
LINC01338-201ENST00000627179 PCDH10Q9P2E7 1040 aa13.11□□□□□ -0.31
LINC01338-201ENST00000627179 MICALL2Q8IY33 904 aa13.08□□□□□ -0.32
LINC01338-201ENST00000627179 FBXO22Q8NEZ5 403 aa13.08□□□□□ -0.32
LINC01338-201ENST00000627179 MFRPQ9BY79 579 aa13.06□□□□□ -0.32
LINC01338-201ENST00000627179 HS6ST3Q8IZP7 471 aa12.99□□□□□ -0.33
LINC01338-201ENST00000627179 TMEM92Q6UXU6 159 aa12.95□□□□□ -0.34
LINC01338-201ENST00000627179 DOK7Q18PE1 504 aa12.93□□□□□ -0.34
LINC01338-201ENST00000627179 CHGAP10645 457 aaKnown RBP12.92□□□□□ -0.34
LINC01338-201ENST00000627179 HOXB3P14651 431 aaPredicted RBP12.92□□□□□ -0.34
LINC01338-201ENST00000627179 DNAJC5Q9H3Z4 198 aa12.9□□□□□ -0.34
LINC01338-201ENST00000627179 CDAN1Q8IWY9 1227 aa12.89□□□□□ -0.35
LINC01338-201ENST00000627179 ZNF710Q8N1W2 664 aa12.89□□□□□ -0.35
LINC01338-201ENST00000627179 MARVELD3Q96A59 401 aa12.89□□□□□ -0.35
LINC01338-201ENST00000627179 PLSCR2Q9NRY7 297 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms