RNA–Protein interactions for RNA: ENST00000623196.1

C9orf139-202, Transcript of chromosome 9 open reading frame 139, humanhuman

TSL 2 BASIC

Gene C9orf139, Length 4,990 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139-202ENST00000623196 WDR43Q15061 677 aaKnown RBP eCLIP19.85■□□□□ 0.77
C9orf139-202ENST00000623196 NACADO15069 1562 aa19.84■□□□□ 0.77
C9orf139-202ENST00000623196 ABCC8Q09428 1581 aa19.84■□□□□ 0.77
C9orf139-202ENST00000623196 CEP164Q9UPV0 1460 aa19.84■□□□□ 0.77
C9orf139-202ENST00000623196 CCDC88BA6NC98 1476 aa19.8■□□□□ 0.76
C9orf139-202ENST00000623196 SIN3AQ96ST3 1273 aa19.8■□□□□ 0.76
C9orf139-202ENST00000623196 ESF1Q9H501 851 aaKnown RBP19.78■□□□□ 0.76
C9orf139-202ENST00000623196 BAZ1AQ9NRL2 1556 aaPredicted RBP19.77■□□□□ 0.76
C9orf139-202ENST00000623196 STAG3Q9UJ98 1225 aa19.77■□□□□ 0.76
C9orf139-202ENST00000623196 SUPT16HQ9Y5B9 1047 aaKnown RBP19.77■□□□□ 0.75
C9orf139-202ENST00000623196 MTUS2Q5JR59 1369 aa19.75■□□□□ 0.75
C9orf139-202ENST00000623196 ANP32EQ9BTT0 268 aa19.75■□□□□ 0.75
C9orf139-202ENST00000623196 RRP7BPQ9NSQ0 103 aa19.75■□□□□ 0.75
C9orf139-202ENST00000623196 DDRGK1Q96HY6 314 aa19.74■□□□□ 0.75
C9orf139-202ENST00000623196 BECN1Q14457 450 aa19.73■□□□□ 0.75
C9orf139-202ENST00000623196 SENP3-EIF4A1A0A087X0R7 540 aa19.72■□□□□ 0.75
C9orf139-202ENST00000623196 TRIM44Q96DX7 344 aaPredicted RBP19.71■□□□□ 0.75
C9orf139-202ENST00000623196 EIF4G2P78344 907 aaKnown RBP eCLIP19.7■□□□□ 0.74
C9orf139-202ENST00000623196 MYH16Q9H6N6 1097 aa19.69■□□□□ 0.74
C9orf139-202ENST00000623196 BAZ1BQ9UIG0 1483 aaKnown RBP19.69■□□□□ 0.74
C9orf139-202ENST00000623196 KDM2AQ9Y2K7 1162 aa19.68■□□□□ 0.74
C9orf139-202ENST00000623196 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.66■□□□□ 0.74
C9orf139-202ENST00000623196 TSPY4P0CV99 314 aa19.65■□□□□ 0.74
C9orf139-202ENST00000623196 TSPY10P0CW01 314 aa19.65■□□□□ 0.74
C9orf139-202ENST00000623196 KANK4Q5T7N3 995 aaPredicted RBP19.65■□□□□ 0.74
C9orf139-202ENST00000623196 WIZO95785 1651 aa19.64■□□□□ 0.74
C9orf139-202ENST00000623196 GOLGA6L22H0YM25 854 aa19.64■□□□□ 0.73
C9orf139-202ENST00000623196 KIF27Q86VH2 1401 aa19.62■□□□□ 0.73
C9orf139-202ENST00000623196 NCLP19338 710 aaKnown RBP19.62■□□□□ 0.73
C9orf139-202ENST00000623196 VPS8Q8N3P4 1428 aa19.6■□□□□ 0.73
C9orf139-202ENST00000623196 CCNB3Q8WWL7 1395 aa19.6■□□□□ 0.73
C9orf139-202ENST00000623196 PPM1GO15355 546 aaPredicted RBP19.59■□□□□ 0.73
C9orf139-202ENST00000623196 ERICH6BQ5W0A0 696 aa19.59■□□□□ 0.73
C9orf139-202ENST00000623196 TNNT2P45379 298 aaPredicted RBP19.55■□□□□ 0.72
C9orf139-202ENST00000623196 CDK11BP21127 795 aaKnown RBP19.53■□□□□ 0.72
C9orf139-202ENST00000623196 NPM1P06748 294 aaKnown RBP eCLIP19.53■□□□□ 0.72
C9orf139-202ENST00000623196 RUSC2Q8N2Y8 1516 aa19.5■□□□□ 0.71
C9orf139-202ENST00000623196 PTMAP06454 111 aaKnown RBP19.49■□□□□ 0.71
C9orf139-202ENST00000623196 PPP4R2Q9NY27 417 aa19.45■□□□□ 0.7
C9orf139-202ENST00000623196 DNTTIP2Q5QJE6 756 aaKnown RBP19.43■□□□□ 0.7
C9orf139-202ENST00000623196 PLPPR3Q6T4P5 718 aa19.42■□□□□ 0.7
C9orf139-202ENST00000623196 ZRSR1Q15695 479 aaKnown RBP19.41■□□□□ 0.7
C9orf139-202ENST00000623196 CFAP53Q96M91 514 aa19.4■□□□□ 0.7
C9orf139-202ENST00000623196 KCNH8Q96L42 1107 aa19.4■□□□□ 0.7
C9orf139-202ENST00000623196 RAB3GAP2Q9H2M9 1393 aa19.39■□□□□ 0.7
C9orf139-202ENST00000623196 NOP58Q9Y2X3 529 aaKnown RBP19.39■□□□□ 0.7
C9orf139-202ENST00000623196 LAS1LQ9Y4W2 734 aaKnown RBP19.39■□□□□ 0.7
C9orf139-202ENST00000623196 TOP2AP11388 1531 aaKnown RBP19.38■□□□□ 0.69
C9orf139-202ENST00000623196 SETD5Q9C0A6 1442 aa19.38■□□□□ 0.69
C9orf139-202ENST00000623196 NAP1L5Q96NT1 182 aaPredicted RBP19.38■□□□□ 0.69
C9orf139-202ENST00000623196 B4GALNT3Q6L9W6 998 aa19.38■□□□□ 0.69
C9orf139-202ENST00000623196 CDCA8Q53HL2 280 aa19.37■□□□□ 0.69
C9orf139-202ENST00000623196 CUX2O14529 1486 aa19.37■□□□□ 0.69
C9orf139-202ENST00000623196 CARMIL1Q5VZK9 1371 aa19.37■□□□□ 0.69
C9orf139-202ENST00000623196 KNSTRNQ9Y448 316 aa19.37■□□□□ 0.69
C9orf139-202ENST00000623196 CASC1Q6TDU7 716 aa19.36■□□□□ 0.69
C9orf139-202ENST00000623196 FTSJ3Q8IY81 847 aaKnown RBP19.36■□□□□ 0.69
C9orf139-202ENST00000623196 RAPGEF2Q9Y4G8 1499 aa19.36■□□□□ 0.69
C9orf139-202ENST00000623196 RTN4Q9NQC3 1192 aaKnown RBP19.36■□□□□ 0.69
C9orf139-202ENST00000623196 TSHZ2Q9NRE2 1034 aa19.36■□□□□ 0.69
C9orf139-202ENST00000623196 RBM19Q9Y4C8 960 aaKnown RBP19.35■□□□□ 0.69
C9orf139-202ENST00000623196 RGL3Q3MIN7 710 aa19.34■□□□□ 0.69
C9orf139-202ENST00000623196 RGS3P49796 1198 aa19.33■□□□□ 0.69
C9orf139-202ENST00000623196 CCER2I3L3R5 266 aa19.3■□□□□ 0.68
C9orf139-202ENST00000623196 DHX57Q6P158 1386 aaKnown RBP19.29■□□□□ 0.68
C9orf139-202ENST00000623196 FHAD1B1AJZ9 1412 aa19.29■□□□□ 0.68
C9orf139-202ENST00000623196 CARD11Q9BXL7 1154 aa19.29■□□□□ 0.68
C9orf139-202ENST00000623196 FOXD1Q16676 465 aa19.28■□□□□ 0.68
C9orf139-202ENST00000623196 CHMP7Q8WUX9 453 aaPredicted RBP19.28■□□□□ 0.68
C9orf139-202ENST00000623196 HSPA5P11021 654 aaKnown RBP19.28■□□□□ 0.68
C9orf139-202ENST00000623196 NEUROD2Q15784 382 aa19.26■□□□□ 0.67
C9orf139-202ENST00000623196 CFDP1Q9UEE9 299 aaPredicted RBP19.25■□□□□ 0.67
C9orf139-202ENST00000623196 TIMELESSQ9UNS1 1208 aa19.25■□□□□ 0.67
C9orf139-202ENST00000623196 PLCB2Q00722 1185 aa19.24■□□□□ 0.67
C9orf139-202ENST00000623196 TPRNQ4KMQ1 711 aa19.24■□□□□ 0.67
C9orf139-202ENST00000623196 PPP1R15AO75807 674 aaPredicted RBP19.23■□□□□ 0.67
C9orf139-202ENST00000623196 A0A0G2JS52 829 aa19.23■□□□□ 0.67
C9orf139-202ENST00000623196 C14orf37Q86TY3 774 aa19.22■□□□□ 0.67
C9orf139-202ENST00000623196 FRAT1Q92837 279 aaPredicted RBP19.22■□□□□ 0.67
C9orf139-202ENST00000623196 CHMP4BQ9H444 224 aaKnown RBP19.22■□□□□ 0.67
C9orf139-202ENST00000623196 MAPK8IP3Q9UPT6 1336 aa19.22■□□□□ 0.67
C9orf139-202ENST00000623196 PLEKHD1A6NEE1 506 aa19.22■□□□□ 0.67
C9orf139-202ENST00000623196 NUDCQ9Y266 331 aa19.21■□□□□ 0.67
C9orf139-202ENST00000623196 ZBTB7CA1YPR0 619 aa19.21■□□□□ 0.67
C9orf139-202ENST00000623196 HSP90AB1P08238 724 aaKnown RBP19.21■□□□□ 0.67
C9orf139-202ENST00000623196 MS4A1P11836 297 aa19.21■□□□□ 0.67
C9orf139-202ENST00000623196 ARHGAP35Q9NRY4 1499 aa19.2■□□□□ 0.66
C9orf139-202ENST00000623196 SENP3Q9H4L4 574 aaPredicted RBP19.18■□□□□ 0.66
C9orf139-202ENST00000623196 NRDCO43847 1150 aa19.17■□□□□ 0.66
C9orf139-202ENST00000623196 DEKP35659 375 aaKnown RBP19.17■□□□□ 0.66
C9orf139-202ENST00000623196 L1TD1Q5T7N2 865 aaKnown RBP19.15■□□□□ 0.66
C9orf139-202ENST00000623196 SMARCA4P51532 1647 aa19.15■□□□□ 0.66
C9orf139-202ENST00000623196 PLEKHG5O94827 1062 aa19.15■□□□□ 0.66
C9orf139-202ENST00000623196 GOLGA6L6A8MZA4 724 aa19.14■□□□□ 0.65
C9orf139-202ENST00000623196 EIF4G1Q04637 1599 aaKnown RBP19.12■□□□□ 0.65
C9orf139-202ENST00000623196 HSCBQ8IWL3 235 aa19.12■□□□□ 0.65
C9orf139-202ENST00000623196 CC2D1BQ5T0F9 858 aaKnown RBP19.11■□□□□ 0.65
C9orf139-202ENST00000623196 CHAF1AQ13111 956 aaPredicted RBP19.1■□□□□ 0.65
C9orf139-202ENST00000623196 FGD1P98174 961 aa19.1■□□□□ 0.65
C9orf139-202ENST00000623196 SMARCA2P51531 1590 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms