RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 BBXQ8WY36 941 aaPredicted RBP10.09□□□□□ -0.79
CDR1-202ENST00000625883 RNF25Q96BH1 459 aaPredicted RBP10.08□□□□□ -0.8
CDR1-202ENST00000625883 DCAF8Q5TAQ9 597 aa10.07□□□□□ -0.8
CDR1-202ENST00000625883 PAK3O75914 559 aaPredicted RBP10.06□□□□□ -0.8
CDR1-202ENST00000625883 RASEFQ8IZ41 740 aa10.06□□□□□ -0.8
CDR1-202ENST00000625883 HAX1O00165 279 aa10.04□□□□□ -0.8
CDR1-202ENST00000625883 FAM212AQ96EL1 285 aa10.04□□□□□ -0.8
CDR1-202ENST00000625883 HAP1P54257 671 aaPredicted RBP10.04□□□□□ -0.8
CDR1-202ENST00000625883 CHGAP10645 457 aaKnown RBP10.02□□□□□ -0.81
CDR1-202ENST00000625883 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.02□□□□□ -0.81
CDR1-202ENST00000625883 C19orf67A6NJJ6 358 aa9.98□□□□□ -0.81
CDR1-202ENST00000625883 CD44P16070 742 aaKnown RBP9.98□□□□□ -0.81
CDR1-202ENST00000625883 PAXIP1Q6ZW49 1069 aaPredicted RBP9.98□□□□□ -0.81
CDR1-202ENST00000625883 HS6ST3Q8IZP7 471 aa9.98□□□□□ -0.81
CDR1-202ENST00000625883 RIOK3O14730 519 aaKnown RBP9.97□□□□□ -0.81
CDR1-202ENST00000625883 CHRM1P11229 460 aaPredicted RBP9.97□□□□□ -0.81
CDR1-202ENST00000625883 CFAP44Q96MT7 982 aa9.96□□□□□ -0.82
CDR1-202ENST00000625883 PYGBP11216 843 aa9.92□□□□□ -0.82
CDR1-202ENST00000625883 SPRYD3Q8NCJ5 442 aa9.92□□□□□ -0.82
CDR1-202ENST00000625883 CLCN6P51797 869 aa9.91□□□□□ -0.82
CDR1-202ENST00000625883 DNAJC5Q9H3Z4 198 aa9.91□□□□□ -0.82
CDR1-202ENST00000625883 ZRANB1Q9UGI0 708 aa9.91□□□□□ -0.82
CDR1-202ENST00000625883 TSPYL2Q9H2G4 693 aaPredicted RBP9.91□□□□□ -0.82
CDR1-202ENST00000625883 VGFO15240 615 aaPredicted RBP9.9□□□□□ -0.83
CDR1-202ENST00000625883 VSIG10Q8N0Z9 540 aa9.9□□□□□ -0.83
CDR1-202ENST00000625883 TAOK2Q9UL54 1235 aa9.89□□□□□ -0.83
CDR1-202ENST00000625883 NKX1-1Q15270 411 aaPredicted RBP9.86□□□□□ -0.83
CDR1-202ENST00000625883 SGIP1Q9BQI5 828 aa9.86□□□□□ -0.83
CDR1-202ENST00000625883 ZNF579Q8NAF0 562 aaKnown RBP9.85□□□□□ -0.83
CDR1-202ENST00000625883 KDM2AQ9Y2K7 1162 aa9.85□□□□□ -0.83
CDR1-202ENST00000625883 STK25O00506 426 aa9.85□□□□□ -0.83
CDR1-202ENST00000625883 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.84□□□□□ -0.83
CDR1-202ENST00000625883 ZFP91Q96JP5 570 aaPredicted RBP9.84□□□□□ -0.83
CDR1-202ENST00000625883 TSHZ2Q9NRE2 1034 aa9.84□□□□□ -0.83
CDR1-202ENST00000625883 CCDC61Q9Y6R9 512 aa9.82□□□□□ -0.84
CDR1-202ENST00000625883 SP7Q8TDD2 431 aaPredicted RBP9.81□□□□□ -0.84
CDR1-202ENST00000625883 BCL11BQ9C0K0 894 aaPredicted RBP9.8□□□□□ -0.84
CDR1-202ENST00000625883 GTPBP6O43824 516 aaPredicted RBP9.79□□□□□ -0.84
CDR1-202ENST00000625883 EVX2Q03828 476 aa9.79□□□□□ -0.84
CDR1-202ENST00000625883 STK24Q9Y6E0 443 aa9.79□□□□□ -0.84
CDR1-202ENST00000625883 ZNF467Q7Z7K2 595 aaPredicted RBP9.77□□□□□ -0.85
CDR1-202ENST00000625883 PHF12Q96QT6 1004 aa9.76□□□□□ -0.85
CDR1-202ENST00000625883 PCDHB8Q9UN66 801 aa9.75□□□□□ -0.85
CDR1-202ENST00000625883 PCDHB13Q9Y5F0 798 aa9.75□□□□□ -0.85
CDR1-202ENST00000625883 KIF12Q96FN5 646 aa9.73□□□□□ -0.85
CDR1-202ENST00000625883 PDAP1Q13442 181 aaKnown RBP9.72□□□□□ -0.85
CDR1-202ENST00000625883 GABBR2O75899 941 aa9.71□□□□□ -0.86
CDR1-202ENST00000625883 MAP3K13O43283 966 aa9.7□□□□□ -0.86
CDR1-202ENST00000625883 BCANQ96GW7 911 aa9.69□□□□□ -0.86
CDR1-202ENST00000625883 IFNL1Q8IU54 200 aa9.68□□□□□ -0.86
CDR1-202ENST00000625883 PSEN1P49768 467 aa9.67□□□□□ -0.86
CDR1-202ENST00000625883 MS4A3Q96HJ5 214 aa9.66□□□□□ -0.86
CDR1-202ENST00000625883 DCBLD2Q96PD2 775 aa9.65□□□□□ -0.87
CDR1-202ENST00000625883 RYDENQ9NUL5 291 aaKnown RBP9.65□□□□□ -0.87
CDR1-202ENST00000625883 GALR2O43603 387 aaPredicted RBP9.63□□□□□ -0.87
CDR1-202ENST00000625883 TIE1P35590 1138 aa9.59□□□□□ -0.87
CDR1-202ENST00000625883 MFRPQ9BY79 579 aa9.59□□□□□ -0.87
CDR1-202ENST00000625883 EFCAB3Q8N7B9 438 aa9.56□□□□□ -0.88
CDR1-202ENST00000625883 CABP2Q9NPB3 220 aa9.55□□□□□ -0.88
CDR1-202ENST00000625883 FBXO22Q8NEZ5 403 aa9.53□□□□□ -0.88
CDR1-202ENST00000625883 TMEM106CQ9BVX2 250 aa9.53□□□□□ -0.88
CDR1-202ENST00000625883 GOLGA2Q08379 1002 aa9.53□□□□□ -0.88
CDR1-202ENST00000625883 CADPS2Q86UW7 1296 aa9.53□□□□□ -0.88
CDR1-202ENST00000625883 ASTLQ6HA08 431 aaPredicted RBP9.52□□□□□ -0.89
CDR1-202ENST00000625883 TRPC6Q9Y210 931 aa9.52□□□□□ -0.89
CDR1-202ENST00000625883 SOX12O15370 315 aa9.51□□□□□ -0.89
CDR1-202ENST00000625883 BMP2KQ9NSY1 1161 aaPredicted RBP9.51□□□□□ -0.89
CDR1-202ENST00000625883 PHF8Q9UPP1 1060 aa9.51□□□□□ -0.89
CDR1-202ENST00000625883 TTLL13PA6NNM8 815 aa9.5□□□□□ -0.89
CDR1-202ENST00000625883 PPP1R37O75864 691 aa9.5□□□□□ -0.89
CDR1-202ENST00000625883 ATMINO43313 823 aaPredicted RBP9.49□□□□□ -0.89
CDR1-202ENST00000625883 NLRP6P59044 892 aa9.49□□□□□ -0.89
CDR1-202ENST00000625883 PRKCSHP14314 528 aaPredicted RBP9.47□□□□□ -0.89
CDR1-202ENST00000625883 SLC39A7Q92504 469 aa9.46□□□□□ -0.9
CDR1-202ENST00000625883 ATN1P54259 1190 aaPredicted RBP9.45□□□□□ -0.9
CDR1-202ENST00000625883 MKRN3Q13064 507 aaKnown RBP9.45□□□□□ -0.9
CDR1-202ENST00000625883 NBR1Q14596 966 aa9.45□□□□□ -0.9
CDR1-202ENST00000625883 IER5LQ5T953 404 aa9.45□□□□□ -0.9
CDR1-202ENST00000625883 MS4A4AQ96JQ5 239 aa9.45□□□□□ -0.9
CDR1-202ENST00000625883 TRIM35Q9UPQ4 493 aa9.45□□□□□ -0.9
CDR1-202ENST00000625883 C7P10643 843 aa9.43□□□□□ -0.9
CDR1-202ENST00000625883 POTEIP0CG38 1075 aa9.41□□□□□ -0.9
CDR1-202ENST00000625883 TPRNQ4KMQ1 711 aa9.4□□□□□ -0.91
CDR1-202ENST00000625883 SEC24BO95487 1268 aa9.39□□□□□ -0.91
CDR1-202ENST00000625883 KCNV2Q8TDN2 545 aa9.38□□□□□ -0.91
CDR1-202ENST00000625883 METRNQ9UJH8 293 aa9.38□□□□□ -0.91
CDR1-202ENST00000625883 P3H3Q8IVL6 736 aa9.37□□□□□ -0.91
CDR1-202ENST00000625883 WDR70Q9NW82 654 aa9.37□□□□□ -0.91
CDR1-202ENST00000625883 PLCG2P16885 1265 aa9.35□□□□□ -0.91
CDR1-202ENST00000625883 ILDR1Q86SU0 546 aaPredicted RBP9.35□□□□□ -0.91
CDR1-202ENST00000625883 PELP1Q8IZL8 1130 aaKnown RBP9.35□□□□□ -0.91
CDR1-202ENST00000625883 OCEL1Q9H607 264 aa9.34□□□□□ -0.91
CDR1-202ENST00000625883 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.34□□□□□ -0.91
CDR1-202ENST00000625883 NCKAP5LQ9HCH0 1330 aa9.33□□□□□ -0.92
CDR1-202ENST00000625883 IRX5P78411 483 aaPredicted RBP9.3□□□□□ -0.92
CDR1-202ENST00000625883 CRISPLD2Q9H0B8 497 aa9.29□□□□□ -0.92
CDR1-202ENST00000625883 G3V3G9 751 aa9.28□□□□□ -0.92
CDR1-202ENST00000625883 MFSD10Q14728 455 aa9.28□□□□□ -0.92
CDR1-202ENST00000625883 E2F4Q16254 413 aa9.28□□□□□ -0.92
CDR1-202ENST00000625883 PDE4AP27815 886 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms