RNA–Protein interactions for RNA: ENST00000624116.1

AC004943.3-201, humanhuman

BASIC

Gene AC004943.3, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004943.3-201ENST00000624116 LHX8Q68G74 356 aa15.27■□□□□ 0.04
AC004943.3-201ENST00000624116 RASEFQ8IZ41 740 aa15.25■□□□□ 0.03
AC004943.3-201ENST00000624116 MS4A3Q96HJ5 214 aa15.22■□□□□ 0.03
AC004943.3-201ENST00000624116 KIF12Q96FN5 646 aa15.18■□□□□ 0.02
AC004943.3-201ENST00000624116 FAM212AQ96EL1 285 aa15.17■□□□□ 0.02
AC004943.3-201ENST00000624116 NUBP1P53384 320 aa15.16■□□□□ 0.02
AC004943.3-201ENST00000624116 VASPP50552 380 aaPredicted RBP15.12■□□□□ 0.01
AC004943.3-201ENST00000624116 ASTLQ6HA08 431 aaPredicted RBP15.12■□□□□ 0.01
AC004943.3-201ENST00000624116 SGIP1Q9BQI5 828 aa15.09■□□□□ 0.01
AC004943.3-201ENST00000624116 MAP3K13O43283 966 aa15.08■□□□□ 0
AC004943.3-201ENST00000624116 ATMINO43313 823 aaPredicted RBP15.06■□□□□ 0
AC004943.3-201ENST00000624116 KLHL34Q8N239 644 aa15.05■□□□□ -0
AC004943.3-201ENST00000624116 SLC39A7Q92504 469 aa15.03■□□□□ -0
AC004943.3-201ENST00000624116 C7P10643 843 aa15.01□□□□□ -0.01
AC004943.3-201ENST00000624116 TIE1P35590 1138 aa15.01□□□□□ -0.01
AC004943.3-201ENST00000624116 PCDHB13Q9Y5F0 798 aa15.01□□□□□ -0.01
AC004943.3-201ENST00000624116 DCAF8Q5TAQ9 597 aa14.99□□□□□ -0.01
AC004943.3-201ENST00000624116 PELP1Q8IZL8 1130 aaKnown RBP14.99□□□□□ -0.01
AC004943.3-201ENST00000624116 METRNQ9UJH8 293 aa14.98□□□□□ -0.01
AC004943.3-201ENST00000624116 BMP2KQ9NSY1 1161 aaPredicted RBP14.96□□□□□ -0.01
AC004943.3-201ENST00000624116 ATN1P54259 1190 aaPredicted RBP14.95□□□□□ -0.02
AC004943.3-201ENST00000624116 GSE1Q14687 1217 aa14.94□□□□□ -0.02
AC004943.3-201ENST00000624116 TRPC6Q9Y210 931 aa14.9□□□□□ -0.02
AC004943.3-201ENST00000624116 IFNL1Q8IU54 200 aa14.89□□□□□ -0.03
AC004943.3-201ENST00000624116 TTLL13PA6NNM8 815 aa14.88□□□□□ -0.03
AC004943.3-201ENST00000624116 PYGBP11216 843 aa14.86□□□□□ -0.03
AC004943.3-201ENST00000624116 POTEB2H3BUK9 544 aa14.83□□□□□ -0.04
AC004943.3-201ENST00000624116 SPOCK2Q92563 424 aa14.82□□□□□ -0.04
AC004943.3-201ENST00000624116 MAMSTRQ6ZN01 415 aa14.81□□□□□ -0.04
AC004943.3-201ENST00000624116 IFNLR1Q8IU57 520 aaPredicted RBP14.81□□□□□ -0.04
AC004943.3-201ENST00000624116 IER5LQ5T953 404 aa14.8□□□□□ -0.04
AC004943.3-201ENST00000624116 TRIM35Q9UPQ4 493 aa14.8□□□□□ -0.04
AC004943.3-201ENST00000624116 OTUD5Q96G74 571 aa14.79□□□□□ -0.04
AC004943.3-201ENST00000624116 SEC24BO95487 1268 aa14.78□□□□□ -0.04
AC004943.3-201ENST00000624116 TMEM106CQ9BVX2 250 aa14.78□□□□□ -0.04
AC004943.3-201ENST00000624116 ZNF467Q7Z7K2 595 aaPredicted RBP14.76□□□□□ -0.05
AC004943.3-201ENST00000624116 CHRM1P11229 460 aaPredicted RBP14.75□□□□□ -0.05
AC004943.3-201ENST00000624116 SCUBE2Q9NQ36 999 aa14.72□□□□□ -0.05
AC004943.3-201ENST00000624116 PCDHB8Q9UN66 801 aa14.7□□□□□ -0.06
AC004943.3-201ENST00000624116 CIZ1Q9ULV3 898 aaPredicted RBP14.69□□□□□ -0.06
AC004943.3-201ENST00000624116 POTEFA5A3E0 1075 aa14.67□□□□□ -0.06
AC004943.3-201ENST00000624116 POTEJP0CG39 1038 aa14.64□□□□□ -0.07
AC004943.3-201ENST00000624116 COLQQ9Y215 455 aaPredicted RBP14.64□□□□□ -0.07
AC004943.3-201ENST00000624116 PLCG2P16885 1265 aa14.63□□□□□ -0.07
AC004943.3-201ENST00000624116 TRIM41Q8WV44 630 aa14.61□□□□□ -0.07
AC004943.3-201ENST00000624116 GOLGA2Q08379 1002 aa14.6□□□□□ -0.07
AC004943.3-201ENST00000624116 IRX5P78411 483 aaPredicted RBP14.56□□□□□ -0.08
AC004943.3-201ENST00000624116 OCEL1Q9H607 264 aa14.55□□□□□ -0.08
AC004943.3-201ENST00000624116 PSEN1P49768 467 aa14.54□□□□□ -0.08
AC004943.3-201ENST00000624116 PDAP1Q13442 181 aaKnown RBP14.54□□□□□ -0.08
AC004943.3-201ENST00000624116 MKRN3Q13064 507 aaKnown RBP14.52□□□□□ -0.09
AC004943.3-201ENST00000624116 SLAIN1Q8ND83 568 aa14.38□□□□□ -0.11
AC004943.3-201ENST00000624116 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.38□□□□□ -0.11
AC004943.3-201ENST00000624116 PDCD7Q8N8D1 485 aaKnown RBP14.37□□□□□ -0.11
AC004943.3-201ENST00000624116 L3MBTL3Q96JM7 780 aaPredicted RBP14.37□□□□□ -0.11
AC004943.3-201ENST00000624116 CABP2Q9NPB3 220 aa14.37□□□□□ -0.11
AC004943.3-201ENST00000624116 POTEMA6NI47 508 aa14.36□□□□□ -0.11
AC004943.3-201ENST00000624116 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.35□□□□□ -0.11
AC004943.3-201ENST00000624116 FAM163AQ96GL9 167 aaPredicted RBP14.33□□□□□ -0.12
AC004943.3-201ENST00000624116 RIOK3O14730 519 aaKnown RBP14.32□□□□□ -0.12
AC004943.3-201ENST00000624116 POTEGQ6S5H5 508 aa14.32□□□□□ -0.12
AC004943.3-201ENST00000624116 C3orf67Q6ZVT6 689 aa14.31□□□□□ -0.12
AC004943.3-201ENST00000624116 ILDR1Q86SU0 546 aaPredicted RBP14.3□□□□□ -0.12
AC004943.3-201ENST00000624116 TAOK2Q9UL54 1235 aa14.29□□□□□ -0.12
AC004943.3-201ENST00000624116 VGFO15240 615 aaPredicted RBP14.27□□□□□ -0.13
AC004943.3-201ENST00000624116 G3V3G9 751 aa14.26□□□□□ -0.13
AC004943.3-201ENST00000624116 SNPHO15079 494 aa14.24□□□□□ -0.13
AC004943.3-201ENST00000624116 PCDH10Q9P2E7 1040 aa14.24□□□□□ -0.13
AC004943.3-201ENST00000624116 RNF25Q96BH1 459 aaPredicted RBP14.23□□□□□ -0.13
AC004943.3-201ENST00000624116 LCE2DQ5TA82 110 aaPredicted RBP14.22□□□□□ -0.13
AC004943.3-201ENST00000624116 EFCAB3Q8N7B9 438 aa14.19□□□□□ -0.14
AC004943.3-201ENST00000624116 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.18□□□□□ -0.14
AC004943.3-201ENST00000624116 ZFP91Q96JP5 570 aaPredicted RBP14.18□□□□□ -0.14
AC004943.3-201ENST00000624116 BOLA1Q9Y3E2 137 aa14.17□□□□□ -0.14
AC004943.3-201ENST00000624116 SOX12O15370 315 aa14.15□□□□□ -0.14
AC004943.3-201ENST00000624116 ECM2O94769 699 aaPredicted RBP14.15□□□□□ -0.14
AC004943.3-201ENST00000624116 DPY19L2Q6NUT2 758 aa14.13□□□□□ -0.15
AC004943.3-201ENST00000624116 ST18O60284 1047 aa14.12□□□□□ -0.15
AC004943.3-201ENST00000624116 TMEM121BQ9BXQ6 578 aaPredicted RBP14.12□□□□□ -0.15
AC004943.3-201ENST00000624116 PLSCR2Q9NRY7 297 aa14.09□□□□□ -0.15
AC004943.3-201ENST00000624116 BCL11BQ9C0K0 894 aaPredicted RBP14.06□□□□□ -0.16
AC004943.3-201ENST00000624116 PKD2Q13563 968 aa14.04□□□□□ -0.16
AC004943.3-201ENST00000624116 STK24Q9Y6E0 443 aa14.03□□□□□ -0.16
AC004943.3-201ENST00000624116 STK25O00506 426 aa14.02□□□□□ -0.17
AC004943.3-201ENST00000624116 NLRP6P59044 892 aa14□□□□□ -0.17
AC004943.3-201ENST00000624116 PHF8Q9UPP1 1060 aa13.99□□□□□ -0.17
AC004943.3-201ENST00000624116 MICALL2Q8IY33 904 aa13.98□□□□□ -0.17
AC004943.3-201ENST00000624116 RGL2O15211 777 aa13.96□□□□□ -0.17
AC004943.3-201ENST00000624116 CDAN1Q8IWY9 1227 aa13.95□□□□□ -0.18
AC004943.3-201ENST00000624116 MS4A4AQ96JQ5 239 aa13.95□□□□□ -0.18
AC004943.3-201ENST00000624116 DOK7Q18PE1 504 aa13.91□□□□□ -0.18
AC004943.3-201ENST00000624116 EMP3P54852 163 aa13.89□□□□□ -0.19
AC004943.3-201ENST00000624116 ZNF710Q8N1W2 664 aa13.89□□□□□ -0.19
AC004943.3-201ENST00000624116 FBXO22Q8NEZ5 403 aa13.89□□□□□ -0.19
AC004943.3-201ENST00000624116 MARVELD3Q96A59 401 aa13.89□□□□□ -0.19
AC004943.3-201ENST00000624116 RIMBP2O15034 1052 aa13.87□□□□□ -0.19
AC004943.3-201ENST00000624116 MFRPQ9BY79 579 aa13.87□□□□□ -0.19
AC004943.3-201ENST00000624116 HOXB3P14651 431 aaPredicted RBP13.83□□□□□ -0.2
AC004943.3-201ENST00000624116 TMEM92Q6UXU6 159 aa13.8□□□□□ -0.2
AC004943.3-201ENST00000624116 ZSWIM6Q9HCJ5 1215 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms