RNA–Protein interactions for RNA: ENST00000627179.1

LINC01338-201, Transcript of long intergenic non-protein coding RNA 1338, humanhuman

TSL 3 BASIC

Gene LINC01338, Length 632 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01338-201ENST00000627179 AEBP2Q6ZN18 517 aaPredicted RBP28.63■■■□□ 2.17
LINC01338-201ENST00000627179 CHIC1Q5VXU3 224 aa27.52■■■□□ 2
LINC01338-201ENST00000627179 SENP3Q9H4L4 574 aaPredicted RBP24.45■■□□□ 1.5
LINC01338-201ENST00000627179 PHF23Q9BUL5 403 aaPredicted RBP24.16■■□□□ 1.46
LINC01338-201ENST00000627179 FOXD1Q16676 465 aa22.71■■□□□ 1.23
LINC01338-201ENST00000627179 PLPPR3Q6T4P5 718 aa22.14■■□□□ 1.13
LINC01338-201ENST00000627179 PPP6R1Q9UPN7 881 aa21.43■■□□□ 1.02
LINC01338-201ENST00000627179 ADRA2BP18089 450 aa21.37■■□□□ 1.01
LINC01338-201ENST00000627179 PIAS4Q8N2W9 510 aaPredicted RBP21.28■■□□□ 1
LINC01338-201ENST00000627179 MSH5O43196 834 aa21.22■□□□□ 0.99
LINC01338-201ENST00000627179 POTEDQ86YR6 584 aa20.16■□□□□ 0.82
LINC01338-201ENST00000627179 SCAF1Q9H7N4 1312 aaKnown RBP19.68■□□□□ 0.74
LINC01338-201ENST00000627179 MAPK8IP2Q13387 824 aaPredicted RBP19.54■□□□□ 0.72
LINC01338-201ENST00000627179 PPP4R3CPQ6ZMV5 832 aa19.42■□□□□ 0.7
LINC01338-201ENST00000627179 DMRT2Q9Y5R5 561 aa19.42■□□□□ 0.7
LINC01338-201ENST00000627179 CNKSR2Q8WXI2 1034 aa19.02■□□□□ 0.64
LINC01338-201ENST00000627179 HOXD11P31277 338 aaPredicted RBP18.84■□□□□ 0.61
LINC01338-201ENST00000627179 NCBP3Q53F19 620 aaKnown RBP18.81■□□□□ 0.6
LINC01338-201ENST00000627179 RNF216Q9NWF9 866 aaPredicted RBP18.78■□□□□ 0.6
LINC01338-201ENST00000627179 DCAF8L1A6NGE4 600 aa18.56■□□□□ 0.56
LINC01338-201ENST00000627179 NPM3O75607 178 aaKnown RBP18.47■□□□□ 0.55
LINC01338-201ENST00000627179 KCNA4P22459 653 aa18.33■□□□□ 0.52
LINC01338-201ENST00000627179 DNAJC5BQ9UF47 199 aa18.21■□□□□ 0.51
LINC01338-201ENST00000627179 RNF39Q9H2S5 420 aa18.1■□□□□ 0.49
LINC01338-201ENST00000627179 CACNB1Q02641 598 aaPredicted RBP18■□□□□ 0.47
LINC01338-201ENST00000627179 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.93■□□□□ 0.46
LINC01338-201ENST00000627179 C1QBPQ07021 282 aaKnown RBP17.89■□□□□ 0.45
LINC01338-201ENST00000627179 SLC4A2P04920 1241 aa17.55■□□□□ 0.4
LINC01338-201ENST00000627179 U3KPZ7 1027 aaPredicted RBP17.55■□□□□ 0.4
LINC01338-201ENST00000627179 SLC4A1APQ9BWU0 796 aaKnown RBP17.39■□□□□ 0.37
LINC01338-201ENST00000627179 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.25■□□□□ 0.35
LINC01338-201ENST00000627179 HNRNPUL2Q1KMD3 747 aaKnown RBP17.25■□□□□ 0.35
LINC01338-201ENST00000627179 APLP2Q06481 763 aa17.21■□□□□ 0.35
LINC01338-201ENST00000627179 SPINK5Q9NQ38 1064 aaPredicted RBP17.2■□□□□ 0.34
LINC01338-201ENST00000627179 CAPN15O75808 1086 aa17.18■□□□□ 0.34
LINC01338-201ENST00000627179 SAMD1Q6SPF0 538 aaPredicted RBP17.14■□□□□ 0.33
LINC01338-201ENST00000627179 MYCNP04198 464 aaPredicted RBP17.11■□□□□ 0.33
LINC01338-201ENST00000627179 FOXD4L1Q9NU39 408 aa17.07■□□□□ 0.32
LINC01338-201ENST00000627179 DSG3P32926 999 aa17.03■□□□□ 0.32
LINC01338-201ENST00000627179 ZNF219Q9P2Y4 722 aaPredicted RBP17.01■□□□□ 0.31
LINC01338-201ENST00000627179 TRHP20396 242 aaPredicted RBP16.97■□□□□ 0.31
LINC01338-201ENST00000627179 ZBTB22O15209 634 aa16.84■□□□□ 0.29
LINC01338-201ENST00000627179 ABCB7O75027 752 aa16.76■□□□□ 0.27
LINC01338-201ENST00000627179 ATF5Q9Y2D1 282 aaPredicted RBP16.62■□□□□ 0.25
LINC01338-201ENST00000627179 POLA2Q14181 598 aa16.59■□□□□ 0.25
LINC01338-201ENST00000627179 ATXN8OSP0DMR3 200 aa16.58■□□□□ 0.24
LINC01338-201ENST00000627179 CSRNP3Q8WYN3 585 aa16.35■□□□□ 0.21
LINC01338-201ENST00000627179 ZBTB12Q9Y330 459 aaPredicted RBP16.35■□□□□ 0.21
LINC01338-201ENST00000627179 RBM42Q9BTD8 480 aaKnown RBP16.3■□□□□ 0.2
LINC01338-201ENST00000627179 EHMT2Q96KQ7 1210 aa16.23■□□□□ 0.19
LINC01338-201ENST00000627179 FBLN2P98095 1184 aa16.03■□□□□ 0.16
LINC01338-201ENST00000627179 OSCARQ8IYS5 282 aa16■□□□□ 0.15
LINC01338-201ENST00000627179 AKT1S1Q96B36 256 aa15.97■□□□□ 0.15
LINC01338-201ENST00000627179 MKRN4PQ13434 485 aaPredicted RBP15.89■□□□□ 0.13
LINC01338-201ENST00000627179 POTEHQ6S545 545 aa15.87■□□□□ 0.13
LINC01338-201ENST00000627179 SPDYE2BA6NHP3 402 aa15.84■□□□□ 0.13
LINC01338-201ENST00000627179 SPDYE6P0CI01 402 aa15.84■□□□□ 0.13
LINC01338-201ENST00000627179 SPDYE2Q495Y8 402 aa15.84■□□□□ 0.13
LINC01338-201ENST00000627179 REM2Q8IYK8 340 aaPredicted RBP15.78■□□□□ 0.12
LINC01338-201ENST00000627179 CHRDL2Q6WN34 429 aa15.77■□□□□ 0.12
LINC01338-201ENST00000627179 ZNF692Q9BU19 519 aaPredicted RBP15.67■□□□□ 0.1
LINC01338-201ENST00000627179 SSUH2Q9Y2M2 353 aa15.64■□□□□ 0.09
LINC01338-201ENST00000627179 PITPNM1O00562 1244 aa15.59■□□□□ 0.09
LINC01338-201ENST00000627179 SPDYE1Q8NFV5 336 aaPredicted RBP15.49■□□□□ 0.07
LINC01338-201ENST00000627179 PIP4P2Q8N4L2 257 aa15.45■□□□□ 0.06
LINC01338-201ENST00000627179 FXR2P51116 673 aaKnown RBP eCLIP15.43■□□□□ 0.06
LINC01338-201ENST00000627179 PABPN1Q86U42 306 aaKnown RBP eCLIP15.43■□□□□ 0.06
LINC01338-201ENST00000627179 CLEC11AQ9Y240 323 aa15.4■□□□□ 0.06
LINC01338-201ENST00000627179 SPDYE4A6NLX3 237 aa15.31■□□□□ 0.04
LINC01338-201ENST00000627179 PRR29P0C7W0 189 aa15.22■□□□□ 0.03
LINC01338-201ENST00000627179 PRKAR2AP13861 404 aaKnown RBP15.2■□□□□ 0.02
LINC01338-201ENST00000627179 STAG3Q9UJ98 1225 aa15.15■□□□□ 0.02
LINC01338-201ENST00000627179 HAX1O00165 279 aa15.1■□□□□ 0.01
LINC01338-201ENST00000627179 CHADLQ6NUI6 762 aa15.05■□□□□ -0
LINC01338-201ENST00000627179 SP7Q8TDD2 431 aaPredicted RBP15.02■□□□□ -0
LINC01338-201ENST00000627179 PROM2Q8N271 834 aa15.01□□□□□ -0.01
LINC01338-201ENST00000627179 C19orf67A6NJJ6 358 aa14.93□□□□□ -0.02
LINC01338-201ENST00000627179 FARP1Q9Y4F1 1045 aaPredicted RBP14.91□□□□□ -0.02
LINC01338-201ENST00000627179 EVX2Q03828 476 aa14.89□□□□□ -0.03
LINC01338-201ENST00000627179 CREBZFQ9NS37 354 aa14.88□□□□□ -0.03
LINC01338-201ENST00000627179 FKBP8Q14318 412 aa14.8□□□□□ -0.04
LINC01338-201ENST00000627179 CD44P16070 742 aaKnown RBP14.73□□□□□ -0.05
LINC01338-201ENST00000627179 NPM1P06748 294 aaKnown RBP eCLIP14.69□□□□□ -0.06
LINC01338-201ENST00000627179 MNX1P50219 401 aaPredicted RBP14.67□□□□□ -0.06
LINC01338-201ENST00000627179 GABBR2O75899 941 aa14.63□□□□□ -0.07
LINC01338-201ENST00000627179 CLCN6P51797 869 aa14.61□□□□□ -0.07
LINC01338-201ENST00000627179 PLEKHG5O94827 1062 aa14.6□□□□□ -0.07
LINC01338-201ENST00000627179 MIER1Q8N108 512 aa14.58□□□□□ -0.08
LINC01338-201ENST00000627179 ZRANB1Q9UGI0 708 aa14.57□□□□□ -0.08
LINC01338-201ENST00000627179 PAK3O75914 559 aaPredicted RBP14.56□□□□□ -0.08
LINC01338-201ENST00000627179 ZNF579Q8NAF0 562 aaKnown RBP14.54□□□□□ -0.08
LINC01338-201ENST00000627179 FBXO3Q9UK99 471 aa14.51□□□□□ -0.09
LINC01338-201ENST00000627179 PLCD3Q8N3E9 789 aa14.5□□□□□ -0.09
LINC01338-201ENST00000627179 ZBTB47Q9UFB7 747 aaPredicted RBP14.44□□□□□ -0.1
LINC01338-201ENST00000627179 PHF12Q96QT6 1004 aa14.35□□□□□ -0.11
LINC01338-201ENST00000627179 TSPYL2Q9H2G4 693 aaPredicted RBP14.35□□□□□ -0.11
LINC01338-201ENST00000627179 RASEFQ8IZ41 740 aa14.3□□□□□ -0.12
LINC01338-201ENST00000627179 DCBLD2Q96PD2 775 aa14.3□□□□□ -0.12
LINC01338-201ENST00000627179 GALR2O43603 387 aaPredicted RBP14.29□□□□□ -0.12
LINC01338-201ENST00000627179 POTEIP0CG38 1075 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms