RNA–Protein interactions for RNA: ENST00000622827.4

CDH23-214, Transcript of cadherin related 23, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDH23, Length 11,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-214ENST00000622827 GOLGA6L6A8MZA4 724 aa18.9■□□□□ 0.62
CDH23-214ENST00000622827 P3H3Q8IVL6 736 aa18.9■□□□□ 0.62
CDH23-214ENST00000622827 TPRNQ4KMQ1 711 aa18.9■□□□□ 0.62
CDH23-214ENST00000622827 FBLN2P98095 1184 aa18.86■□□□□ 0.61
CDH23-214ENST00000622827 DEKP35659 375 aaKnown RBP18.83■□□□□ 0.61
CDH23-214ENST00000622827 STAG3Q9UJ98 1225 aa18.81■□□□□ 0.6
CDH23-214ENST00000622827 NRDCO43847 1150 aa18.8■□□□□ 0.6
CDH23-214ENST00000622827 MSNP26038 577 aaKnown RBP18.79■□□□□ 0.6
CDH23-214ENST00000622827 L1TD1Q5T7N2 865 aaKnown RBP18.79■□□□□ 0.6
CDH23-214ENST00000622827 FTSJ3Q8IY81 847 aaKnown RBP18.79■□□□□ 0.6
CDH23-214ENST00000622827 CHGAP10645 457 aaKnown RBP18.78■□□□□ 0.6
CDH23-214ENST00000622827 ESF1Q9H501 851 aaKnown RBP18.77■□□□□ 0.59
CDH23-214ENST00000622827 ARID4BQ4LE39 1312 aaPredicted RBP18.75■□□□□ 0.59
CDH23-214ENST00000622827 PLCB2Q00722 1185 aa18.75■□□□□ 0.59
CDH23-214ENST00000622827 HSP90AB1P08238 724 aaKnown RBP18.74■□□□□ 0.59
CDH23-214ENST00000622827 SUPT16HQ9Y5B9 1047 aaKnown RBP18.73■□□□□ 0.59
CDH23-214ENST00000622827 CSRNP3Q8WYN3 585 aa18.73■□□□□ 0.59
CDH23-214ENST00000622827 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.71■□□□□ 0.59
CDH23-214ENST00000622827 SCRIBQ14160 1630 aa18.7■□□□□ 0.58
CDH23-214ENST00000622827 PPP4R2Q9NY27 417 aa18.7■□□□□ 0.58
CDH23-214ENST00000622827 HIRIP3Q9BW71 556 aaPredicted RBP18.69■□□□□ 0.58
CDH23-214ENST00000622827 KDM2AQ9Y2K7 1162 aa18.68■□□□□ 0.58
CDH23-214ENST00000622827 RGS3P49796 1198 aa18.67■□□□□ 0.58
CDH23-214ENST00000622827 TULP1O00294 542 aaPredicted RBP18.66■□□□□ 0.58
CDH23-214ENST00000622827 EIF4G2P78344 907 aaKnown RBP eCLIP18.65■□□□□ 0.58
CDH23-214ENST00000622827 HSCBQ8IWL3 235 aa18.64■□□□□ 0.58
CDH23-214ENST00000622827 ARID3AQ99856 593 aa18.64■□□□□ 0.57
CDH23-214ENST00000622827 DRC7Q8IY82 874 aa18.63■□□□□ 0.57
CDH23-214ENST00000622827 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.63■□□□□ 0.57
CDH23-214ENST00000622827 CHIC2Q9UKJ5 165 aa18.6■□□□□ 0.57
CDH23-214ENST00000622827 TNNT3P45378 269 aaPredicted RBP18.6■□□□□ 0.57
CDH23-214ENST00000622827 GOLGA6L4A6NEF3 574 aa18.57■□□□□ 0.56
CDH23-214ENST00000622827 A0A0G2JS52 829 aa18.57■□□□□ 0.56
CDH23-214ENST00000622827 PABPN1Q86U42 306 aaKnown RBP eCLIP18.57■□□□□ 0.56
CDH23-214ENST00000622827 FGD1P98174 961 aa18.56■□□□□ 0.56
CDH23-214ENST00000622827 SENP3-EIF4A1A0A087X0R7 540 aa18.55■□□□□ 0.56
CDH23-214ENST00000622827 PNNQ9H307 717 aaKnown RBP18.54■□□□□ 0.56
CDH23-214ENST00000622827 KIAA2012Q0VF49 1180 aa18.53■□□□□ 0.56
CDH23-214ENST00000622827 CFAP53Q96M91 514 aa18.53■□□□□ 0.56
CDH23-214ENST00000622827 KAT6BQ8WYB5 2073 aa18.53■□□□□ 0.56
CDH23-214ENST00000622827 B4GALNT3Q6L9W6 998 aa18.52■□□□□ 0.56
CDH23-214ENST00000622827 PLPPR3Q6T4P5 718 aa18.52■□□□□ 0.56
CDH23-214ENST00000622827 TAOK2Q9UL54 1235 aa18.52■□□□□ 0.56
CDH23-214ENST00000622827 KNSTRNQ9Y448 316 aa18.5■□□□□ 0.55
CDH23-214ENST00000622827 KCNJ4P48050 445 aa18.5■□□□□ 0.55
CDH23-214ENST00000622827 MTUS2Q5JR59 1369 aa18.5■□□□□ 0.55
CDH23-214ENST00000622827 ABCC9O60706 1549 aa18.5■□□□□ 0.55
CDH23-214ENST00000622827 CLIP1P30622 1438 aa18.49■□□□□ 0.55
CDH23-214ENST00000622827 NOC3LQ8WTT2 800 aaKnown RBP18.49■□□□□ 0.55
CDH23-214ENST00000622827 SPRYD3Q8NCJ5 442 aa18.48■□□□□ 0.55
CDH23-214ENST00000622827 NAP1L2Q9ULW6 460 aaPredicted RBP18.48■□□□□ 0.55
CDH23-214ENST00000622827 PTMSP20962 102 aa18.48■□□□□ 0.55
CDH23-214ENST00000622827 ZBTB7CA1YPR0 619 aa18.47■□□□□ 0.55
CDH23-214ENST00000622827 CHMP4BQ9H444 224 aaKnown RBP18.47■□□□□ 0.55
CDH23-214ENST00000622827 RBM19Q9Y4C8 960 aaKnown RBP18.46■□□□□ 0.55
CDH23-214ENST00000622827 GBP4Q96PP9 640 aa18.45■□□□□ 0.54
CDH23-214ENST00000622827 FRAT1Q92837 279 aaPredicted RBP18.44■□□□□ 0.54
CDH23-214ENST00000622827 C14orf37Q86TY3 774 aa18.43■□□□□ 0.54
CDH23-214ENST00000622827 OS9Q13438 667 aaPredicted RBP18.43■□□□□ 0.54
CDH23-214ENST00000622827 MCCP23508 829 aa18.42■□□□□ 0.54
CDH23-214ENST00000622827 MS4A1P11836 297 aa18.42■□□□□ 0.54
CDH23-214ENST00000622827 GOLGA6L1Q8N7Z2 621 aa18.41■□□□□ 0.54
CDH23-214ENST00000622827 GZF1Q9H116 711 aaPredicted RBP18.4■□□□□ 0.54
CDH23-214ENST00000622827 HSP90AA2PQ14568 343 aaPredicted RBP18.4■□□□□ 0.54
CDH23-214ENST00000622827 CDCA8Q53HL2 280 aa18.4■□□□□ 0.54
CDH23-214ENST00000622827 MYO15BQ96JP2 1530 aa18.39■□□□□ 0.53
CDH23-214ENST00000622827 MAPK8IP3Q9UPT6 1336 aa18.39■□□□□ 0.53
CDH23-214ENST00000622827 CLSTN1O94985 981 aa18.38■□□□□ 0.53
CDH23-214ENST00000622827 SYAP1Q96A49 352 aaPredicted RBP18.36■□□□□ 0.53
CDH23-214ENST00000622827 RRP7BPQ9NSQ0 103 aa18.36■□□□□ 0.53
CDH23-214ENST00000622827 RSPH6AQ9H0K4 717 aa18.36■□□□□ 0.53
CDH23-214ENST00000622827 NEUROD2Q15784 382 aa18.35■□□□□ 0.53
CDH23-214ENST00000622827 TSPY4P0CV99 314 aa18.35■□□□□ 0.53
CDH23-214ENST00000622827 TSPY10P0CW01 314 aa18.35■□□□□ 0.53
CDH23-214ENST00000622827 PLEKHG5O94827 1062 aa18.34■□□□□ 0.53
CDH23-214ENST00000622827 GNL2Q13823 731 aaKnown RBP18.34■□□□□ 0.53
CDH23-214ENST00000622827 ZCCHC6Q5VYS8 1495 aaKnown RBP18.33■□□□□ 0.52
CDH23-214ENST00000622827 GOLGA6L3A6NEY3 463 aa18.33■□□□□ 0.52
CDH23-214ENST00000622827 SENP3Q9H4L4 574 aaPredicted RBP18.32■□□□□ 0.52
CDH23-214ENST00000622827 CEP162Q5TB80 1403 aa18.3■□□□□ 0.52
CDH23-214ENST00000622827 PPP1R15AO75807 674 aaPredicted RBP18.3■□□□□ 0.52
CDH23-214ENST00000622827 SLKQ9H2G2 1235 aaPredicted RBP18.3■□□□□ 0.52
CDH23-214ENST00000622827 RSF1Q96T23 1441 aaPredicted RBP18.3■□□□□ 0.52
CDH23-214ENST00000622827 SETQ01105 290 aaPredicted RBP18.3■□□□□ 0.52
CDH23-214ENST00000622827 CFAP44Q96MT7 982 aa18.29■□□□□ 0.52
CDH23-214ENST00000622827 GOLGA3Q08378 1498 aa18.28■□□□□ 0.52
CDH23-214ENST00000622827 NCBP3Q53F19 620 aaKnown RBP18.28■□□□□ 0.52
CDH23-214ENST00000622827 GOLGA2Q08379 1002 aa18.26■□□□□ 0.51
CDH23-214ENST00000622827 A0A0U1RQG5 324 aaPredicted RBP18.26■□□□□ 0.51
CDH23-214ENST00000622827 USP35Q9P2H5 1018 aa18.25■□□□□ 0.51
CDH23-214ENST00000622827 KIAA1211Q6ZU35 1233 aa18.24■□□□□ 0.51
CDH23-214ENST00000622827 NUDCQ9Y266 331 aa18.24■□□□□ 0.51
CDH23-214ENST00000622827 CARD11Q9BXL7 1154 aa18.24■□□□□ 0.51
CDH23-214ENST00000622827 PHF14O94880 888 aa18.23■□□□□ 0.51
CDH23-214ENST00000622827 CC2D1BQ5T0F9 858 aaKnown RBP18.23■□□□□ 0.51
CDH23-214ENST00000622827 TPM4P67936 248 aa18.22■□□□□ 0.51
CDH23-214ENST00000622827 RGL3Q3MIN7 710 aa18.2■□□□□ 0.5
CDH23-214ENST00000622827 IPO9Q96P70 1041 aaKnown RBP18.2■□□□□ 0.5
CDH23-214ENST00000622827 CALRP27797 417 aaKnown RBP18.2■□□□□ 0.5
CDH23-214ENST00000622827 HTATSF1O43719 755 aaKnown RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms